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The map label for this gene is ihfB

Identifier: 88607135

GI number: 88607135

Start: 268718

End: 269011

Strand: Reverse

Name: ihfB

Synonym: APH_0271

Alternate gene names: NA

Gene position: 269011-268718 (Counterclockwise)

Preceding gene: 88607225

Following gene: 88607869

Centisome position: 18.28

GC content: 41.84

Gene sequence:

>294_bases
TTGTTGAGATCTGATTTAATCAGGCGCATTGCAAGAAAGAATCCCACTCTTGGAGAGAGTGTGGTATCACAGATATTGAA
TGTGTTTTTTCAGTCTATTTTGCAGCACATGCATGATGATTCTAGGGTTGAGTTGCGGGGGTTTGGTTCCTTTGCATCGC
GAAGTTATGTACTAAAAAGCGCAAATGTTGCTTTGGGTAAGGTGCAGTATAAGAGAATGTACTTTCGCCCAAGTGAGAAG
TTAATCAAGGCTGTAAATCAGCCTGCACATCCTAAGAGTGGTTCCCATAGTTAG

Upstream 100 bases:

>100_bases
TATCAGAGTCGGTTAAGTTTGATGGGTGGTTTGCGTATGTTGCTTGAGTCATTCAAGCAGCCGTTATACGCATTGCTTTT
TGAATGAGAGCTGTATGACT

Downstream 100 bases:

>100_bases
TATTTGAGTTAATGGCGGGTGTTTTACTCCGCTATGTTATCTCCTAGCTTATGTAAGGCTCGGAAAGGTGGCTGATTTAG
GTAATATACATAGGTATCTT

Product: integration host factor, beta subunit

Products: NA

Alternate protein names: Integration Host Factor Beta-Subunit; Integration Host Factor

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGSFASRSYVLKSANVALGKVQYKRMYFRPSEK
LIKAVNQPAHPKSGSHS

Sequences:

>Translated_97_residues
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGSFASRSYVLKSANVALGKVQYKRMYFRPSEK
LIKAVNQPAHPKSGSHS
>Mature_97_residues
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGSFASRSYVLKSANVALGKVQYKRMYFRPSEK
LIKAVNQPAHPKSGSHS

Specific function: Unknown

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11029; Mature: 11029

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGSFASRSYVLKS
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHC
ANVALGKVQYKRMYFRPSEKLIKAVNQPAHPKSGSHS
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLRSDLIRRIARKNPTLGESVVSQILNVFFQSILQHMHDDSRVELRGFGSFASRSYVLKS
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHC
ANVALGKVQYKRMYFRPSEKLIKAVNQPAHPKSGSHS
CCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA