Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200968
Identifier: 87200968
GI number: 87200968
Start: 3174457
End: 3174918
Strand: Direct
Name: 87200968
Synonym: Saro_2956
Alternate gene names: NA
Gene position: 3174457-3174918 (Clockwise)
Preceding gene: 87200950
Following gene: 87200972
Centisome position: 89.13
GC content: 63.64
Gene sequence:
>462_bases ATGACCGCAGGACCATCCGGCGTGATCGCCCAGACCATCCAGCTCGCACTGGCCCCGGTCTTCGTGCTTGTCGCCATCGG CAACATCATGAACATCCTGACGACACGCCTGGGGCGTATCGTCGATCGTTCGCGCACCCTGCAGAAGCTGCACGCCGAAA CCACTGGCACCGACCACGACGTCGTGGTCATCGAGCTGCGCTATGTCGACCGGCGCATCCACCTGATCGGGCGAGCACTG TTGCTGCTCGTCCTGTCCGGCCTGGCCATCGGCGTGACGGTCGGATCGCTGTTCATCGGCGAGATGGCGCAACTGGAGAC CCGCAATGTCACCGGGATCACGTTCTTCGTCGCCATCGCGCTGCTGATGGTCGCGCTGGTCAATCTGCTGCTCGAGACGA GAATCGCGGCCAGTTCGCTGCGCCTGCCGCAGGAACTGCTCGAACTGGAGCGCGAGATCTAG
Upstream 100 bases:
>100_bases GCGGTCCCGGAACGCGAATCTAGCGCAGACGTATGCCGGCAGGGCAGGCTTGCCCCGCCCCTCGCATGCGTGGCACTAGG GGCCGACCCGCAGGAGGAAT
Downstream 100 bases:
>100_bases GGGCAGGACCTAACGGGACGTCAGTTCAGAAGCTTGCCGCTCTTGTCGCGGATCATGCCTTCGATCATCCGCCGCGCGAA GCCGAGGCTGGCGGGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTAGPSGVIAQTIQLALAPVFVLVAIGNIMNILTTRLGRIVDRSRTLQKLHAETTGTDHDVVVIELRYVDRRIHLIGRAL LLLVLSGLAIGVTVGSLFIGEMAQLETRNVTGITFFVAIALLMVALVNLLLETRIAASSLRLPQELLELEREI
Sequences:
>Translated_153_residues MTAGPSGVIAQTIQLALAPVFVLVAIGNIMNILTTRLGRIVDRSRTLQKLHAETTGTDHDVVVIELRYVDRRIHLIGRAL LLLVLSGLAIGVTVGSLFIGEMAQLETRNVTGITFFVAIALLMVALVNLLLETRIAASSLRLPQELLELEREI >Mature_152_residues TAGPSGVIAQTIQLALAPVFVLVAIGNIMNILTTRLGRIVDRSRTLQKLHAETTGTDHDVVVIELRYVDRRIHLIGRALL LLVLSGLAIGVTVGSLFIGEMAQLETRNVTGITFFVAIALLMVALVNLLLETRIAASSLRLPQELLELEREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16631; Mature: 16500
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGPSGVIAQTIQLALAPVFVLVAIGNIMNILTTRLGRIVDRSRTLQKLHAETTGTDHD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VVVIELRYVDRRIHLIGRALLLLVLSGLAIGVTVGSLFIGEMAQLETRNVTGITFFVAIA EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLMVALVNLLLETRIAASSLRLPQELLELEREI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TAGPSGVIAQTIQLALAPVFVLVAIGNIMNILTTRLGRIVDRSRTLQKLHAETTGTDHD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VVVIELRYVDRRIHLIGRALLLLVLSGLAIGVTVGSLFIGEMAQLETRNVTGITFFVAIA EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LLMVALVNLLLETRIAASSLRLPQELLELEREI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA