Click here to switch to the map view.

The map label for this gene is 88606894

Identifier: 88606894

GI number: 88606894

Start: 512519

End: 513934

Strand: Reverse

Name: 88606894

Synonym: APH_0485

Alternate gene names: NA

Gene position: 513934-512519 (Counterclockwise)

Preceding gene: 88607205

Following gene: 88607363

Centisome position: 34.93

GC content: 36.09

Gene sequence:

>1416_bases
TTGGAAAAAACTGCTATAGGTGATGCATCACCTGATCACCTTAAAAAGCCAGACGTTACTAACTCGTCAGCAAACACAGC
TGCTTTGCAGGATGCGCTACGCTCACATAAGAAAGATACTAGATATTCAGACAAGGTATATATCTTTTTCTCTGAAGAAG
AAAAGAAGGGCATTGTAACTTTATATGAATCGTCCATCCAGAGCATACAAATCTATAGCAACAGTTCAGAGAATTTAGAC
ACCCAATATACAATGGTAGCCATATTGAACAAAATTACCGTTGGGCAAGATAAAAAACGAAAAGCCTCACGGAATATAAG
TATTCGTGCTTTTCATCATGAATGGGAAAATAAAGATTTCCAGAACATCAAGCCTGAAATAACCTTGATAGCCGCGGGAA
AAGACTATAACACACGTACTGAAACTTACTTCTCTCCTCCAAAAAATCAATCCATACCTTTAATAGGTATAAGCACTAGT
AAATACGTAGAGTATCGCCCAATGATTGAAAAACACAGCAAAACTTTCCTTGAAAAAGCCTTACCGCTGCACATTAATAA
AAAGTCCATTATAACAACAATATTAGAGAGTTATATCCTAAAAAAAAATTCTAGAGCTAACACTAAAGTAGCTATTTATC
TGGTAGAAAATTTTCTCCCACTTATCCCAAAAACAACCTTAGCAGCATTGAAGAAGGGAGCGCTAAAGCTAAAACGTATA
TGCTTAGAAGAAGGGAGCAACACTACTGATTTAAGTGAAGTAGATAGATTATGCCTGTCCTTAAATTCAGCTTCTTTTTC
TGCACCTTACTCTATTACTGAAACAAATACCAAAGCCTTAAAAGAAGAAGTATTCCATTTAATAAAGGAAAGGGCATGCC
AATATGAACACCTGCACGAAGCCTTAAGTAAAGACGCGTATAAGAGTATAATCTCTGTAGATTTAGAGGAAATAGTAGCC
TGCTATACCAACAAGTCTAATCAATTTACGAGTACATTATTAAAAAAGTGCATCTCCGCAAATAAGAATTTATCCCACAA
AATGGCTATAGTACATAGATATATAGATGAGCTTAAAAAACGCTCTGTGAACAATAATGCCAAACCTTTGATATTAGATT
GCCAATTACCTTGCGCTGGCGAAGATTTCACATTCGCTCACAATTCCCTTATATCTCTTGCAAAGAAGAATGCTCCTCAA
GAAGTTGAATTCTGTGTGGACCACATTATAGAAGAGGCAAAAAGACAAGTGGCTGAAAAATATAGCACGATATTCCTGCG
TGATGTTATGGGTATAACAGAAAAAGTCTCAGCACACGTGAATAAGATGTCTGTTAAGATAAATAAGATGCAACATAATG
ACGAACTACAAGCTTCAGTGCCCCATAATAGCACCGAAAGCTGTAATCTCATATAA

Upstream 100 bases:

>100_bases
TTAACTTGTAGTGTACTCCGTTAAAAATGACCTTATGGTAATATACATGAACCTTGGAAAGAAGCCGCTACTTAGAAAAC
CACAAACCACTCCCTTTATT

Downstream 100 bases:

>100_bases
CGCTTATTGAATATGATGGACAAGAAGGAGGTCTGAGATTAGTCACGTGTTCCCCAAAAATGATAGAGCTCCATGGCATA
GTGCAGCCCTTTATGTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MEKTAIGDASPDHLKKPDVTNSSANTAALQDALRSHKKDTRYSDKVYIFFSEEEKKGIVTLYESSIQSIQIYSNSSENLD
TQYTMVAILNKITVGQDKKRKASRNISIRAFHHEWENKDFQNIKPEITLIAAGKDYNTRTETYFSPPKNQSIPLIGISTS
KYVEYRPMIEKHSKTFLEKALPLHINKKSIITTILESYILKKNSRANTKVAIYLVENFLPLIPKTTLAALKKGALKLKRI
CLEEGSNTTDLSEVDRLCLSLNSASFSAPYSITETNTKALKEEVFHLIKERACQYEHLHEALSKDAYKSIISVDLEEIVA
CYTNKSNQFTSTLLKKCISANKNLSHKMAIVHRYIDELKKRSVNNNAKPLILDCQLPCAGEDFTFAHNSLISLAKKNAPQ
EVEFCVDHIIEEAKRQVAEKYSTIFLRDVMGITEKVSAHVNKMSVKINKMQHNDELQASVPHNSTESCNLI

Sequences:

>Translated_471_residues
MEKTAIGDASPDHLKKPDVTNSSANTAALQDALRSHKKDTRYSDKVYIFFSEEEKKGIVTLYESSIQSIQIYSNSSENLD
TQYTMVAILNKITVGQDKKRKASRNISIRAFHHEWENKDFQNIKPEITLIAAGKDYNTRTETYFSPPKNQSIPLIGISTS
KYVEYRPMIEKHSKTFLEKALPLHINKKSIITTILESYILKKNSRANTKVAIYLVENFLPLIPKTTLAALKKGALKLKRI
CLEEGSNTTDLSEVDRLCLSLNSASFSAPYSITETNTKALKEEVFHLIKERACQYEHLHEALSKDAYKSIISVDLEEIVA
CYTNKSNQFTSTLLKKCISANKNLSHKMAIVHRYIDELKKRSVNNNAKPLILDCQLPCAGEDFTFAHNSLISLAKKNAPQ
EVEFCVDHIIEEAKRQVAEKYSTIFLRDVMGITEKVSAHVNKMSVKINKMQHNDELQASVPHNSTESCNLI
>Mature_471_residues
MEKTAIGDASPDHLKKPDVTNSSANTAALQDALRSHKKDTRYSDKVYIFFSEEEKKGIVTLYESSIQSIQIYSNSSENLD
TQYTMVAILNKITVGQDKKRKASRNISIRAFHHEWENKDFQNIKPEITLIAAGKDYNTRTETYFSPPKNQSIPLIGISTS
KYVEYRPMIEKHSKTFLEKALPLHINKKSIITTILESYILKKNSRANTKVAIYLVENFLPLIPKTTLAALKKGALKLKRI
CLEEGSNTTDLSEVDRLCLSLNSASFSAPYSITETNTKALKEEVFHLIKERACQYEHLHEALSKDAYKSIISVDLEEIVA
CYTNKSNQFTSTLLKKCISANKNLSHKMAIVHRYIDELKKRSVNNNAKPLILDCQLPCAGEDFTFAHNSLISLAKKNAPQ
EVEFCVDHIIEEAKRQVAEKYSTIFLRDVMGITEKVSAHVNKMSVKINKMQHNDELQASVPHNSTESCNLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53325; Mature: 53325

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTAIGDASPDHLKKPDVTNSSANTAALQDALRSHKKDTRYSDKVYIFFSEEEKKGIVT
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEE
LYESSIQSIQIYSNSSENLDTQYTMVAILNKITVGQDKKRKASRNISIRAFHHEWENKDF
EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCHHCCCCC
QNIKPEITLIAAGKDYNTRTETYFSPPKNQSIPLIGISTSKYVEYRPMIEKHSKTFLEKA
CCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHC
LPLHINKKSIITTILESYILKKNSRANTKVAIYLVENFLPLIPKTTLAALKKGALKLKRI
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHH
CLEEGSNTTDLSEVDRLCLSLNSASFSAPYSITETNTKALKEEVFHLIKERACQYEHLHE
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ALSKDAYKSIISVDLEEIVACYTNKSNQFTSTLLKKCISANKNLSHKMAIVHRYIDELKK
HHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RSVNNNAKPLILDCQLPCAGEDFTFAHNSLISLAKKNAPQEVEFCVDHIIEEAKRQVAEK
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YSTIFLRDVMGITEKVSAHVNKMSVKINKMQHNDELQASVPHNSTESCNLI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MEKTAIGDASPDHLKKPDVTNSSANTAALQDALRSHKKDTRYSDKVYIFFSEEEKKGIVT
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEE
LYESSIQSIQIYSNSSENLDTQYTMVAILNKITVGQDKKRKASRNISIRAFHHEWENKDF
EEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCHHCCCCC
QNIKPEITLIAAGKDYNTRTETYFSPPKNQSIPLIGISTSKYVEYRPMIEKHSKTFLEKA
CCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHC
LPLHINKKSIITTILESYILKKNSRANTKVAIYLVENFLPLIPKTTLAALKKGALKLKRI
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHH
CLEEGSNTTDLSEVDRLCLSLNSASFSAPYSITETNTKALKEEVFHLIKERACQYEHLHE
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
ALSKDAYKSIISVDLEEIVACYTNKSNQFTSTLLKKCISANKNLSHKMAIVHRYIDELKK
HHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RSVNNNAKPLILDCQLPCAGEDFTFAHNSLISLAKKNAPQEVEFCVDHIIEEAKRQVAEK
HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YSTIFLRDVMGITEKVSAHVNKMSVKINKMQHNDELQASVPHNSTESCNLI
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA