Click here to switch to the map view.

The map label for this gene is 87200408

Identifier: 87200408

GI number: 87200408

Start: 2562266

End: 2563135

Strand: Reverse

Name: 87200408

Synonym: Saro_2395

Alternate gene names: NA

Gene position: 2563135-2562266 (Counterclockwise)

Preceding gene: 87200409

Following gene: 87200405

Centisome position: 71.97

GC content: 67.47

Gene sequence:

>870_bases
ATGGACGAGGCGCAGACCAGCAAGCCCGGAACGCTGCGGCGGATCTTCGACTTTCCCGCAACCCCGATGGTGATCGAGTT
CCTGGCGGTGGGGCTCTTCGCTTCGCTGGCATCGGCGCTGCTGGTGAAGGTTCTCCCGCGCGAGGGCTTCGTCGATTTTC
TTGGCGGCCTCGCGCTGGCGGTGCTGGTGACGGCGCTTTACCTTGCCTGCCGGCGCTGGATCGAGCGGCGGCCCAATGAC
GAACTGCCCTTGCCGCGTCTCGCCCGCGAACTGCCGCTGGGGCTGCTGATCGGGGCGGGGCTGTTCACCTTGATGACCGG
CATCGTGGCGGTGCTCGGCGGCATTTCGATCGAGCGGGTGAACGGCGTTGGCGCGCTCTGGCCGATGCTGGCGATGGCGG
TGACTTCCGGCACAGTCGAGGAGATCCTGTTTCGCGGCATCCTCCTTCGTCATATCGAGGCCATGCTGGGCACATGGACG
GCGCTGTTCGTCACGTCGGCGCTGTTCGGGCTGGCACACCTTGCCAATCCCGATTCGAGCCTTTTTGCAGCCTTCGCCAT
CGCGATGGAGGCGGGCATTCTGCTGGGCGCGGCCTATCTGTGGACGCGGCGGCTGTGGGTGCCGATGGGCATCCATGCCG
CATGGAACTTCACGCAAGGCTGGGTCTTCAGCGTGCCGGTTTCGGGCGGCGAGGTGCCGACCGGGCTGTTCGTCACCACG
CGGAGCGGGCCGGACTGGCTGACGGGTGGCGGCTTCGGGCTGGAGGCGAGCGTGATCGCGATGGCGGTCGCGACGGGCGC
GGGACTGCTCCTGTTGGTGCGGGTGGTGCGACAGGGCGGGATCAGGCCGCCGATGTGGGTAAAGCGCTAG

Upstream 100 bases:

>100_bases
GCGTGATCCGTTCCGACGGGTCGCTGGGCGGCTATGCCTATGGGCTTGAGATCAAGCGGCGGTTGCTGGACAAGGAACGC
GACGCGAAGGGGGAATGACG

Downstream 100 bases:

>100_bases
CGCGCCCATCCGGGCTTTGCGGGATCGAGCGTCCGGAGGAAGGCCTCGGCGCTGAGGAGATATTCCGCGCGCTTTTCGTC
GCTCATTCGCCGCCAGGTGG

Product: abortive infection protein

Products: NA

Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease; CAAX Amino Protease Family Protein; Transmembrane Protein; Protease CAAX Amino Terminal Family; Ypothetical Protein SMU.; Caax Amino Terminal Protease Family; Protease; CAAX Amino Protease

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MDEAQTSKPGTLRRIFDFPATPMVIEFLAVGLFASLASALLVKVLPREGFVDFLGGLALAVLVTALYLACRRWIERRPND
ELPLPRLARELPLGLLIGAGLFTLMTGIVAVLGGISIERVNGVGALWPMLAMAVTSGTVEEILFRGILLRHIEAMLGTWT
ALFVTSALFGLAHLANPDSSLFAAFAIAMEAGILLGAAYLWTRRLWVPMGIHAAWNFTQGWVFSVPVSGGEVPTGLFVTT
RSGPDWLTGGGFGLEASVIAMAVATGAGLLLLVRVVRQGGIRPPMWVKR

Sequences:

>Translated_289_residues
MDEAQTSKPGTLRRIFDFPATPMVIEFLAVGLFASLASALLVKVLPREGFVDFLGGLALAVLVTALYLACRRWIERRPND
ELPLPRLARELPLGLLIGAGLFTLMTGIVAVLGGISIERVNGVGALWPMLAMAVTSGTVEEILFRGILLRHIEAMLGTWT
ALFVTSALFGLAHLANPDSSLFAAFAIAMEAGILLGAAYLWTRRLWVPMGIHAAWNFTQGWVFSVPVSGGEVPTGLFVTT
RSGPDWLTGGGFGLEASVIAMAVATGAGLLLLVRVVRQGGIRPPMWVKR
>Mature_289_residues
MDEAQTSKPGTLRRIFDFPATPMVIEFLAVGLFASLASALLVKVLPREGFVDFLGGLALAVLVTALYLACRRWIERRPND
ELPLPRLARELPLGLLIGAGLFTLMTGIVAVLGGISIERVNGVGALWPMLAMAVTSGTVEEILFRGILLRHIEAMLGTWT
ALFVTSALFGLAHLANPDSSLFAAFAIAMEAGILLGAAYLWTRRLWVPMGIHAAWNFTQGWVFSVPVSGGEVPTGLFVTT
RSGPDWLTGGGFGLEASVIAMAVATGAGLLLLVRVVRQGGIRPPMWVKR

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30920; Mature: 30920

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEAQTSKPGTLRRIFDFPATPMVIEFLAVGLFASLASALLVKVLPREGFVDFLGGLALA
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VLVTALYLACRRWIERRPNDELPLPRLARELPLGLLIGAGLFTLMTGIVAVLGGISIERV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NGVGALWPMLAMAVTSGTVEEILFRGILLRHIEAMLGTWTALFVTSALFGLAHLANPDSS
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LFAAFAIAMEAGILLGAAYLWTRRLWVPMGIHAAWNFTQGWVFSVPVSGGEVPTGLFVTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCEEEEE
RSGPDWLTGGGFGLEASVIAMAVATGAGLLLLVRVVRQGGIRPPMWVKR
CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDEAQTSKPGTLRRIFDFPATPMVIEFLAVGLFASLASALLVKVLPREGFVDFLGGLALA
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VLVTALYLACRRWIERRPNDELPLPRLARELPLGLLIGAGLFTLMTGIVAVLGGISIERV
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NGVGALWPMLAMAVTSGTVEEILFRGILLRHIEAMLGTWTALFVTSALFGLAHLANPDSS
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LFAAFAIAMEAGILLGAAYLWTRRLWVPMGIHAAWNFTQGWVFSVPVSGGEVPTGLFVTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCEEEEE
RSGPDWLTGGGFGLEASVIAMAVATGAGLLLLVRVVRQGGIRPPMWVKR
CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA