| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is hemH [H]
Identifier: 88607381
GI number: 88607381
Start: 263637
End: 264599
Strand: Reverse
Name: hemH [H]
Synonym: APH_0263
Alternate gene names: 88607381
Gene position: 264599-263637 (Counterclockwise)
Preceding gene: 88606740
Following gene: 88607848
Centisome position: 17.98
GC content: 39.77
Gene sequence:
>963_bases ATGTCTAGAAAAATTGCTGTTGTTTTGTTTAATCTTGGTGGTCCTGCTTCCTTGCGAGAGGTAGAATCTTTTCTATTTAA CATGTTCAATGATAGTCATATTGTTAGCGCGCCAAGGCCTTTCAGGTACTTTTTAGCAAAGGCAATTTCCAAGCTAAGAG CGCGATCTTCTCGCGAGATTTACACGCTAATGGGTGGCAAGTCTATTGTAGAGCAGGAAACTGCAAAACAAGCTATCGCG TTAGAAGAACTATTGAATAAAAATGCTGAGACTGGATGCTCATATAAAGTGTTTACCTGCATGCGCTACTCCGCACCAAA CGCACTTACGGTGTTAGGTGACATTGATGAATATAAACCATGCAAAGTAGTTCTATTACCTATGTATCCGCAATATTCAT CAGCTACCACACAATCGTCCATAGAAGATTGGTTTAGTACATCTCACAAAGCGGGATACAGTTTTTGGACTGATATTATT TGGGATTATCATAGTGATGAGCATTTCATTGCGGCACATTGTAAACTAATATCAGAGGCCTATGAAAAGGCACTAGCTTT GAATGCACGAGCAAGGATTCTTTTCTCAGCACACAGTTTACCAGTATCATTTATTGAAAAGGGTGATCCTTACAAACAGC AACTGCGGCAAACCGTGCTGTCTATATTGCAAAACATGGGTTTACAGTCTATAGATAACACTCTTTGTTATCAGAGTAAA CTTGGACCAGTGCGCTGGTTAGAGCCCAGCACAAAGTCTGAACTTCTCAGAGCCTGCAATGATAATGTATCTGTAGTTCT TGTCCCTATAGCATTCGTTTCTGAAAACTCTGAAACGCTTGTTGAACTTGATATAGAATACAAAGCCTTGGTGGGAGAAA AGAAGTTCATTAGAGTCCCTACTCTGGGAACAGATCCAAAATTTATAGAGTGTTTGTGCAATCTCGTATTAGCTAAACAG TAA
Upstream 100 bases:
>100_bases GTGTTTTCAGGCGCACTGCTTCTTTTTAAAAGGTGATATTGCTGGCATTAAGCGAGCGCTGTAGCTACAATAATTATGCT CATGTGTAAGGTGTCACCTG
Downstream 100 bases:
>100_bases GGCTCTATTTTTGATGGGGCTTATGTCTTTTAACTGGATTTATGAGTTACCATGCTGCAGACCCCATTTCTGATAATCTT GACATCGCGCGTTTTATATC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSRKIAVVLFNLGGPASLREVESFLFNMFNDSHIVSAPRPFRYFLAKAISKLRARSSREIYTLMGGKSIVEQETAKQAIA LEELLNKNAETGCSYKVFTCMRYSAPNALTVLGDIDEYKPCKVVLLPMYPQYSSATTQSSIEDWFSTSHKAGYSFWTDII WDYHSDEHFIAAHCKLISEAYEKALALNARARILFSAHSLPVSFIEKGDPYKQQLRQTVLSILQNMGLQSIDNTLCYQSK LGPVRWLEPSTKSELLRACNDNVSVVLVPIAFVSENSETLVELDIEYKALVGEKKFIRVPTLGTDPKFIECLCNLVLAKQ
Sequences:
>Translated_320_residues MSRKIAVVLFNLGGPASLREVESFLFNMFNDSHIVSAPRPFRYFLAKAISKLRARSSREIYTLMGGKSIVEQETAKQAIA LEELLNKNAETGCSYKVFTCMRYSAPNALTVLGDIDEYKPCKVVLLPMYPQYSSATTQSSIEDWFSTSHKAGYSFWTDII WDYHSDEHFIAAHCKLISEAYEKALALNARARILFSAHSLPVSFIEKGDPYKQQLRQTVLSILQNMGLQSIDNTLCYQSK LGPVRWLEPSTKSELLRACNDNVSVVLVPIAFVSENSETLVELDIEYKALVGEKKFIRVPTLGTDPKFIECLCNLVLAKQ >Mature_319_residues SRKIAVVLFNLGGPASLREVESFLFNMFNDSHIVSAPRPFRYFLAKAISKLRARSSREIYTLMGGKSIVEQETAKQAIAL EELLNKNAETGCSYKVFTCMRYSAPNALTVLGDIDEYKPCKVVLLPMYPQYSSATTQSSIEDWFSTSHKAGYSFWTDIIW DYHSDEHFIAAHCKLISEAYEKALALNARARILFSAHSLPVSFIEKGDPYKQQLRQTVLSILQNMGLQSIDNTLCYQSKL GPVRWLEPSTKSELLRACNDNVSVVLVPIAFVSENSETLVELDIEYKALVGEKKFIRVPTLGTDPKFIECLCNLVLAKQ
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=325, Percent_Identity=31.0769230769231, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI60499025, Length=325, Percent_Identity=31.0769230769231, Blast_Score=136, Evalue=2e-32, Organism=Escherichia coli, GI1786681, Length=330, Percent_Identity=24.2424242424242, Blast_Score=78, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6324750, Length=320, Percent_Identity=28.4375, Blast_Score=130, Evalue=2e-31, Organism=Drosophila melanogaster, GI17864156, Length=323, Percent_Identity=31.5789473684211, Blast_Score=150, Evalue=9e-37, Organism=Drosophila melanogaster, GI24651774, Length=253, Percent_Identity=29.6442687747036, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI45552018, Length=129, Percent_Identity=40.3100775193798, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 36047; Mature: 35916
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKIAVVLFNLGGPASLREVESFLFNMFNDSHIVSAPRPFRYFLAKAISKLRARSSREI CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCE YTLMGGKSIVEQETAKQAIALEELLNKNAETGCSYKVFTCMRYSAPNALTVLGDIDEYKP EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCC CKVVLLPMYPQYSSATTQSSIEDWFSTSHKAGYSFWTDIIWDYHSDEHFIAAHCKLISEA CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH YEKALALNARARILFSAHSLPVSFIEKGDPYKQQLRQTVLSILQNMGLQSIDNTLCYQSK HHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC LGPVRWLEPSTKSELLRACNDNVSVVLVPIAFVSENSETLVELDIEYKALVGEKKFIRVP CCCEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECHHHHHCCCCEEEECC TLGTDPKFIECLCNLVLAKQ CCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SRKIAVVLFNLGGPASLREVESFLFNMFNDSHIVSAPRPFRYFLAKAISKLRARSSREI CCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCE YTLMGGKSIVEQETAKQAIALEELLNKNAETGCSYKVFTCMRYSAPNALTVLGDIDEYKP EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCC CKVVLLPMYPQYSSATTQSSIEDWFSTSHKAGYSFWTDIIWDYHSDEHFIAAHCKLISEA CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH YEKALALNARARILFSAHSLPVSFIEKGDPYKQQLRQTVLSILQNMGLQSIDNTLCYQSK HHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC LGPVRWLEPSTKSELLRACNDNVSVVLVPIAFVSENSETLVELDIEYKALVGEKKFIRVP CCCEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEECHHHHHCCCCEEEECC TLGTDPKFIECLCNLVLAKQ CCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA