Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is fruB [H]
Identifier: 87200426
GI number: 87200426
Start: 2585441
End: 2587951
Strand: Reverse
Name: fruB [H]
Synonym: Saro_2413
Alternate gene names: 87200426
Gene position: 2587951-2585441 (Counterclockwise)
Preceding gene: 87200427
Following gene: 87200425
Centisome position: 72.66
GC content: 69.1
Gene sequence:
>2511_bases ATGATGGGGTCGATTGTTCTCTCTGCGCCGATTGCAGGTTGGGTCTCCGCGCTCGACGAGGTCCCTGACGGCGTCTTCTC CGCCCGCCTTCTGGGCGATGGCGTGGCCATCGATCCGGTCGAAGGCCTGCTCTGCGCGCCTTGCGATGGCGAAATCCTTT CCGTCCACGCCGCGCGCCATGCCGTCACCATGGCAGGGGAGGGCGGCGTCGAACTGCTCATGCACCTCGGCATCGACACG GTCGAGTTGAAGGGCGATGGCTTCGAGACGCTGGTCCGGGCAGGCCATCGCGTCGTGCGAGGGCAGCCTCTGCTGCGCTT CTCGCTCGACGACCTTGCCGGCCGCGCGCCCTCGCTCGTCTCGCCGGTCATCGTCACCAATGGCGACCGTTTCACGATTT CCTCCTGCACTGTCGACGCGCTCGTTGCCGTCGGAGACGACCTGATCCGGCTCGATCCCGTCGGAGTCGCCCCTTCGCCG GATCGCGCGCCGGTGGGCGAGGCGGTCGGGGCCATTGTCGTCGTGCCCCTGCCCAACGGCCTTCACGCCCGGCCCGCCGC GCGCCTGGGCGAAGCGGCGCGCGCCTTCGCCGCGGAAACGCGCATCGTGAAGAACGGCCGGGCGGTTTCCACCCGCTCGC CGGTCGGCCTGCTCGGTCTGTCCATCCAGCTGGGCGACGAAATTCTCGTCGAGGCCAGCGGACCGGACGCCTCACAGGCA GTGGCTGCGCTGGTCGACCTCATCCGCAGTGGGCTGGGCGAGGGCGCTGAACACGATGCCGCCGCAGAGCCGCGCGCCTC GTCTGCCGGCATGCCGCCCTTCGCTCCGGTGCCGGATGGCGCGCTGCGCGGCAATCTTGCCTCGCCCGGCTTCGCGCTCG GCACCTGCCACCGCCTCGACCGCTCCGAACCGGAACTGCCGGTGCAGGGAAAGGGCAAGGAAGAGGAGCGCATTCGCCTG CTCTCGGCGATGGACCATCTGCGGTCGCGGCTCGCGATCTCGTCCGAGGTCAGCCCTAAGGCAGCGATATGCAGCGCTCA CCGCGCGCTGCTGGACGATCCCGAACTCGAAGCCGCGGCCCTTTCGCGTATCGCCGAGGGCGAAGACGCCGCCCATGCCT GGCGCGAGGCTTGCCGCGCTTCGGCGGTGGTTCTGCGCGGCAGCGGTTCGGCCCGCTTTGCCGAGCGCGCGGACGACGTT CTCGACCTCGGGAGGCAGCTCGTCACCATCCTCATCGGCGAACTCGACGAGACGTTGGCGTTTCCTCCGGGGACGATCCT CCTGGCAGACGAACTGCTGCCTTCCCAGATCATGCAGCTCGGCGCCGAGGTTACCGGCATCGCGCTCGCGAACGGTGGCC CGACCTCGCATGTCGCGATCCTTGCGGCCAGCATGGGCATTCCAATGCTTGTCGCCATCGGCGATGCGCTCGCAGGCGTT CGCGCGGGCGACAAGGCCATTCTCGATGCCGACGGCGGCTTTCTCCTCCCGGCGCCCGGCGCTGCCGCGCTTGCCGAGGC AGAAGCGGAAGTTGCCGCGCGTCAGGCGAGGCGCGCCGATGCCCTCGCCAGCGCGAGCGAGCTTTGCCACAGCCGCGACG GCGCGCGCATCGAAGTCTTCGCCAATCTCGGCTCGCTCGACGATGCCCGTCGGGCAGTCTCCGCCGGGGCCGAGGGCTGC GGATTGCTGCGCACGGAATTCCTGTTTCTCGAAAGGGAAAGCGCGCCGACCGTCGCCCAGCAGGCCGAACTCTACGCCGG GATTGCCGATGCGCTGGGCGGTCGCCCCCTGATCGTCCGCCTGCTCGACATCGGCGGTGACAAGCCCGCAACCTATCTGC CCATCGCGCCAGAGGCCAATCCGGCACTCGGTTTGCGCGGCATCCGGGTGGGACTTGCCCATCCCGATGTGCTGGAAGAC CAGTTGCGCGCCATTCTTTCGGTCGAACGCGGAGGGGCGCTGCGGATCATGGTGCCGATGGTCACCGGCGTCGCCGAGGT CCGCGAGGTGCGCCAGCGGGTCGACCGGATCAGCGCCGAACTTGGCCTCGCGCAGCGCGTCGAAGTCGGCATCATGGTCG AAACGCCTGCCGCCGCCGCCACCGCGTTCCTGCTCGCGCCGCACGCCGATTTCATGTCCATCGGCACGAACGACCTGACC CAGTACGTCCTCGCGATGGACCGGGACAATCCGGCCGTGGCGGGTGGGATCGACGGGCTCCACCCGGCCGTGCTCAACCT GATCGCGCAGACCGTGCGCGGCGCGCAATCGGTCGGTCGCTGGACCGGAGTTTGCGGCGGACTTGCGGCAGATCGCCTTG CGGTGCCGCTGCTCCTCGGCCTCGGCGTGACCGAGCTGTCGGTGCCGCTGCGTCAATTGCCCGAAATCAAGGCGCTCGTG CGCGGGCTGTCCATCTCGGACTGCAAGACTCTCGCCCTCGAGGCGCTTCAGCTTGAATCCGCTGCCGAAATCCGTGCCCT GTCGCGGGCATTCGTGGAGACACTGCCATGA
Upstream 100 bases:
>100_bases GATTTCCGCACCCAGGCCACCTGGATCGGCGGGCAGCGGGTACGCTGACGCAGCTTGCCGCCCCGTCGCGCCGCGTGGCA GCCGGGGATGGAGGGAAGAA
Downstream 100 bases:
>100_bases GGAACCTTCTCGGCCTGCTCCAGCCGATCGGTCGCGCGCTGATGCTGCCGATCGCGGTGCTCCCCGTCGCGGGGCTTCTG CTGCGCCTCGGCCAGCCCGA
Product: phosphoenolpyruvate--protein phosphotransferase
Products: NA
Alternate protein names: MTP; Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system enzyme I; Phosphocarrier protein HPr; Protein H; Fructose-specific phosphotransferase enzyme IIA component; EIII-Fru; PTS system fructose-specific EIIA component [H]
Number of amino acids: Translated: 836; Mature: 836
Protein sequence:
>836_residues MMGSIVLSAPIAGWVSALDEVPDGVFSARLLGDGVAIDPVEGLLCAPCDGEILSVHAARHAVTMAGEGGVELLMHLGIDT VELKGDGFETLVRAGHRVVRGQPLLRFSLDDLAGRAPSLVSPVIVTNGDRFTISSCTVDALVAVGDDLIRLDPVGVAPSP DRAPVGEAVGAIVVVPLPNGLHARPAARLGEAARAFAAETRIVKNGRAVSTRSPVGLLGLSIQLGDEILVEASGPDASQA VAALVDLIRSGLGEGAEHDAAAEPRASSAGMPPFAPVPDGALRGNLASPGFALGTCHRLDRSEPELPVQGKGKEEERIRL LSAMDHLRSRLAISSEVSPKAAICSAHRALLDDPELEAAALSRIAEGEDAAHAWREACRASAVVLRGSGSARFAERADDV LDLGRQLVTILIGELDETLAFPPGTILLADELLPSQIMQLGAEVTGIALANGGPTSHVAILAASMGIPMLVAIGDALAGV RAGDKAILDADGGFLLPAPGAAALAEAEAEVAARQARRADALASASELCHSRDGARIEVFANLGSLDDARRAVSAGAEGC GLLRTEFLFLERESAPTVAQQAELYAGIADALGGRPLIVRLLDIGGDKPATYLPIAPEANPALGLRGIRVGLAHPDVLED QLRAILSVERGGALRIMVPMVTGVAEVREVRQRVDRISAELGLAQRVEVGIMVETPAAAATAFLLAPHADFMSIGTNDLT QYVLAMDRDNPAVAGGIDGLHPAVLNLIAQTVRGAQSVGRWTGVCGGLAADRLAVPLLLGLGVTELSVPLRQLPEIKALV RGLSISDCKTLALEALQLESAAEIRALSRAFVETLP
Sequences:
>Translated_836_residues MMGSIVLSAPIAGWVSALDEVPDGVFSARLLGDGVAIDPVEGLLCAPCDGEILSVHAARHAVTMAGEGGVELLMHLGIDT VELKGDGFETLVRAGHRVVRGQPLLRFSLDDLAGRAPSLVSPVIVTNGDRFTISSCTVDALVAVGDDLIRLDPVGVAPSP DRAPVGEAVGAIVVVPLPNGLHARPAARLGEAARAFAAETRIVKNGRAVSTRSPVGLLGLSIQLGDEILVEASGPDASQA VAALVDLIRSGLGEGAEHDAAAEPRASSAGMPPFAPVPDGALRGNLASPGFALGTCHRLDRSEPELPVQGKGKEEERIRL LSAMDHLRSRLAISSEVSPKAAICSAHRALLDDPELEAAALSRIAEGEDAAHAWREACRASAVVLRGSGSARFAERADDV LDLGRQLVTILIGELDETLAFPPGTILLADELLPSQIMQLGAEVTGIALANGGPTSHVAILAASMGIPMLVAIGDALAGV RAGDKAILDADGGFLLPAPGAAALAEAEAEVAARQARRADALASASELCHSRDGARIEVFANLGSLDDARRAVSAGAEGC GLLRTEFLFLERESAPTVAQQAELYAGIADALGGRPLIVRLLDIGGDKPATYLPIAPEANPALGLRGIRVGLAHPDVLED QLRAILSVERGGALRIMVPMVTGVAEVREVRQRVDRISAELGLAQRVEVGIMVETPAAAATAFLLAPHADFMSIGTNDLT QYVLAMDRDNPAVAGGIDGLHPAVLNLIAQTVRGAQSVGRWTGVCGGLAADRLAVPLLLGLGVTELSVPLRQLPEIKALV RGLSISDCKTLALEALQLESAAEIRALSRAFVETLP >Mature_836_residues MMGSIVLSAPIAGWVSALDEVPDGVFSARLLGDGVAIDPVEGLLCAPCDGEILSVHAARHAVTMAGEGGVELLMHLGIDT VELKGDGFETLVRAGHRVVRGQPLLRFSLDDLAGRAPSLVSPVIVTNGDRFTISSCTVDALVAVGDDLIRLDPVGVAPSP DRAPVGEAVGAIVVVPLPNGLHARPAARLGEAARAFAAETRIVKNGRAVSTRSPVGLLGLSIQLGDEILVEASGPDASQA VAALVDLIRSGLGEGAEHDAAAEPRASSAGMPPFAPVPDGALRGNLASPGFALGTCHRLDRSEPELPVQGKGKEEERIRL LSAMDHLRSRLAISSEVSPKAAICSAHRALLDDPELEAAALSRIAEGEDAAHAWREACRASAVVLRGSGSARFAERADDV LDLGRQLVTILIGELDETLAFPPGTILLADELLPSQIMQLGAEVTGIALANGGPTSHVAILAASMGIPMLVAIGDALAGV RAGDKAILDADGGFLLPAPGAAALAEAEAEVAARQARRADALASASELCHSRDGARIEVFANLGSLDDARRAVSAGAEGC GLLRTEFLFLERESAPTVAQQAELYAGIADALGGRPLIVRLLDIGGDKPATYLPIAPEANPALGLRGIRVGLAHPDVLED QLRAILSVERGGALRIMVPMVTGVAEVREVRQRVDRISAELGLAQRVEVGIMVETPAAAATAFLLAPHADFMSIGTNDLT QYVLAMDRDNPAVAGGIDGLHPAVLNLIAQTVRGAQSVGRWTGVCGGLAADRLAVPLLLGLGVTELSVPLRQLPEIKALV RGLSISDCKTLALEALQLESAAEIRALSRAFVETLP
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=582, Percent_Identity=36.426116838488, Blast_Score=317, Evalue=2e-87, Organism=Escherichia coli, GI1788726, Length=686, Percent_Identity=33.3819241982507, Blast_Score=293, Evalue=3e-80, Organism=Escherichia coli, GI48994992, Length=690, Percent_Identity=32.1739130434783, Blast_Score=281, Evalue=9e-77, Organism=Escherichia coli, GI1789193, Length=500, Percent_Identity=32.6, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI226510935, Length=335, Percent_Identity=31.044776119403, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1786894, Length=126, Percent_Identity=43.6507936507937, Blast_Score=115, Evalue=2e-26, Organism=Escherichia coli, GI1788757, Length=127, Percent_Identity=40.9448818897638, Blast_Score=110, Evalue=5e-25, Organism=Escherichia coli, GI1787994, Length=403, Percent_Identity=26.5508684863524, Blast_Score=99, Evalue=1e-21, Organism=Escherichia coli, GI1790159, Length=126, Percent_Identity=37.3015873015873, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR002114 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF00381 PTS-HPr; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 86311; Mature: 86311
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00369 PTS_HPR_HIS ; PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS00742 PEP_ENZYMES_2 ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGSIVLSAPIAGWVSALDEVPDGVFSARLLGDGVAIDPVEGLLCAPCDGEILSVHAARH CCCCEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCEEECCCCCCEEEEEHHHH AVTMAGEGGVELLMHLGIDTVELKGDGFETLVRAGHRVVRGQPLLRFSLDDLAGRAPSLV EEEECCCCHHHHHHHCCCCEEEECCCCHHHHHHCCCHHHCCCCEEEEEHHHHCCCCCCCC SPVIVTNGDRFTISSCTVDALVAVGDDLIRLDPVGVAPSPDRAPVGEAVGAIVVVPLPNG CCEEEECCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEEECCCC LHARPAARLGEAARAFAAETRIVKNGRAVSTRSPVGLLGLSIQLGDEILVEASGPDASQA CCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEECCEEEEECCCCCHHHH VAALVDLIRSGLGEGAEHDAAAEPRASSAGMPPFAPVPDGALRGNLASPGFALGTCHRLD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC RSEPELPVQGKGKEEERIRLLSAMDHLRSRLAISSEVSPKAAICSAHRALLDDPELEAAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHH LSRIAEGEDAAHAWREACRASAVVLRGSGSARFAERADDVLDLGRQLVTILIGELDETLA HHHHHCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPPGTILLADELLPSQIMQLGAEVTGIALANGGPTSHVAILAASMGIPMLVAIGDALAGV CCCCCEEEEHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHCC RAGDKAILDADGGFLLPAPGAAALAEAEAEVAARQARRADALASASELCHSRDGARIEVF CCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE ANLGSLDDARRAVSAGAEGCGLLRTEFLFLERESAPTVAQQAELYAGIADALGGRPLIVR ECCCCCHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE LLDIGGDKPATYLPIAPEANPALGLRGIRVGLAHPDVLEDQLRAILSVERGGALRIMVPM EEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHH VTGVAEVREVRQRVDRISAELGLAQRVEVGIMVETPAAAATAFLLAPHADFMSIGTNDLT HHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECCHHHHHHHHCCCCCHHHHCCCHHHH QYVLAMDRDNPAVAGGIDGLHPAVLNLIAQTVRGAQSVGRWTGVCGGLAADRLAVPLLLG HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGVTELSVPLRQLPEIKALVRGLSISDCKTLALEALQLESAAEIRALSRAFVETLP CCHHHHHCCHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMGSIVLSAPIAGWVSALDEVPDGVFSARLLGDGVAIDPVEGLLCAPCDGEILSVHAARH CCCCEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCEEECCCCCCEEEEEHHHH AVTMAGEGGVELLMHLGIDTVELKGDGFETLVRAGHRVVRGQPLLRFSLDDLAGRAPSLV EEEECCCCHHHHHHHCCCCEEEECCCCHHHHHHCCCHHHCCCCEEEEEHHHHCCCCCCCC SPVIVTNGDRFTISSCTVDALVAVGDDLIRLDPVGVAPSPDRAPVGEAVGAIVVVPLPNG CCEEEECCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEEECCCC LHARPAARLGEAARAFAAETRIVKNGRAVSTRSPVGLLGLSIQLGDEILVEASGPDASQA CCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEEECCEEEEECCCCCHHHH VAALVDLIRSGLGEGAEHDAAAEPRASSAGMPPFAPVPDGALRGNLASPGFALGTCHRLD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHCC RSEPELPVQGKGKEEERIRLLSAMDHLRSRLAISSEVSPKAAICSAHRALLDDPELEAAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHH LSRIAEGEDAAHAWREACRASAVVLRGSGSARFAERADDVLDLGRQLVTILIGELDETLA HHHHHCCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FPPGTILLADELLPSQIMQLGAEVTGIALANGGPTSHVAILAASMGIPMLVAIGDALAGV CCCCCEEEEHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHHCC RAGDKAILDADGGFLLPAPGAAALAEAEAEVAARQARRADALASASELCHSRDGARIEVF CCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE ANLGSLDDARRAVSAGAEGCGLLRTEFLFLERESAPTVAQQAELYAGIADALGGRPLIVR ECCCCCHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE LLDIGGDKPATYLPIAPEANPALGLRGIRVGLAHPDVLEDQLRAILSVERGGALRIMVPM EEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHH VTGVAEVREVRQRVDRISAELGLAQRVEVGIMVETPAAAATAFLLAPHADFMSIGTNDLT HHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEEECCHHHHHHHHCCCCCHHHHCCCHHHH QYVLAMDRDNPAVAGGIDGLHPAVLNLIAQTVRGAQSVGRWTGVCGGLAADRLAVPLLLG HHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LGVTELSVPLRQLPEIKALVRGLSISDCKTLALEALQLESAAEIRALSRAFVETLP CCHHHHHCCHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7496537; 12024217; 1655739 [H]