Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200421

Identifier: 87200421

GI number: 87200421

Start: 2576232

End: 2576624

Strand: Reverse

Name: 87200421

Synonym: Saro_2408

Alternate gene names: NA

Gene position: 2576624-2576232 (Counterclockwise)

Preceding gene: 87200422

Following gene: 87200420

Centisome position: 72.34

GC content: 69.72

Gene sequence:

>393_bases
GTGAGGCCGGAAGACCGCCGCGCCGCCGAGCATGATTGCGCCCGCCTGATCGCGCTCTACGCCAACCTCAACGACGAGGC
GCGCTGGGACGAGGTTGCGGCCCTTTATGCGGAAGACGGCGTCATGTATCGCCCGACCGCGCCGGATGTCGGCGTGGAAG
GGCGCGAGGCGATCCTCGCCGCGTTCAAGGCGCGCCCGCCGCGCACCACGCGGCACGTCTGCTCGAACGTGGTCATCGAC
GTCGAAGGCCCCGCTACGGCGCGGGGCACCAGCGCGATGCTGCTGTTCACCAGCGAGGGCGCGCCGCTCGTGGGCTCGTT
CCACGACCGTTTCTGCCTGACCCCGGATGGCTGGCGTTTTGCCGAGCGGCGCGGAAGCCTGATCTTCAAGTGA

Upstream 100 bases:

>100_bases
GCTTCGGCACCTTCGCGGGCTATGGCAAGCTCGATCCCATCGTCACGTGGCGCAAGCTCCGGTCGCTGCGGGAAGGCGCG
GATATCGCCGCGAGCCGCCT

Downstream 100 bases:

>100_bases
ACGCCTCAGCCGCCTCCAACCCGGTCAAGTCCGCGATGCGCACGCTCGACGTGATCGAGTACGTTGTCGCGAACCGGCAG
GGCGCCGTGGCGCAGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID
VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK

Sequences:

>Translated_130_residues
MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID
VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK
>Mature_130_residues
MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILAAFKARPPRTTRHVCSNVVID
VEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRFAERRGSLIFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14406; Mature: 14406

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEECCCCCCCCCCCHHHHHH
AFKARPPRTTRHVCSNVVIDVEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRF
HHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCEEECCCCCHH
AERRGSLIFK
HHHCCCCCCC
>Mature Secondary Structure
MRPEDRRAAEHDCARLIALYANLNDEARWDEVAALYAEDGVMYRPTAPDVGVEGREAILA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEECCCCCCCCCCCHHHHHH
AFKARPPRTTRHVCSNVVIDVEGPATARGTSAMLLFTSEGAPLVGSFHDRFCLTPDGWRF
HHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCEEECCCCCHH
AERRGSLIFK
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA