Definition | Anaplasma phagocytophilum HZ, complete genome. |
---|---|
Accession | NC_007797 |
Length | 1,471,282 |
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The map label for this gene is leuS [H]
Identifier: 88607061
GI number: 88607061
Start: 549909
End: 552422
Strand: Reverse
Name: leuS [H]
Synonym: APH_0534
Alternate gene names: 88607061
Gene position: 552422-549909 (Counterclockwise)
Preceding gene: 88606925
Following gene: 88607842
Centisome position: 37.55
GC content: 43.6
Gene sequence:
>2514_bases GTGGAATATACAAAACACCGGGGCCCATTGTACATGAGTTATGATTTTAAAAATATAGAGAGTGAGATACAACAGCGGTG CTGCTTTACTATTGACAAAAGCGAAAATATAAACTGCTATGTCCTTAGTATGTTCCCATATCCTTCGGGAAATATACATA TGGGACACATACGTAATTACGTCATAGGGGACGTAATAGCTCGGTTTAAGCGTGCAAAGGGGTTTTCTGTTCTGCACCCC ATAGGATGGGACTCTTTTGGTCTTCCGGCTGAAAATGCCGCTCTGTCCTATGGTATTAACCCTGAATTGTGGACGAGGAA TAATATAGATTCCATGCGAACACAGCTCAAAGCGATAGGTATCTCATATAACTGGGATCGGGAAATTACTACCTGCTCGG AAGACTACTATAAGCATGAACAAAGTTTCTTCATCGACTTTTTACAGAATGGATTAGCCTACCGCAAGGAATCATGGGTT AATTGGGATCCGGTAGATAATACAGTTTTAGCTAACGAGCAGGTAATTGATGGCAGAGGTTGGCGCTCCGGTGCGCTGGT AGAGCGTCGCAAGTTATCCCAGTGGTTTTTGAGGATTACTGATTACGCTCAAAGCCTTCTGGATGGGTTGAATCATCTCC CAGGGTGGCCTGAAAAGGTTAAGCTTATGCAGCAGCGCTGGATTGGGAGAAGCGAAGGCGTTGTAATAGAATTTGATACG GACTGTGAGCAAAAGTTAGAAGTGTTCTCCACCATGCCTCATATGCTTTTTGGAGCGACGTTCTGCGCTGTTTCCATTGA TCATCCTATATTGCAATATGCTAAAGCAGCAGGATTTGCTGAACGTATTAATGAGCTCACGAAACCTGCTCTGCAGTGCA AAGATGCGGAAAAGGCGGGTATAGACACAGGACTGGTAGCAAAGCACCCGTTTTTAGACAAGAAATTGCCTATTTACGTC GCGAATTATGTTCTTGAAGACTCTGGCACAGGTGCGGTGTTTGGATGCCCTGCTCATGATCAAAGGGATTTTGAATTTGC CAAGCTTTATGGATTACCAATACAGCAAGTGGTGTTTCCTGAAGATGGTTCGGTATGTAACTTAGAGGAAAGAGCATACA CTGGGGATGGGGTATACTGTAATTCCGGCTTTCTTGATGGAGTACGTCTTGGCGATGCTAAACGTGTAATGCTGGAAAAG CTGGAGTCACTTGCCAATTGTAAGCAAGTAACCAACTATAGGCTGCATGACTGGGGAATATCACGGCAGAGATATTGGGG GTGCCCTATTCCGATAATATATTGCACGCAGTGCGGAATAGTACCCGTGGATAAGAAGGATTTACCCGTGCGGTTACCAA AAGATGTAGATTTCTCAAAAGGTGGCAATCCGCTCGCAAATCATCCAACATGGAAACACGTAAAATGCCACGTTTGTGGG GGAGATGCAGAACGCGAAACTGATACTTTTGATACCTTTTTTGAGTCTTCATGGTACTTTGCAGCATTTTGCAGCAGACA AAACGAGTTAAACCTGTCTGATAGCAACAGAATTCTGCCGGTGGATTACTATATAGGTGGCATAGAGCACGCTGTTCTAC ATTTGCTTTACTCTCGATTTTTCTGCAGAGCGCTGGGTAAATGCGGACACTTACAAATCGAGGAGCCTTTCCGGAATCTT ATTACGCAGGGTATGGTTTGTCACACCACATATCAAGACGGGTCTGGGAATTATCTTTTTCCCAAGGATGCCGAAAAAAT GGCTGCTGAAGGTAAAAAAGTCCTTCAAGGCAAAGTTGAGAAAATGAGTAAATCTAAAAAAAATGTGGTTGATCCCAGCG AGATACTCAAGCAGTACGGAGCAGATACTGTAAGATTGTTCATGTTATCAGATACTCCTCCAGAGCGGGATATCGAATGG ACTGATTGTGGTGTCGAAGGTGCATGGCGGTATTTGGAGCGCTTGTGGAAGGTTTTAGGAAGTAATACTAGTATTAGCAC TGAGTTTAACAATGAGAACGTAAGTGGCAAAGATCTTGAGTTCCTGTCTAAAGTACACAAACTTCTCAATGGCATTGAGG GTGATATAGAGCACTGTAGGCTAAATTGTGCCGTAGCAAAATTCAGAGAGATGAGCAACATAGTTTTTGAAATGATGAAG TGTTCAGCTAGCAATTCCGTCATTAATGAATCTGTGTGCATTTTACTGAGAGTTATGGAACCATTTATTCCTCATTTGAC TGCGAAGTTATGGGAGATTATCGGCGGAAGAGGCATGCTTTGTGAGCAGCCTTGGCCCAGTGTAAGAAAAGCCCTACTCG AAGAAAACTTTGCTACCATTGCCGTTCAAGTAGATGGCAAATTTTGCGGTACTCTTAGGGTAGAGTTGCAATGTGACGAT GACAAGGTCAAGACCGAAGCCTTAGAACTTGCGCAACGCAGAATAAAAGAGCGTTTGGTAAAGAACGTGCACTATGTGCC TGGAAAGGTAGTGAACATTGTTACAAAGGCCTAA
Upstream 100 bases:
>100_bases AACAATACTACGCTTTGCTCATGTATTGCTCTTCTAGATTATATGGTATAGTTAGCAAATGGTGACGCGCACTCTGTATG CAAAATCACCAAGCATTTTA
Downstream 100 bases:
>100_bases GATTGATTATGTGTAACGATAATGCGCTATGGAGGTGCAATATGAGAAGGACTATGTTTTGTGGCAGCCTTGGCCCCGTG TAAGAAAGGCCCTACTCGAA
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 837; Mature: 837
Protein sequence:
>837_residues MEYTKHRGPLYMSYDFKNIESEIQQRCCFTIDKSENINCYVLSMFPYPSGNIHMGHIRNYVIGDVIARFKRAKGFSVLHP IGWDSFGLPAENAALSYGINPELWTRNNIDSMRTQLKAIGISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESWV NWDPVDNTVLANEQVIDGRGWRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPGWPEKVKLMQQRWIGRSEGVVIEFDT DCEQKLEVFSTMPHMLFGATFCAVSIDHPILQYAKAAGFAERINELTKPALQCKDAEKAGIDTGLVAKHPFLDKKLPIYV ANYVLEDSGTGAVFGCPAHDQRDFEFAKLYGLPIQQVVFPEDGSVCNLEERAYTGDGVYCNSGFLDGVRLGDAKRVMLEK LESLANCKQVTNYRLHDWGISRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLANHPTWKHVKCHVCG GDAERETDTFDTFFESSWYFAAFCSRQNELNLSDSNRILPVDYYIGGIEHAVLHLLYSRFFCRALGKCGHLQIEEPFRNL ITQGMVCHTTYQDGSGNYLFPKDAEKMAAEGKKVLQGKVEKMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPPERDIEW TDCGVEGAWRYLERLWKVLGSNTSISTEFNNENVSGKDLEFLSKVHKLLNGIEGDIEHCRLNCAVAKFREMSNIVFEMMK CSASNSVINESVCILLRVMEPFIPHLTAKLWEIIGGRGMLCEQPWPSVRKALLEENFATIAVQVDGKFCGTLRVELQCDD DKVKTEALELAQRRIKERLVKNVHYVPGKVVNIVTKA
Sequences:
>Translated_837_residues MEYTKHRGPLYMSYDFKNIESEIQQRCCFTIDKSENINCYVLSMFPYPSGNIHMGHIRNYVIGDVIARFKRAKGFSVLHP IGWDSFGLPAENAALSYGINPELWTRNNIDSMRTQLKAIGISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESWV NWDPVDNTVLANEQVIDGRGWRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPGWPEKVKLMQQRWIGRSEGVVIEFDT DCEQKLEVFSTMPHMLFGATFCAVSIDHPILQYAKAAGFAERINELTKPALQCKDAEKAGIDTGLVAKHPFLDKKLPIYV ANYVLEDSGTGAVFGCPAHDQRDFEFAKLYGLPIQQVVFPEDGSVCNLEERAYTGDGVYCNSGFLDGVRLGDAKRVMLEK LESLANCKQVTNYRLHDWGISRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLANHPTWKHVKCHVCG GDAERETDTFDTFFESSWYFAAFCSRQNELNLSDSNRILPVDYYIGGIEHAVLHLLYSRFFCRALGKCGHLQIEEPFRNL ITQGMVCHTTYQDGSGNYLFPKDAEKMAAEGKKVLQGKVEKMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPPERDIEW TDCGVEGAWRYLERLWKVLGSNTSISTEFNNENVSGKDLEFLSKVHKLLNGIEGDIEHCRLNCAVAKFREMSNIVFEMMK CSASNSVINESVCILLRVMEPFIPHLTAKLWEIIGGRGMLCEQPWPSVRKALLEENFATIAVQVDGKFCGTLRVELQCDD DKVKTEALELAQRRIKERLVKNVHYVPGKVVNIVTKA >Mature_837_residues MEYTKHRGPLYMSYDFKNIESEIQQRCCFTIDKSENINCYVLSMFPYPSGNIHMGHIRNYVIGDVIARFKRAKGFSVLHP IGWDSFGLPAENAALSYGINPELWTRNNIDSMRTQLKAIGISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESWV NWDPVDNTVLANEQVIDGRGWRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPGWPEKVKLMQQRWIGRSEGVVIEFDT DCEQKLEVFSTMPHMLFGATFCAVSIDHPILQYAKAAGFAERINELTKPALQCKDAEKAGIDTGLVAKHPFLDKKLPIYV ANYVLEDSGTGAVFGCPAHDQRDFEFAKLYGLPIQQVVFPEDGSVCNLEERAYTGDGVYCNSGFLDGVRLGDAKRVMLEK LESLANCKQVTNYRLHDWGISRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLANHPTWKHVKCHVCG GDAERETDTFDTFFESSWYFAAFCSRQNELNLSDSNRILPVDYYIGGIEHAVLHLLYSRFFCRALGKCGHLQIEEPFRNL ITQGMVCHTTYQDGSGNYLFPKDAEKMAAEGKKVLQGKVEKMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPPERDIEW TDCGVEGAWRYLERLWKVLGSNTSISTEFNNENVSGKDLEFLSKVHKLLNGIEGDIEHCRLNCAVAKFREMSNIVFEMMK CSASNSVINESVCILLRVMEPFIPHLTAKLWEIIGGRGMLCEQPWPSVRKALLEENFATIAVQVDGKFCGTLRVELQCDD DKVKTEALELAQRRIKERLVKNVHYVPGKVVNIVTKA
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=854, Percent_Identity=36.6510538641686, Blast_Score=506, Evalue=1e-143, Organism=Escherichia coli, GI1786861, Length=856, Percent_Identity=40.4205607476636, Blast_Score=652, Evalue=0.0, Organism=Caenorhabditis elegans, GI71997517, Length=202, Percent_Identity=49.009900990099, Blast_Score=212, Evalue=6e-55, Organism=Caenorhabditis elegans, GI71997510, Length=202, Percent_Identity=49.009900990099, Blast_Score=212, Evalue=8e-55, Organism=Caenorhabditis elegans, GI212645227, Length=309, Percent_Identity=28.4789644012945, Blast_Score=133, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323414, Length=834, Percent_Identity=38.1294964028777, Blast_Score=548, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6321531, Length=398, Percent_Identity=24.6231155778894, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21355409, Length=817, Percent_Identity=34.7613219094247, Blast_Score=430, Evalue=1e-120,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 95264; Mature: 95264
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYTKHRGPLYMSYDFKNIESEIQQRCCFTIDKSENINCYVLSMFPYPSGNIHMGHIRNY CCCCCCCCCEEEEECHHHHHHHHHHHHCEEECCCCCCCEEEEEECCCCCCCEEHHHHHHH VIGDVIARFKRAKGFSVLHPIGWDSFGLPAENAALSYGINPELWTRNNIDSMRTQLKAIG HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC ISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESWVNWDPVDNTVLANEQVIDGRG CEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEECCCEEECCCC WRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPGWPEKVKLMQQRWIGRSEGVVIEFDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECC DCEQKLEVFSTMPHMLFGATFCAVSIDHPILQYAKAAGFAERINELTKPALQCKDAEKAG CHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCC IDTGLVAKHPFLDKKLPIYVANYVLEDSGTGAVFGCPAHDQRDFEFAKLYGLPIQQVVFP CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHCCCHHHEEEC EDGSVCNLEERAYTGDGVYCNSGFLDGVRLGDAKRVMLEKLESLANCKQVTNYRLHDWGI CCCCEECCHHHCCCCCCEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCEEECCCC SRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLANHPTWKHVKCHVCG CCCCCCCCCCCEEEECCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC GDAERETDTFDTFFESSWYFAAFCSRQNELNLSDSNRILPVDYYIGGIEHAVLHLLYSRF CCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHH FCRALGKCGHLQIEEPFRNLITQGMVCHTTYQDGSGNYLFPKDAEKMAAEGKKVLQGKVE HHHHHCCCCCEEEHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHH KMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPPERDIEWTDCGVEGAWRYLERLWKVLG HHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC SNTSISTEFNNENVSGKDLEFLSKVHKLLNGIEGDIEHCRLNCAVAKFREMSNIVFEMMK CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CSASNSVINESVCILLRVMEPFIPHLTAKLWEIIGGRGMLCEQPWPSVRKALLEENFATI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEE AVQVDGKFCGTLRVELQCDDDKVKTEALELAQRRIKERLVKNVHYVPGKVVNIVTKA EEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MEYTKHRGPLYMSYDFKNIESEIQQRCCFTIDKSENINCYVLSMFPYPSGNIHMGHIRNY CCCCCCCCCEEEEECHHHHHHHHHHHHCEEECCCCCCCEEEEEECCCCCCCEEHHHHHHH VIGDVIARFKRAKGFSVLHPIGWDSFGLPAENAALSYGINPELWTRNNIDSMRTQLKAIG HHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC ISYNWDREITTCSEDYYKHEQSFFIDFLQNGLAYRKESWVNWDPVDNTVLANEQVIDGRG CEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEECCCEEECCCC WRSGALVERRKLSQWFLRITDYAQSLLDGLNHLPGWPEKVKLMQQRWIGRSEGVVIEFDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECC DCEQKLEVFSTMPHMLFGATFCAVSIDHPILQYAKAAGFAERINELTKPALQCKDAEKAG CHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCC IDTGLVAKHPFLDKKLPIYVANYVLEDSGTGAVFGCPAHDQRDFEFAKLYGLPIQQVVFP CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHCCCHHHEEEC EDGSVCNLEERAYTGDGVYCNSGFLDGVRLGDAKRVMLEKLESLANCKQVTNYRLHDWGI CCCCEECCHHHCCCCCCEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCEEECCCC SRQRYWGCPIPIIYCTQCGIVPVDKKDLPVRLPKDVDFSKGGNPLANHPTWKHVKCHVCG CCCCCCCCCCCEEEECCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC GDAERETDTFDTFFESSWYFAAFCSRQNELNLSDSNRILPVDYYIGGIEHAVLHLLYSRF CCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHH FCRALGKCGHLQIEEPFRNLITQGMVCHTTYQDGSGNYLFPKDAEKMAAEGKKVLQGKVE HHHHHCCCCCEEEHHHHHHHHHCCEEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHH KMSKSKKNVVDPSEILKQYGADTVRLFMLSDTPPERDIEWTDCGVEGAWRYLERLWKVLG HHHHHHCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC SNTSISTEFNNENVSGKDLEFLSKVHKLLNGIEGDIEHCRLNCAVAKFREMSNIVFEMMK CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CSASNSVINESVCILLRVMEPFIPHLTAKLWEIIGGRGMLCEQPWPSVRKALLEENFATI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEE AVQVDGKFCGTLRVELQCDDDKVKTEALELAQRRIKERLVKNVHYVPGKVVNIVTKA EEEECCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA