| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is comEC [H]
Identifier: 88606770
GI number: 88606770
Start: 291284
End: 293401
Strand: Direct
Name: comEC [H]
Synonym: APH_0306
Alternate gene names: 88606770
Gene position: 291284-293401 (Clockwise)
Preceding gene: 88607372
Following gene: 88607763
Centisome position: 19.8
GC content: 40.04
Gene sequence:
>2118_bases GTGCACAAATGTAGCTTTTTCGTAAGAAGGTTTATCCACCTTATAGGGAGTGAGCTACGCTTACAAGCAGATCACCTAAT ACAATGGGTTCCTGTATTCCAAGCAATGGGGATAATACTGTATTTTTCTCTGGAATATGAGCCTACTGCGTTTTGGGTAA TAACTCTTCTCATATCTGGGATAGTTCTTGTATTTATTATAGATCTCAGTGATAAGTTGATCCCATTATCTATTATAGTA CTTGGTATTGTGGGTTTTGTATGTGCATATGCCAGAACTTCAGTACTTGATCTCAAACACTTTGTCGTAACGGACAAGAC GTATGTTAAAGACAAGGTGGGAACGCTACGAGAGATTAATTACAGACCCAAACATGTACAGTTGCTGGTTTGTGATGTTG AAGTAAGTAAACGCAAGAAAACCTGCATAAGGTTAGCGGTGAGGACCGTTATCGATCCTATAATCCAAGTAGGAGATATA ATAAAATTCACGGGAGTAATATACCCTCCCAAAGCTCCTAATTCGCATAATGGCTATGATTTTGCTAGGGATGCATATTT TAAGGGCATAGGAGCTACAGGTTTTACGACTTCTGCGGTGGTACTACAGGAGAAAGGAGAAAGTATCAGATTCTTAGATT GGATAGAAAGAAGTCGTATTAAGACGTATGAAAGATTTGCAGCACGTCTAAGTAGAGACACTACAGAAGTGCTTTCTGCC CTATTAATAGGTAAACGACAGGGAATAAGGGAAGAAATACTCAAGGATGTGAGGCGCTCAGGGCTAGCACACTTGCTTGC AATTTCGGGATTACATCTCTCATGTGTTGCAGGGATGGTTTTTATATTTTTTAGACATGTATTTGTGTGTTCTGAAAAGC TTACATTACTTTATAACACAAAGAAGCTATGTTCCGGTATTGCGATAGGTGTGAGTTTTTACTACTTGCTGTTGGCTGGC ATGCCAATTTCTGCATGTAGGGCATTTATAATGGTCTTACTAACCTTTTGTGGTATTATCATAGACAGGCGTCATAACAG TATGAGATCTTTGTCTGTTGCGGCATCAGTAATATTGCTTGCCACTCCGGAGGCTATTCTTTCTCCCAGTTTTCAGATGT CGTTTACTGCTGTTCTCTCTCTAGTTTCTTTTGGTAATCTATCTTGCAGTATGGTTGTAGCTAATAATATACTGCAGTAC CTAGTTGTGACAGCGACAGTTTCTCTGATTGCAAGTTTAGCTACTGCACCTTATGTAATTTATCACTTTCATGAATTTTC TATTGCCGGGGTGCTAGCAAACGTTATAGCCGTGCCTACAGCAACGTTTGTGGTGATACCGTTAGGGGTGCTATATCTCA TAACGTGTGATACCTTCTTCGCTCCGATTATTGCTTTTTTGTTGGAGTGGGCGGTAGGTTTTTTAATATACATTGCTCAT TGTACTGCGCTTACGGAACTGTTTACTTCTTTTCGTTCCATACCCAGTAGTTCTGTCTTGCTTGTAACACTTGGACTACT TACCGCGTCGCTATGTACGGGTTGCATACGCCTTTTTGGCGGCGTAATTTTCACCTTTTTGGGTACTGTATCGGCCATTA CATATAAAACCCCTGATATTATTTGTGATGATACTGCTGTTGTAGTAAAGGGAAGAGATGCAAATTTGTATTTTGTTATG CAAAATGGTAGTACGAGAGGTTTTAAGTATGCGCAATGGGCCAGAGATAACGGCCAGGGCAGAATCAAGCAACAGGGGGA GTTCTTGCAAGACAAAATGCTAGTATGCGAGGAAGGTGGATGTATATATAAGGATCACGTACTTATAACTAGTGACAGTA GTTTTCTTGTAGCACACTGTAAGAATATGAATCTAATTATATGCAATGAACAAACTACTTATCCAGAAGAGTGTAGCGAT ATAAAGCACATAGGGCTACAGGATATACGTGATCACGGAGTTCACTACATATGGATGAATAAATCTTCAGTTTATGTGGA AAAATCAATAACACGACGGCCCTGGCACAAAAATGCAAAGGGTTTAACCTATGAAGGCAGGGGTCAGGTAGACACTGTTG TGAAAGTGCGTTATCACCCGCAATCGAATAAAAAGTGA
Upstream 100 bases:
>100_bases TAGAAGTTTTCTAAAAAGGGTGTATCTTTTTGTGATTTTTAGTATCTTTCTTAAATAATTAATCTTTTAATTAAGGAAAG ATCGAACATGATACTTTGTT
Downstream 100 bases:
>100_bases TTTTTTGGATGATGTTGTTGACAAGAGCAAATACTTAGGAAGATAGATTGCTCATTGCTCATTGCTCATTGCTCATTGCT CATTGCTCATTGCTCATTGC
Product: ComEC/Rec2-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MHKCSFFVRRFIHLIGSELRLQADHLIQWVPVFQAMGIILYFSLEYEPTAFWVITLLISGIVLVFIIDLSDKLIPLSIIV LGIVGFVCAYARTSVLDLKHFVVTDKTYVKDKVGTLREINYRPKHVQLLVCDVEVSKRKKTCIRLAVRTVIDPIIQVGDI IKFTGVIYPPKAPNSHNGYDFARDAYFKGIGATGFTTSAVVLQEKGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSA LLIGKRQGIREEILKDVRRSGLAHLLAISGLHLSCVAGMVFIFFRHVFVCSEKLTLLYNTKKLCSGIAIGVSFYYLLLAG MPISACRAFIMVLLTFCGIIIDRRHNSMRSLSVAASVILLATPEAILSPSFQMSFTAVLSLVSFGNLSCSMVVANNILQY LVVTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAH CTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGGVIFTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVM QNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEGGCIYKDHVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSD IKHIGLQDIRDHGVHYIWMNKSSVYVEKSITRRPWHKNAKGLTYEGRGQVDTVVKVRYHPQSNKK
Sequences:
>Translated_705_residues MHKCSFFVRRFIHLIGSELRLQADHLIQWVPVFQAMGIILYFSLEYEPTAFWVITLLISGIVLVFIIDLSDKLIPLSIIV LGIVGFVCAYARTSVLDLKHFVVTDKTYVKDKVGTLREINYRPKHVQLLVCDVEVSKRKKTCIRLAVRTVIDPIIQVGDI IKFTGVIYPPKAPNSHNGYDFARDAYFKGIGATGFTTSAVVLQEKGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSA LLIGKRQGIREEILKDVRRSGLAHLLAISGLHLSCVAGMVFIFFRHVFVCSEKLTLLYNTKKLCSGIAIGVSFYYLLLAG MPISACRAFIMVLLTFCGIIIDRRHNSMRSLSVAASVILLATPEAILSPSFQMSFTAVLSLVSFGNLSCSMVVANNILQY LVVTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAH CTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGGVIFTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVM QNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEGGCIYKDHVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSD IKHIGLQDIRDHGVHYIWMNKSSVYVEKSITRRPWHKNAKGLTYEGRGQVDTVVKVRYHPQSNKK >Mature_705_residues MHKCSFFVRRFIHLIGSELRLQADHLIQWVPVFQAMGIILYFSLEYEPTAFWVITLLISGIVLVFIIDLSDKLIPLSIIV LGIVGFVCAYARTSVLDLKHFVVTDKTYVKDKVGTLREINYRPKHVQLLVCDVEVSKRKKTCIRLAVRTVIDPIIQVGDI IKFTGVIYPPKAPNSHNGYDFARDAYFKGIGATGFTTSAVVLQEKGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSA LLIGKRQGIREEILKDVRRSGLAHLLAISGLHLSCVAGMVFIFFRHVFVCSEKLTLLYNTKKLCSGIAIGVSFYYLLLAG MPISACRAFIMVLLTFCGIIIDRRHNSMRSLSVAASVILLATPEAILSPSFQMSFTAVLSLVSFGNLSCSMVVANNILQY LVVTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAH CTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGGVIFTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVM QNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEGGCIYKDHVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSD IKHIGLQDIRDHGVHYIWMNKSSVYVEKSITRRPWHKNAKGLTYEGRGQVDTVVKVRYHPQSNKK
Specific function: The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding [H]
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI [H]
Homologues:
Organism=Escherichia coli, GI87081801, Length=267, Percent_Identity=28.0898876404494, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 78706; Mature: 78706
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKCSFFVRRFIHLIGSELRLQADHLIQWVPVFQAMGIILYFSLEYEPTAFWVITLLISG CCHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHH IVLVFIIDLSDKLIPLSIIVLGIVGFVCAYARTSVLDLKHFVVTDKTYVKDKVGTLREIN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCHHHHCC YRPKHVQLLVCDVEVSKRKKTCIRLAVRTVIDPIIQVGDIIKFTGVIYPPKAPNSHNGYD CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCCCCCC FARDAYFKGIGATGFTTSAVVLQEKGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSA HHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLIGKRQGIREEILKDVRRSGLAHLLAISGLHLSCVAGMVFIFFRHVFVCSEKLTLLYNT HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECC KKLCSGIAIGVSFYYLLLAGMPISACRAFIMVLLTFCGIIIDRRHNSMRSLSVAASVILL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEE ATPEAILSPSFQMSFTAVLSLVSFGNLSCSMVVANNILQYLVVTATVSLIASLATAPYVI ECCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAH EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGGVIFTFLGTVSAITYKTPDI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE ICDDTAVVVKGRDANLYFVMQNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEGG EECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHEECCCC CIYKDHVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSDIKHIGLQDIRDHGVHYIWMN EEEECCEEEECCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCEEEEEEC KSSVYVEKSITRRPWHKNAKGLTYEGRGQVDTVVKVRYHPQSNKK CCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MHKCSFFVRRFIHLIGSELRLQADHLIQWVPVFQAMGIILYFSLEYEPTAFWVITLLISG CCHHHHHHHHHHHHHCHHHEECHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHH IVLVFIIDLSDKLIPLSIIVLGIVGFVCAYARTSVLDLKHFVVTDKTYVKDKVGTLREIN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCHHHHCC YRPKHVQLLVCDVEVSKRKKTCIRLAVRTVIDPIIQVGDIIKFTGVIYPPKAPNSHNGYD CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCCCCCCC FARDAYFKGIGATGFTTSAVVLQEKGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSA HHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLIGKRQGIREEILKDVRRSGLAHLLAISGLHLSCVAGMVFIFFRHVFVCSEKLTLLYNT HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEECC KKLCSGIAIGVSFYYLLLAGMPISACRAFIMVLLTFCGIIIDRRHNSMRSLSVAASVILL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEE ATPEAILSPSFQMSFTAVLSLVSFGNLSCSMVVANNILQYLVVTATVSLIASLATAPYVI ECCHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE YHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAH EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGGVIFTFLGTVSAITYKTPDI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCE ICDDTAVVVKGRDANLYFVMQNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEGG EECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHEECCCC CIYKDHVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSDIKHIGLQDIRDHGVHYIWMN EEEECCEEEECCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCHHHHHHCCEEEEEEC KSSVYVEKSITRRPWHKNAKGLTYEGRGQVDTVVKVRYHPQSNKK CCCEEEECCCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7968523; 8969508; 9384377 [H]