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The map label for this gene is 88607093

Identifier: 88607093

GI number: 88607093

Start: 653302

End: 653907

Strand: Reverse

Name: 88607093

Synonym: APH_0627

Alternate gene names: NA

Gene position: 653907-653302 (Counterclockwise)

Preceding gene: 88606766

Following gene: 88606758

Centisome position: 44.44

GC content: 37.79

Gene sequence:

>606_bases
ATGCAAAAGCCTTTACATAAGTTACTGACATGGGCTTCAAACATGGCACTATACCCATTTGGACGCCCGAAAAAAGTGCA
AAATGGTGAATTACACTATATATCTGGTACGCGCAGATGCATAGCTGCATTAATAGATCTGCTACTTGTCGTACTAGTAT
TACAGCTTATGCATGGTTGTTTCATGTATGTTTTCCCTAAAAATGAGGAGACTTTCAAGGCCGTTGAGAAATACAAAATG
GGAGCTTCACTAAAGGAGAATGAAGTAATTTTAAAAAATAGATACCTGTACAAAGTTGTGGCACTGCAGACTATACAACT
TGTTGCGCTATATATGTATTATGTATATATGTGGACGCGTTTTTCCGCTACAGTAGGTGCATATCTATTAGGACTTAAAG
TAATAGATGAAAATTCACTTGCAGCCATGAACTTCACACAAGCTACCAAAAGGTTTGCGTATGTAGGGATTTCTGGCTTA
CCTCTTTGTCTTGGAATAATTTGGTCCAATTTTGACTCAAGAAAAAGGGCATGGCACGACATGCTGGCGAATACTGTAGT
AGTAACAAGAAAGAGTTTACTTCAGTATAAAGAAAAGGCTAGCTAA

Upstream 100 bases:

>100_bases
TAGATCTTCAATATTTAGCTGAAAAACCACAAAATTCTCTCTAGATAGGTATCAGTTAGTATAAAATGCGACATTAAGCG
CTTTGTCTAGGAGAATACAT

Downstream 100 bases:

>100_bases
TGCTTTCCATAGTCCATCTAGCTCTGGGAGCAAATCCTAGTGAAGCAACTGCGTTACCCTTACGGAAGTTCTCCACCCCT
GCCCAAGCCACCATTATGCC

Product: RDD family protein

Products: NA

Alternate protein names: Membrane RDD Family Protein; Branched-Chain Amino Acid Aminotransferase I; RDD Domain-Containing Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQKPLHKLLTWASNMALYPFGRPKKVQNGELHYISGTRRCIAALIDLLLVVLVLQLMHGCFMYVFPKNEETFKAVEKYKM
GASLKENEVILKNRYLYKVVALQTIQLVALYMYYVYMWTRFSATVGAYLLGLKVIDENSLAAMNFTQATKRFAYVGISGL
PLCLGIIWSNFDSRKRAWHDMLANTVVVTRKSLLQYKEKAS

Sequences:

>Translated_201_residues
MQKPLHKLLTWASNMALYPFGRPKKVQNGELHYISGTRRCIAALIDLLLVVLVLQLMHGCFMYVFPKNEETFKAVEKYKM
GASLKENEVILKNRYLYKVVALQTIQLVALYMYYVYMWTRFSATVGAYLLGLKVIDENSLAAMNFTQATKRFAYVGISGL
PLCLGIIWSNFDSRKRAWHDMLANTVVVTRKSLLQYKEKAS
>Mature_201_residues
MQKPLHKLLTWASNMALYPFGRPKKVQNGELHYISGTRRCIAALIDLLLVVLVLQLMHGCFMYVFPKNEETFKAVEKYKM
GASLKENEVILKNRYLYKVVALQTIQLVALYMYYVYMWTRFSATVGAYLLGLKVIDENSLAAMNFTQATKRFAYVGISGL
PLCLGIIWSNFDSRKRAWHDMLANTVVVTRKSLLQYKEKAS

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23121; Mature: 23121

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPLHKLLTWASNMALYPFGRPKKVQNGELHYISGTRRCIAALIDLLLVVLVLQLMHGC
CCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FMYVFPKNEETFKAVEKYKMGASLKENEVILKNRYLYKVVALQTIQLVALYMYYVYMWTR
EEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSATVGAYLLGLKVIDENSLAAMNFTQATKRFAYVGISGLPLCLGIIWSNFDSRKRAWHD
HHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
MLANTVVVTRKSLLQYKEKAS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKPLHKLLTWASNMALYPFGRPKKVQNGELHYISGTRRCIAALIDLLLVVLVLQLMHGC
CCCHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
FMYVFPKNEETFKAVEKYKMGASLKENEVILKNRYLYKVVALQTIQLVALYMYYVYMWTR
EEEEECCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSATVGAYLLGLKVIDENSLAAMNFTQATKRFAYVGISGLPLCLGIIWSNFDSRKRAWHD
HHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
MLANTVVVTRKSLLQYKEKAS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA