Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200452

Identifier: 87200452

GI number: 87200452

Start: 2624046

End: 2625635

Strand: Reverse

Name: 87200452

Synonym: Saro_2439

Alternate gene names: NA

Gene position: 2625635-2624046 (Counterclockwise)

Preceding gene: 87200454

Following gene: 87200451

Centisome position: 73.72

GC content: 64.65

Gene sequence:

>1590_bases
GTGAAGACCATCCACGGCCTGTTCCTTGCCGGTTGCAGCGGACTTGCGCTTGCCGGTTGCGGCCCGACCGACATCGCCTC
GCCCGGCACCGGCGGCAACGTCATCATCAACCCGTCTCCGACGCCTACGCCGACCGCGACGCCCACTCCGACGCCGACCG
TCACTGCGGCTGCCGGCTGCCCGACGATCAGCGACCCGCAGGGCCTGACCGATTCCGGCACGATCACCGGCCCGACCGGA
TCCTGGCGCGTTTGCACGCTGCCCTCGACGATCAACAAGTCGATCACCCTGCCCAAGATCGCGGGGCTGCTCTATTCGCT
CAACGGCCGCGTCAACGTCGGCAGCGATCTCGGCTTCACCAAGACTTCGGGTGAGGCGAGCGTGACGCTGACCATCGATC
CGGGCGTCATCCTGTTCGGAAATACCGGCACGTCGTGGCTCGCCGTCAATCGCGGCAACAAGATCAACGCGGTTGGCACG
GCTTCGGCGCCGATCGTCTTTACCAGCCGCGACAACGTGCTCGGCCTCAACACCGAAACCTCGCAGGGGCAGTGGGGCGG
CGTCGTGCTGATGGGCCGCGCCAAGATCACCGACTGCGACGCGACCGGCGGCGGCACCGTGACCGGCGGAACCTGCCAGC
GCAACACCGAAGGTTCGGCCGACCCGGCGCTGTTCGGCGGCCAGGACGATACCGACAGCTCGGGCTCGATGAAGTACGTG
CAGATCCGCTATTCGGGCTACGTGCTGGGTTCGGACAAGGAACTCCAGGCGCTGACCACCGAAGGCGTGGGTTCGGGCAC
GACGCTCGAATACATCCAGAGCTACAACAGCTCGGACGACGGCGCGGAATTCTTCGGCGGCGTGGTCAACATGAAGCACT
ATGTCGCGGTCGGTGCGGATGACGACAGCCTCGACATCGACACCGGCCTGCGCGGCAACTTCCAGTACCTGCTGCTGATC
CAGCGCTCGGGTGCGGGCGACGCGCTGATGGAAATCGACAGCAACGGCGCTTCGACCGAAACCGTCGGCGGTTCGACCTC
CGCCGTGTTCCGCCAGAACACCAAGATCGCGAACTTCACCGCGATCCAGTCGGCCGTGTCGAGCAACAACGAATCGAACG
ACAAGGCCTCGATCCTGATCCGTGGCAACTCGGACATCACGCTGGCCAACGGCGTGGTCTATTCTCCGAACAACGAGTGC
CTGCGCATGGACGACAACGGCATCGTGTCACCGGGCACGGCGGCAACGCTCAAGGCCTACTCGGTGGTGATGAGCTGCAA
TTCGACCAAGTACATCGGCAGCACCAACTTCACCGCAACCTCGGTGGGTACCGCGTTCGGTTCGGGTTCGAACAACAACA
ACGACGCCTTCACCTCGACGCTGACCGGCGTGTTCATCAACGGCACCGGCGAAGCGGGCGTGACCGCCTACAGCGCCATC
GGCAGCCTTTCGAGCTACTTCGACGTGGTGACCTACATTGGCGCCGTCAAGGACAGCTCGGACACCTGGTACGCTGGCTG
GACCTGCAACAGCACTGCCGCGAACTTCGGCACCACCAGCACGGACTGCACCTCGCTGCCGACCTCCTGA

Upstream 100 bases:

>100_bases
TCTGTCAGGAAACCGCAAACAGGCTGTCACTTTGCACCCCTAGATCACCCCTCGCGACGGCGGGAATCGTCTCCGCCGAT
ATCCACATGGGGGATACCAC

Downstream 100 bases:

>100_bases
TCGGCCGCCTTTCGCGAACGGGGGGTGGCCGGCGACGGTCGCCCCCTTTCTCGCAAACTTCGCAAAACACATTCCCCAGG
GGGGACCGGACAATGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKTIHGLFLAGCSGLALAGCGPTDIASPGTGGNVIINPSPTPTPTATPTPTPTVTAAAGCPTISDPQGLTDSGTITGPTG
SWRVCTLPSTINKSITLPKIAGLLYSLNGRVNVGSDLGFTKTSGEASVTLTIDPGVILFGNTGTSWLAVNRGNKINAVGT
ASAPIVFTSRDNVLGLNTETSQGQWGGVVLMGRAKITDCDATGGGTVTGGTCQRNTEGSADPALFGGQDDTDSSGSMKYV
QIRYSGYVLGSDKELQALTTEGVGSGTTLEYIQSYNSSDDGAEFFGGVVNMKHYVAVGADDDSLDIDTGLRGNFQYLLLI
QRSGAGDALMEIDSNGASTETVGGSTSAVFRQNTKIANFTAIQSAVSSNNESNDKASILIRGNSDITLANGVVYSPNNEC
LRMDDNGIVSPGTAATLKAYSVVMSCNSTKYIGSTNFTATSVGTAFGSGSNNNNDAFTSTLTGVFINGTGEAGVTAYSAI
GSLSSYFDVVTYIGAVKDSSDTWYAGWTCNSTAANFGTTSTDCTSLPTS

Sequences:

>Translated_529_residues
MKTIHGLFLAGCSGLALAGCGPTDIASPGTGGNVIINPSPTPTPTATPTPTPTVTAAAGCPTISDPQGLTDSGTITGPTG
SWRVCTLPSTINKSITLPKIAGLLYSLNGRVNVGSDLGFTKTSGEASVTLTIDPGVILFGNTGTSWLAVNRGNKINAVGT
ASAPIVFTSRDNVLGLNTETSQGQWGGVVLMGRAKITDCDATGGGTVTGGTCQRNTEGSADPALFGGQDDTDSSGSMKYV
QIRYSGYVLGSDKELQALTTEGVGSGTTLEYIQSYNSSDDGAEFFGGVVNMKHYVAVGADDDSLDIDTGLRGNFQYLLLI
QRSGAGDALMEIDSNGASTETVGGSTSAVFRQNTKIANFTAIQSAVSSNNESNDKASILIRGNSDITLANGVVYSPNNEC
LRMDDNGIVSPGTAATLKAYSVVMSCNSTKYIGSTNFTATSVGTAFGSGSNNNNDAFTSTLTGVFINGTGEAGVTAYSAI
GSLSSYFDVVTYIGAVKDSSDTWYAGWTCNSTAANFGTTSTDCTSLPTS
>Mature_529_residues
MKTIHGLFLAGCSGLALAGCGPTDIASPGTGGNVIINPSPTPTPTATPTPTPTVTAAAGCPTISDPQGLTDSGTITGPTG
SWRVCTLPSTINKSITLPKIAGLLYSLNGRVNVGSDLGFTKTSGEASVTLTIDPGVILFGNTGTSWLAVNRGNKINAVGT
ASAPIVFTSRDNVLGLNTETSQGQWGGVVLMGRAKITDCDATGGGTVTGGTCQRNTEGSADPALFGGQDDTDSSGSMKYV
QIRYSGYVLGSDKELQALTTEGVGSGTTLEYIQSYNSSDDGAEFFGGVVNMKHYVAVGADDDSLDIDTGLRGNFQYLLLI
QRSGAGDALMEIDSNGASTETVGGSTSAVFRQNTKIANFTAIQSAVSSNNESNDKASILIRGNSDITLANGVVYSPNNEC
LRMDDNGIVSPGTAATLKAYSVVMSCNSTKYIGSTNFTATSVGTAFGSGSNNNNDAFTSTLTGVFINGTGEAGVTAYSAI
GSLSSYFDVVTYIGAVKDSSDTWYAGWTCNSTAANFGTTSTDCTSLPTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53937; Mature: 53937

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIHGLFLAGCSGLALAGCGPTDIASPGTGGNVIINPSPTPTPTATPTPTPTVTAAAGC
CCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCC
PTISDPQGLTDSGTITGPTGSWRVCTLPSTINKSITLPKIAGLLYSLNGRVNVGSDLGFT
CCCCCCCCCCCCCEEECCCCCEEEEECCHHCCCCCCHHHHHEEEEECCCCEEECCCCCEE
KTSGEASVTLTIDPGVILFGNTGTSWLAVNRGNKINAVGTASAPIVFTSRDNVLGLNTET
ECCCCEEEEEEECCCEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCEEEECCCC
SQGQWGGVVLMGRAKITDCDATGGGTVTGGTCQRNTEGSADPALFGGQDDTDSSGSMKYV
CCCCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE
QIRYSGYVLGSDKELQALTTEGVGSGTTLEYIQSYNSSDDGAEFFGGVVNMKHYVAVGAD
EEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCC
DDSLDIDTGLRGNFQYLLLIQRSGAGDALMEIDSNGASTETVGGSTSAVFRQNTKIANFT
CCCEEECCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEECCCCCEEEEECCCCEEHHH
AIQSAVSSNNESNDKASILIRGNSDITLANGVVYSPNNECLRMDDNGIVSPGTAATLKAY
HHHHHHHCCCCCCCEEEEEEECCCCEEEECCEEECCCCCEEEECCCCCCCCCCHHHEEEE
SVVMSCNSTKYIGSTNFTATSVGTAFGSGSNNNNDAFTSTLTGVFINGTGEAGVTAYSAI
EEEEECCCCEEECCCCCEEEECCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH
GSLSSYFDVVTYIGAVKDSSDTWYAGWTCNSTAANFGTTSTDCTSLPTS
HHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTIHGLFLAGCSGLALAGCGPTDIASPGTGGNVIINPSPTPTPTATPTPTPTVTAAAGC
CCCEEEEHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCC
PTISDPQGLTDSGTITGPTGSWRVCTLPSTINKSITLPKIAGLLYSLNGRVNVGSDLGFT
CCCCCCCCCCCCCEEECCCCCEEEEECCHHCCCCCCHHHHHEEEEECCCCEEECCCCCEE
KTSGEASVTLTIDPGVILFGNTGTSWLAVNRGNKINAVGTASAPIVFTSRDNVLGLNTET
ECCCCEEEEEEECCCEEEECCCCCEEEEEECCCEEEEEECCCCCEEEECCCCEEEECCCC
SQGQWGGVVLMGRAKITDCDATGGGTVTGGTCQRNTEGSADPALFGGQDDTDSSGSMKYV
CCCCCCCEEEECCEEEEECCCCCCCEEECCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE
QIRYSGYVLGSDKELQALTTEGVGSGTTLEYIQSYNSSDDGAEFFGGVVNMKHYVAVGAD
EEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCC
DDSLDIDTGLRGNFQYLLLIQRSGAGDALMEIDSNGASTETVGGSTSAVFRQNTKIANFT
CCCEEECCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEECCCCCEEEEECCCCEEHHH
AIQSAVSSNNESNDKASILIRGNSDITLANGVVYSPNNECLRMDDNGIVSPGTAATLKAY
HHHHHHHCCCCCCCEEEEEEECCCCEEEECCEEECCCCCEEEECCCCCCCCCCHHHEEEE
SVVMSCNSTKYIGSTNFTATSVGTAFGSGSNNNNDAFTSTLTGVFINGTGEAGVTAYSAI
EEEEECCCCEEECCCCCEEEECCCEECCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHH
GSLSSYFDVVTYIGAVKDSSDTWYAGWTCNSTAANFGTTSTDCTSLPTS
HHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA