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The map label for this gene is cspG [C]

Identifier: 88606701

GI number: 88606701

Start: 139122

End: 139391

Strand: Direct

Name: cspG [C]

Synonym: APH_0135

Alternate gene names: 88606701

Gene position: 139122-139391 (Clockwise)

Preceding gene: 88607639

Following gene: 88607475

Centisome position: 9.46

GC content: 45.56

Gene sequence:

>270_bases
ATGTCTCAGTTAGTGGATGGGAAGGCGTTCTACACCGGTCATGTTAAGTGGTTTAGCGTAGAGAAGGGTTATGGTTTTAT
TTGTAAGGACAGCTCCGAAGGCAGTAAGGGTTCTGCTATGGGGCATGGTGAGAAGGATGTCTTCGTACATATTACATCGC
TGCAGAGGAGCAGAATAGATAACCTCAGAGAAGGACAGAAGGTTAGGTACCAGTTGGATGAAAATAACGGAAAGGTTTCT
GCTGTGAACCTAGAGGTGCTTTCGGAGTAA

Upstream 100 bases:

>100_bases
ATTAAAATATAGGCTCAAAGCGCCGTGTATCTTACAACTCAGGCGATAGCTTGGGTACTCGAGAGTAGCGGTTTGTTGTC
TGAATATTTAGGGTTTTTTG

Downstream 100 bases:

>100_bases
CACTATGTTTGGGCCTTGTCAGGATGTATGGTATGGCTAGGCGCTAGAAAGAGGCGTCGTCTATGGGGTATTCTGGTTGA
CTTATTATCGTCCGGATTTT

Product: CSD family cold shock protein

Products: NA

Alternate protein names: Cold Shock Protein; Cold Shock-Like Protein CspA; Cold Shock Family Protein

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSQLVDGKAFYTGHVKWFSVEKGYGFICKDSSEGSKGSAMGHGEKDVFVHITSLQRSRIDNLREGQKVRYQLDENNGKVS
AVNLEVLSE

Sequences:

>Translated_89_residues
MSQLVDGKAFYTGHVKWFSVEKGYGFICKDSSEGSKGSAMGHGEKDVFVHITSLQRSRIDNLREGQKVRYQLDENNGKVS
AVNLEVLSE
>Mature_88_residues
SQLVDGKAFYTGHVKWFSVEKGYGFICKDSSEGSKGSAMGHGEKDVFVHITSLQRSRIDNLREGQKVRYQLDENNGKVSA
VNLEVLSE

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9925; Mature: 9794

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLVDGKAFYTGHVKWFSVEKGYGFICKDSSEGSKGSAMGHGEKDVFVHITSLQRSRID
CCCCCCCCEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHC
NLREGQKVRYQLDENNGKVSAVNLEVLSE
CCCCCCEEEEEEECCCCEEEEEEEEEECC
>Mature Secondary Structure 
SQLVDGKAFYTGHVKWFSVEKGYGFICKDSSEGSKGSAMGHGEKDVFVHITSLQRSRID
CCCCCCCEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHC
NLREGQKVRYQLDENNGKVSAVNLEVLSE
CCCCCCEEEEEEECCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA