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The map label for this gene is p44-45 [H]

Identifier: 88606756

GI number: 88606756

Start: 172921

End: 174024

Strand: Reverse

Name: p44-45 [H]

Synonym: APH_0171

Alternate gene names: 88606756

Gene position: 174024-172921 (Counterclockwise)

Preceding gene: 88607467

Following gene: 88606928

Centisome position: 11.83

GC content: 43.75

Gene sequence:

>1104_bases
ATGAGATCTAGAAGTAAGCTATTTTTAGGAAGCGTAATGATGTCGATGGCTATAGTCATGGCTGGGAATGATGTCAGGGC
TCATGATGACGTTAGCGCTTTGGAGACTGGTGGTGCGGGATATTTCTATGTTGGTTTGGATTACAGTCCAGCGTTTAGCA
AGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACTAAGGCAGTATATCCATACTTAAAGGATGGAAAGAGTGTA
AAGCTAGAGTCACACAAGTTTGACTGGAACACTCCTGATCCTCGGATTGGGTTTAAGGACAACATGCTTGTAGCTATGGA
AGGCAGTGTTGGTTATGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTGGTTACGAGCGCTTCAAGACCAAGGGTATTA
GAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAGTATATCTACTAGCTAAGGAGTTAGCTTATGATGTTGTTACTGGT
CAGACTGATAAGCTTACTGCTGCTCTTGCTAAAACCTCCGGTAAGGATATTGTTCAGTTTGCTAAGGCGGTGGAGATTTC
TCATTCCGAGATTGATAAGAAGGTTTGTAATGGGGGCCACTCTGCTATAAAGGCAGGGTCTAATACCGCTGGAAAGAAAT
ATGCTGCTGAACCCGTCGACGGTACTAACAAGGAAACAGCACAGTGTAGCGGATTAGGTGAAAGTGGAGAGGAAAAATCG
CATAAGTTTCTGAGTAAGTTTGTAGACCTTACTAAAATAGGGGAAGGTAAAAACTGGCCTACTGGCCGAGCGGCGCAAAA
TGACAGCAGTAGTGGGTCTGTTAAAATAGTAGAGGGGCCTACTAATAGCAACGCCAAAGCCGTAGCCACAGACCTAACAA
AGCTCACTGCTGAAGAAAAAACCATAGTAGCAGGGTTACTGGCTAAAACTATTGAAGGTGGGGAAGTTGTTGAGATTAGG
GCGGTTTCTTCTACTTCTGTAATGGTCAATGCTTGTTATGATCTTCTTAGTGAAGGTTTAGGTGTTGTTCCTTATGCTTG
TGTTGGTTTAGGGGGTAACTTCGTGGGTGTTGTTGATGGCTCACGTCGCACAATACGTTTTTGA

Upstream 100 bases:

>100_bases
TTATGTCGGTGGGGAATTTGGTGTTAGGTTCGCTTTTTAAGGTGGTTTGTTGGAAGCGGGGTAAGTCAAACTTACCCCGC
TTCTATTAGGGAGTTAGTAT

Downstream 100 bases:

>100_bases
TCCTAAATACCCGAGGCAAGTGACTAGACAAAATTAGTGCCGTATCACTCACGAAACAAACTACGATCAGCGATTCTCCA
TACTTAGCAGGTCCGTACAG

Product: P44-45 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDIVQFAKAVEISHSEIDKKVCNGGHSAIKAGSNTAGKKYAAEPVDGTNKETAQCSGLGESGEEKS
HKFLSKFVDLTKIGEGKNWPTGRAAQNDSSSGSVKIVEGPTNSNAKAVATDLTKLTAEEKTIVAGLLAKTIEGGEVVEIR
AVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGSRRTIRF

Sequences:

>Translated_367_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDIVQFAKAVEISHSEIDKKVCNGGHSAIKAGSNTAGKKYAAEPVDGTNKETAQCSGLGESGEEKS
HKFLSKFVDLTKIGEGKNWPTGRAAQNDSSSGSVKIVEGPTNSNAKAVATDLTKLTAEEKTIVAGLLAKTIEGGEVVEIR
AVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGSRRTIRF
>Mature_367_residues
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAVYPYLKDGKSV
KLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTG
QTDKLTAALAKTSGKDIVQFAKAVEISHSEIDKKVCNGGHSAIKAGSNTAGKKYAAEPVDGTNKETAQCSGLGESGEEKS
HKFLSKFVDLTKIGEGKNWPTGRAAQNDSSSGSVKIVEGPTNSNAKAVATDLTKLTAEEKTIVAGLLAKTIEGGEVVEIR
AVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGSRRTIRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 39034; Mature: 39034

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSI
CCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDIVQF
EEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AKAVEISHSEIDKKVCNGGHSAIKAGSNTAGKKYAAEPVDGTNKETAQCSGLGESGEEKS
HHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCHHH
HKFLSKFVDLTKIGEGKNWPTGRAAQNDSSSGSVKIVEGPTNSNAKAVATDLTKLTAEEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
TIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEEEC
SRRTIRF
CCEEECC
>Mature Secondary Structure
MRSRSKLFLGSVMMSMAIVMAGNDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSI
CCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHCCCCEEEEEEECCCHHHHHHHCCEE
RESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVE
ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
LEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAALAKTSGKDIVQF
EEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AKAVEISHSEIDKKVCNGGHSAIKAGSNTAGKKYAAEPVDGTNKETAQCSGLGESGEEKS
HHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCHHH
HKFLSKFVDLTKIGEGKNWPTGRAAQNDSSSGSVKIVEGPTNSNAKAVATDLTKLTAEEK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
TIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEEEC
SRRTIRF
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]