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The map label for this gene is yebC [C]

Identifier: 88607363

GI number: 88607363

Start: 507265

End: 508002

Strand: Reverse

Name: yebC [C]

Synonym: APH_0480

Alternate gene names: 88607363

Gene position: 508002-507265 (Counterclockwise)

Preceding gene: 88606894

Following gene: 88607056

Centisome position: 34.53

GC content: 45.26

Gene sequence:

>738_bases
ATGGCTGGTCATTCACAGTTTGCGAACATCAAACACAGAAAGGGCGCGCAAGATGCCAAGCGTGCTAAGCTGTTCACAAA
ATTGAGGAAGGAAATCATAGTAGCGGCTAGGAGTGGTTCTCCCGTTCCGGAATTGAACCCTAATCTAAGGTCTGCAATAG
CCTCTGCCAAGGCTTTTAATCTTCCTAAAGACCGTATAGAGGCTGCTATACGAAGCGCTCAGGGCAATGAGGCTGATGAT
AGCTATGAGGAAATAACGTATGAAGGTTATGGTCCTGGTAGTGTCGCTATAGTAGTGCATGCTTTGAGCAACAATAGAAA
TCGCACTGCTGGGGAGCTACGCCATATATTTACGCGGCACGGAGGAAAGCTCGGAGAGAGAGGAAGCATAAGTTATCTGT
TTGATCATGTGGGGCTAATAGTTTATGGTGCTGCGCAGGTTGGAAGCTTTGATGTGATTTTTGATGAGGCTACTAGCCTC
GGGGCTATAGATCTTGAAGAACACGACAATGGCGAGGAGAAGGAGTATCACGTAATTTGCCAAGTTGAAGATTTTGGCAG
AATCAGAGATGCTTTGTATGAGAAGTTTTCTGATGGTGTGACTGCTCGTCTCTCTTGGCGTCCTAAACAAAAAGTTAAAC
CTGCATCCGACGAAGCTTCTGCTAAACTTATCAGTTTCCTGAATGATCTGGATGATAATGATGATGTCCAGTATGTTGAG
GGCGATTTCGAGTTGTAA

Upstream 100 bases:

>100_bases
ATACAAACATATAATTAGTATTGCATATATTGGTTATAGGTCTTAGACTAAGTGGTATCTCGTGTATACATACCATGTGC
TTAGCGTTGTAGGATGAGTT

Downstream 100 bases:

>100_bases
ATTGACGCGTTGTTAGTGCCTCGCTGGTTGTGGCGGTATCTTTTGTAACTTGCTTTTATATGTGACATCTGTTAGTATTC
TGGCAGTCGCTTAGCTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFNLPKDRIEAAIRSAQGNEADD
SYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRHGGKLGERGSISYLFDHVGLIVYGAAQVGSFDVIFDEATSL
GAIDLEEHDNGEEKEYHVICQVEDFGRIRDALYEKFSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDVQYVE
GDFEL

Sequences:

>Translated_245_residues
MAGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFNLPKDRIEAAIRSAQGNEADD
SYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRHGGKLGERGSISYLFDHVGLIVYGAAQVGSFDVIFDEATSL
GAIDLEEHDNGEEKEYHVICQVEDFGRIRDALYEKFSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDVQYVE
GDFEL
>Mature_244_residues
AGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFNLPKDRIEAAIRSAQGNEADDS
YEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRHGGKLGERGSISYLFDHVGLIVYGAAQVGSFDVIFDEATSLG
AIDLEEHDNGEEKEYHVICQVEDFGRIRDALYEKFSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDVQYVEG
DFEL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=252, Percent_Identity=30.1587301587302, Blast_Score=111, Evalue=6e-25,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=41.8410041841004, Blast_Score=184, Evalue=4e-48,
Organism=Escherichia coli, GI1788294, Length=137, Percent_Identity=40.8759124087591, Blast_Score=114, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6321458, Length=260, Percent_Identity=28.8461538461538, Blast_Score=92, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24583305, Length=179, Percent_Identity=30.1675977653631, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y480_ANAPZ (Q2GKM2)

Other databases:

- EMBL:   CP000235
- RefSeq:   YP_505079.1
- STRING:   Q2GKM2
- GeneID:   3930251
- GenomeReviews:   CP000235_GR
- KEGG:   aph:APH_0480
- NMPDR:   fig|212042.5.peg.477
- TIGR:   APH_0480
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   NDDVQYV
- ProtClustDB:   PRK00110
- BioCyc:   APHA212042:APH_0480-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27051; Mature: 26920

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFN
CCCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCC
LPKDRIEAAIRSAQGNEADDSYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRH
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGKLGERGSISYLFDHVGLIVYGAAQVGSFDVIFDEATSLGAIDLEEHDNGEEKEYHVIC
CCCCCCCCCHHHHHHHHHEEEEECHHCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEE
QVEDFGRIRDALYEKFSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDVQYVE
EEHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEC
GDFEL
CCCCC
>Mature Secondary Structure 
AGHSQFANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFN
CCCHHHHCCHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHCC
LPKDRIEAAIRSAQGNEADDSYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRH
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHC
GGKLGERGSISYLFDHVGLIVYGAAQVGSFDVIFDEATSLGAIDLEEHDNGEEKEYHVIC
CCCCCCCCCHHHHHHHHHEEEEECHHCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEEE
QVEDFGRIRDALYEKFSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDVQYVE
EEHHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEC
GDFEL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA