Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200421
Identifier: 87200421
GI number: 87200421
Start: 2576232
End: 2576624
Strand: Reverse
Name: 87200421
Synonym: Saro_2408
Alternate gene names: NA
Gene position: 2576624-2576232 (Counterclockwise)
Preceding gene: 87200422
Following gene: 87200420
Centisome position: 72.34
GC content: 69.72
Gene sequence:
>393_bases GTGAGGCCGGAAGACCGCCGCGCCGCCGAGCATGATTGCGCCCGCCTGATCGCGCTCTACGCCAACCTCAACGACGAGGC GCGCTGGGACGAGGTTGCGGCCCTTTATGCGGAAGACGGCGTCATGTATCGCCCGACCGCGCCGGATGTCGGCGTGGAAG GGCGCGAGGCGATCCTCGCCGCGTTCAAGGCGCGCCCGCCGCGCACCACGCGGCACGTCTGCTCGAACGTGGTCATCGAC GTCGAAGGCCCCGCTACGGCGCGGGGCACCAGCGCGATGCTGCTGTTCACCAGCGAGGGCGCGCCGCTCGTGGGCTCGTT CCACGACCGTTTCTGCCTGACCCCGGATGGCTGGCGTTTTGCCGAGCGGCGCGGAAGCCTGATCTTCAAGTGA
Upstream 100 bases:
>100_bases GCTTCGGCACCTTCGCGGGCTATGGCAAGCTCGATCCCATCGTCACGTGGCGCAAGCTCCGGTCGCTGCGGGAAGGCGCG GATATCGCCGCGAGCCGCCT
Downstream 100 bases:
>100_bases ACGCCTCAGCCGCCTCCAACCCGGTCAAGTCCGCGATGCGCACGCTCGACGTGATCGAGTACGTTGTCGCGAACCGGCAG GGCGCCGTGGCGCAGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK
Sequences:
>Translated_130_residues MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK >Mature_130_residues MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14406; Mature: 14406
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILA CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEECCCCCCCCCCCHHHHHH AFKARPPRTTRHVCSNVVIDVEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRF HHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCEEECCCCCHH AERRGSLIFK HHHCCCCCCC >Mature Secondary Structure MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILA CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEECCCCCCCCCCCHHHHHH AFKARPPRTTRHVCSNVVIDVEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRF HHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCEEECCCCCHH AERRGSLIFK HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA