| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607166
Identifier: 88607166
GI number: 88607166
Start: 305577
End: 306008
Strand: Direct
Name: 88607166
Synonym: APH_0322
Alternate gene names: NA
Gene position: 305577-306008 (Clockwise)
Preceding gene: 88606949
Following gene: 88607307
Centisome position: 20.77
GC content: 43.52
Gene sequence:
>432_bases ATGATTTTTAAGGTTTCGACGGGTTTTTTCATTGTCATCGCGGGCTTTTTGTGTCTTGGCTTTTTGGGGCTATGCTTTAA GTTTTTGCGGGATTATGTTGAGCGATTGTTCAGCGTGCAAGATGAAGAGGAATCCCTTACTGATGAAGAGAAGCATAAGC GTTATCTTGAGAAAAAACACAGAGAGATTGCGAAGGAGAGGGTTAATGCTAAATTCTTGCATAAGAGCTCTGAAGTGCAT GCTGAATATCAGGATATTGTAAAGATTATAGGGTTGATGGAGCCTATAGGAAGATGGACGCGCTTTGTGATGTCAGAGAA GCGCCAAAAGCTTATAGGTATGAAACCTAGTCAGCTACAGAATGGGTTTTGGCAGATGCTGGTCAGCATGAAGGGGATGT ATCAGGGCAAACACAAGGGGAGGTCGCGGTGA
Upstream 100 bases:
>100_bases TGCACTGAATATACAGGTACAAGAGGCAAGCAGCCAATATCTTTCTCATTTCAGCTGCATTGTGTTAGAATAAGAGGGGG TTGTTATGTCTTGAAAAGTC
Downstream 100 bases:
>100_bases GATGTGTGGTTTGTGCTTGATTATGGATTTAGGATGGCAGTCGTAGTTTTTGGGGGATTTAGTGCATAGCTCAGAAGAAA AGGGCTTGATGAAAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MIFKVSTGFFIVIAGFLCLGFLGLCFKFLRDYVERLFSVQDEEESLTDEEKHKRYLEKKHREIAKERVNAKFLHKSSEVH AEYQDIVKIIGLMEPIGRWTRFVMSEKRQKLIGMKPSQLQNGFWQMLVSMKGMYQGKHKGRSR
Sequences:
>Translated_143_residues MIFKVSTGFFIVIAGFLCLGFLGLCFKFLRDYVERLFSVQDEEESLTDEEKHKRYLEKKHREIAKERVNAKFLHKSSEVH AEYQDIVKIIGLMEPIGRWTRFVMSEKRQKLIGMKPSQLQNGFWQMLVSMKGMYQGKHKGRSR >Mature_143_residues MIFKVSTGFFIVIAGFLCLGFLGLCFKFLRDYVERLFSVQDEEESLTDEEKHKRYLEKKHREIAKERVNAKFLHKSSEVH AEYQDIVKIIGLMEPIGRWTRFVMSEKRQKLIGMKPSQLQNGFWQMLVSMKGMYQGKHKGRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16924; Mature: 16924
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKVSTGFFIVIAGFLCLGFLGLCFKFLRDYVERLFSVQDEEESLTDEEKHKRYLEKKH CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH REIAKERVNAKFLHKSSEVHAEYQDIVKIIGLMEPIGRWTRFVMSEKRQKLIGMKPSQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NGFWQMLVSMKGMYQGKHKGRSR HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIFKVSTGFFIVIAGFLCLGFLGLCFKFLRDYVERLFSVQDEEESLTDEEKHKRYLEKKH CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH REIAKERVNAKFLHKSSEVHAEYQDIVKIIGLMEPIGRWTRFVMSEKRQKLIGMKPSQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NGFWQMLVSMKGMYQGKHKGRSR HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA