Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200976
Identifier: 87200976
GI number: 87200976
Start: 3180940
End: 3181818
Strand: Direct
Name: 87200976
Synonym: Saro_2964
Alternate gene names: NA
Gene position: 3180940-3181818 (Clockwise)
Preceding gene: 87200975
Following gene: 87200983
Centisome position: 89.31
GC content: 65.98
Gene sequence:
>879_bases ATGCGTCGGCTACTTACCGTTCTCCTCCCGGCACTTCTCGCAGCAGGCACCGCACAGGCCAAACCGCTGGAATACAAGGT CATCACGACCTCGCCCGCCAGCCTCGTCGCCAACATCTCGCTGATCACCGGAGAGAAGGAGGCCGTCCTGGTCGACGTCC CCTTCACCCGGGCAGACGCGATGCGCGTCGCCGCCGAGGTGCTGGACAGCGGCAAGACGCTCAAGGCCATCGTGATCACC CACGACCACCCGGACCACTTCTTCGGGCTCGACGTGTTGCAGGACGCATTTCCCGACGCGAAGATCCTGGCGAACCCGGT GGCGGCCAGGGACATGGCGCGCTCCATCCCGATCAAGTTCAAGCGCTGGGCCGCGCAACTCGGAACCAACGCCCCGCGCC GCGGCGTGCAGCCCGATGCCATGCAGGGCGACACGATAGAGCTTGAAGGCCACAAGCTGCAGGTGATCGGACCGATGCAG GGCGACCATGTCCACTCCACGGTGCTTTGGGACGCGGAGACGCGCACCCTGATCGCCGGGGACGTTCTCTTCAACGGAGT CTATGTCTGGCTCGGCGAACATGGGCCCGCCCAGTACGAGGCATGGCTGCGGACGCTCGACCGGCTCGAGGCACTGAACC CTGCAAGGGTGATCGCGGGCCACCGTCAGGCAGGCCTGCCTGACGATAACATGAGCATCGCCTGGACACGCGCCTACATC ACCGCCTTTGCCGCCGAGGCAAAGACCGCGAAGACCTCGGCCGAACTCGCGGCAGCGATGGCGGCGCGCTATCCCACGGC CACCGAAGTCCTCGGCGGCTTCCTGCTGGGCATTTCCAGCAAGGTCGGTGCGGGCGAGATTCCGCCCTGGGACGAATAG
Upstream 100 bases:
>100_bases GCCCACCGTTCTGCACCTGTGCTCCGATGGCGCGAGCTTCATCAACGGGGCGACATTCACCATCGATGGCGGCCAGACCG CTCACTGAGGAGAAGCAACG
Downstream 100 bases:
>100_bases GCGCTCAGGCCTTGCGGATGTAGCCGCAGCAGGGACACTTTCCGGCGGACCTTGTGTCGGCAGTCCACACCTGCCCGCAA AGATCGCAGTTCGACGCGCC
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Hydrolase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRRLLTVLLPALLAAGTAQAKPLEYKVITTSPASLVANISLITGEKEAVLVDVPFTRADAMRVAAEVLDSGKTLKAIVIT HDHPDHFFGLDVLQDAFPDAKILANPVAARDMARSIPIKFKRWAAQLGTNAPRRGVQPDAMQGDTIELEGHKLQVIGPMQ GDHVHSTVLWDAETRTLIAGDVLFNGVYVWLGEHGPAQYEAWLRTLDRLEALNPARVIAGHRQAGLPDDNMSIAWTRAYI TAFAAEAKTAKTSAELAAAMAARYPTATEVLGGFLLGISSKVGAGEIPPWDE
Sequences:
>Translated_292_residues MRRLLTVLLPALLAAGTAQAKPLEYKVITTSPASLVANISLITGEKEAVLVDVPFTRADAMRVAAEVLDSGKTLKAIVIT HDHPDHFFGLDVLQDAFPDAKILANPVAARDMARSIPIKFKRWAAQLGTNAPRRGVQPDAMQGDTIELEGHKLQVIGPMQ GDHVHSTVLWDAETRTLIAGDVLFNGVYVWLGEHGPAQYEAWLRTLDRLEALNPARVIAGHRQAGLPDDNMSIAWTRAYI TAFAAEAKTAKTSAELAAAMAARYPTATEVLGGFLLGISSKVGAGEIPPWDE >Mature_292_residues MRRLLTVLLPALLAAGTAQAKPLEYKVITTSPASLVANISLITGEKEAVLVDVPFTRADAMRVAAEVLDSGKTLKAIVIT HDHPDHFFGLDVLQDAFPDAKILANPVAARDMARSIPIKFKRWAAQLGTNAPRRGVQPDAMQGDTIELEGHKLQVIGPMQ GDHVHSTVLWDAETRTLIAGDVLFNGVYVWLGEHGPAQYEAWLRTLDRLEALNPARVIAGHRQAGLPDDNMSIAWTRAYI TAFAAEAKTAKTSAELAAAMAARYPTATEVLGGFLLGISSKVGAGEIPPWDE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31439; Mature: 31439
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLTVLLPALLAAGTAQAKPLEYKVITTSPASLVANISLITGEKEAVLVDVPFTRADA CHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEECCCCHHHH MRVAAEVLDSGKTLKAIVITHDHPDHFFGLDVLQDAFPDAKILANPVAARDMARSIPIKF HHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCHHH KRWAAQLGTNAPRRGVQPDAMQGDTIELEGHKLQVIGPMQGDHVHSTVLWDAETRTLIAG HHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEH DVLFNGVYVWLGEHGPAQYEAWLRTLDRLEALNPARVIAGHRQAGLPDDNMSIAWTRAYI HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEHHHHH TAFAAEAKTAKTSAELAAAMAARYPTATEVLGGFLLGISSKVGAGEIPPWDE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRRLLTVLLPALLAAGTAQAKPLEYKVITTSPASLVANISLITGEKEAVLVDVPFTRADA CHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHEEEEEEECCCCEEEEECCCCHHHH MRVAAEVLDSGKTLKAIVITHDHPDHFFGLDVLQDAFPDAKILANPVAARDMARSIPIKF HHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCHHH KRWAAQLGTNAPRRGVQPDAMQGDTIELEGHKLQVIGPMQGDHVHSTVLWDAETRTLIAG HHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEEECCCCCEEEEH DVLFNGVYVWLGEHGPAQYEAWLRTLDRLEALNPARVIAGHRQAGLPDDNMSIAWTRAYI HHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEHHHHH TAFAAEAKTAKTSAELAAAMAARYPTATEVLGGFLLGISSKVGAGEIPPWDE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA