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The map label for this gene is pss [H]

Identifier: 87201230

GI number: 87201230

Start: 3435376

End: 3436779

Strand: Direct

Name: pss [H]

Synonym: Saro_3218

Alternate gene names: 87201230

Gene position: 3435376-3436779 (Clockwise)

Preceding gene: 87201229

Following gene: 87201232

Centisome position: 96.46

GC content: 64.32

Gene sequence:

>1404_bases
ATGACCAGGCACATGCCCATCAGCGAGACGCAGGACGCGCCTCCGCGCCGCCGCATCACGCTACCGCTCGCCCCGCCTCT
CGAACAGCGGCGCCTGCAGCTCTACATTGCACTGCTGCTGCTTGACGGCGCGGCGATCCTCAACGGCTTCTGCATCGCAA
GCTGGCTCTATCTGGGTCGCTTCCTCGATGAGACTTCGCTGCTGCACAGCCAGGTCATGCTGCCGATCTACTGGTCGATC
GCATTGTCGCTGCAAGTCTACACCCTGACTGCACTGCGGCGTCCGAATTTCGCCCGCGCCCGCGCTGGCCTCTCGCTCAT
CGGCGCCGAAACCGTGCTGCTCTTCGTCGGCTTTGCAACCAAGAGCACCGACAATTTTTCGCGCGTGTCATCCTTGCTGG
GTCTGGGCCTGAGCCTCGTCTTGCTAATGTGGGTCCGCGCCCTTGTCCGCCCGCTGATCAAGGCGCGTTGCGGCGATGCG
GTTACGAATACCCTGCTGATCGATGACGGCGGGACGCCGCTGCGGATTCCCCACGCCTATCACATTGACGCGCGGGAACA
TCACCTGGCCCCCGATCTGTCGGACCCGCACATGATGGACCGGCTCGGGCTTTACATGATGAACATGGACCGGGTCATGG
TAAGTTGCCCCCACGATCGCCGGGCCGCGTGGGCACTCGTATTCAAGAGCGCGAATGTCTCGGGCGAGATCGTGGACCCG
GAAGTGAACATGCTTGGCGTACTGGGTGCAAGGCGCGAACGCGGCTACGGCGCGCTGATCGTGGCAAGCGGCCCGCTGGG
CCTGCGCGCCCGCGCGGTCAAGCGCTTGCTCGACCTTGCGCTCGCAGGTGGCGCGGTTCTGGCGCTCGGGCCAGTGCTGC
TCCTGGTGGCGGTGCTGATCAAGCTGGAGGACGGAGGCCCCGTGCTGTTCATCCAGAAGCGCACGGGGCGGGGTAACCGC
TTCTTCCCGATCTTCAAGTTCCGGTCGATGCGCGTGGAACGCCTCGATTCAACGGGCTCGCGCTCGGCAAGCAAGGACGA
TGACCGTATCACGCGGATCGGACGCTTCATACGAAGCACGAGCATCGACGAGTTGCCGCAGCTGTTCAACGTGCTGCGCG
GAGAAATGTCCATCGTCGGCCCACGCCCGCACGCCATCGGTTCGCTTGCCGGCGAGAAACTATTCTGGGAAGTGGACCAC
CGCTACTGGCTGCGTCATTCGCTGAAACCCGGCCTTACCGGCCTGGCCCAGGTGCGCGGCCTTCGCGGTGCGACCGACAC
CGAGACGGACCTTGCCAACCGTCTGCAGGCCGATCTCGAATACCTCGACGGGTGGACGATCTGGCGCGACCTCAAGATCA
TCGTCAACACTGCGCGCGTGCTCGTGCACGACCGAGCCTTCTGA

Upstream 100 bases:

>100_bases
GTGCAATAACTTTTCAGTTGGTCGCACCGCATACTGAACGGAATCGCCCGCAATACACGTTGCAGGGAACGATGAACGCG
AAAGAACGGCAGGACGCGCG

Downstream 100 bases:

>100_bases
TCCGGACCGTCCGCAAATTGATGGACACCCTATCTCGGAACCGGGCAAATCCCGGACGGCGCAGTCTGGCGCAGCCGCTC
GACCCGCTTGGCGAAGGATC

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTRHMPISETQDAPPRRRITLPLAPPLEQRRLQLYIALLLLDGAAILNGFCIASWLYLGRFLDETSLLHSQVMLPIYWSI
ALSLQVYTLTALRRPNFARARAGLSLIGAETVLLFVGFATKSTDNFSRVSSLLGLGLSLVLLMWVRALVRPLIKARCGDA
VTNTLLIDDGGTPLRIPHAYHIDAREHHLAPDLSDPHMMDRLGLYMMNMDRVMVSCPHDRRAAWALVFKSANVSGEIVDP
EVNMLGVLGARRERGYGALIVASGPLGLRARAVKRLLDLALAGGAVLALGPVLLLVAVLIKLEDGGPVLFIQKRTGRGNR
FFPIFKFRSMRVERLDSTGSRSASKDDDRITRIGRFIRSTSIDELPQLFNVLRGEMSIVGPRPHAIGSLAGEKLFWEVDH
RYWLRHSLKPGLTGLAQVRGLRGATDTETDLANRLQADLEYLDGWTIWRDLKIIVNTARVLVHDRAF

Sequences:

>Translated_467_residues
MTRHMPISETQDAPPRRRITLPLAPPLEQRRLQLYIALLLLDGAAILNGFCIASWLYLGRFLDETSLLHSQVMLPIYWSI
ALSLQVYTLTALRRPNFARARAGLSLIGAETVLLFVGFATKSTDNFSRVSSLLGLGLSLVLLMWVRALVRPLIKARCGDA
VTNTLLIDDGGTPLRIPHAYHIDAREHHLAPDLSDPHMMDRLGLYMMNMDRVMVSCPHDRRAAWALVFKSANVSGEIVDP
EVNMLGVLGARRERGYGALIVASGPLGLRARAVKRLLDLALAGGAVLALGPVLLLVAVLIKLEDGGPVLFIQKRTGRGNR
FFPIFKFRSMRVERLDSTGSRSASKDDDRITRIGRFIRSTSIDELPQLFNVLRGEMSIVGPRPHAIGSLAGEKLFWEVDH
RYWLRHSLKPGLTGLAQVRGLRGATDTETDLANRLQADLEYLDGWTIWRDLKIIVNTARVLVHDRAF
>Mature_466_residues
TRHMPISETQDAPPRRRITLPLAPPLEQRRLQLYIALLLLDGAAILNGFCIASWLYLGRFLDETSLLHSQVMLPIYWSIA
LSLQVYTLTALRRPNFARARAGLSLIGAETVLLFVGFATKSTDNFSRVSSLLGLGLSLVLLMWVRALVRPLIKARCGDAV
TNTLLIDDGGTPLRIPHAYHIDAREHHLAPDLSDPHMMDRLGLYMMNMDRVMVSCPHDRRAAWALVFKSANVSGEIVDPE
VNMLGVLGARRERGYGALIVASGPLGLRARAVKRLLDLALAGGAVLALGPVLLLVAVLIKLEDGGPVLFIQKRTGRGNRF
FPIFKFRSMRVERLDSTGSRSASKDDDRITRIGRFIRSTSIDELPQLFNVLRGEMSIVGPRPHAIGSLAGEKLFWEVDHR
YWLRHSLKPGLTGLAQVRGLRGATDTETDLANRLQADLEYLDGWTIWRDLKIIVNTARVLVHDRAF

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=220, Percent_Identity=42.2727272727273, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 52004; Mature: 51873

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRHMPISETQDAPPRRRITLPLAPPLEQRRLQLYIALLLLDGAAILNGFCIASWLYLGR
CCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLDETSLLHSQVMLPIYWSIALSLQVYTLTALRRPNFARARAGLSLIGAETVLLFVGFAT
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHCCHHHHHHHEEEHEEEECC
KSTDNFSRVSSLLGLGLSLVLLMWVRALVRPLIKARCGDAVTNTLLIDDGGTPLRIPHAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCEECCCEE
HIDAREHHLAPDLSDPHMMDRLGLYMMNMDRVMVSCPHDRRAAWALVFKSANVSGEIVDP
ECCCHHHCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCCCCEEEEEEECCCCCCEEECC
EVNMLGVLGARRERGYGALIVASGPLGLRARAVKRLLDLALAGGAVLALGPVLLLVAVLI
CCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLEDGGPVLFIQKRTGRGNRFFPIFKFRSMRVERLDSTGSRSASKDDDRITRIGRFIRST
EECCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
SIDELPQLFNVLRGEMSIVGPRPHAIGSLAGEKLFWEVDHRYWLRHSLKPGLTGLAQVRG
CHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECHHHHHHHCCCCCHHHHHHHHC
LRGATDTETDLANRLQADLEYLDGWTIWRDLKIIVNTARVLVHDRAF
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
TRHMPISETQDAPPRRRITLPLAPPLEQRRLQLYIALLLLDGAAILNGFCIASWLYLGR
CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FLDETSLLHSQVMLPIYWSIALSLQVYTLTALRRPNFARARAGLSLIGAETVLLFVGFAT
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCHHHHHCCHHHHHHHEEEHEEEECC
KSTDNFSRVSSLLGLGLSLVLLMWVRALVRPLIKARCGDAVTNTLLIDDGGTPLRIPHAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCEECCCEE
HIDAREHHLAPDLSDPHMMDRLGLYMMNMDRVMVSCPHDRRAAWALVFKSANVSGEIVDP
ECCCHHHCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCCCCEEEEEEECCCCCCEEECC
EVNMLGVLGARRERGYGALIVASGPLGLRARAVKRLLDLALAGGAVLALGPVLLLVAVLI
CCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KLEDGGPVLFIQKRTGRGNRFFPIFKFRSMRVERLDSTGSRSASKDDDRITRIGRFIRST
EECCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
SIDELPQLFNVLRGEMSIVGPRPHAIGSLAGEKLFWEVDHRYWLRHSLKPGLTGLAQVRG
CHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEEEEECHHHHHHHCCCCCHHHHHHHHC
LRGATDTETDLANRLQADLEYLDGWTIWRDLKIIVNTARVLVHDRAF
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]