Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87200401
Identifier: 87200401
GI number: 87200401
Start: 2553517
End: 2554197
Strand: Reverse
Name: 87200401
Synonym: Saro_2388
Alternate gene names: NA
Gene position: 2554197-2553517 (Counterclockwise)
Preceding gene: 87200402
Following gene: 87200400
Centisome position: 71.72
GC content: 67.11
Gene sequence:
>681_bases ATGAGCCAGATGTCCGTCAGCGAAGCCGTTGTTTCCCGCCGCTCGATCCGCCGCTTCAAGCCGGAGCCGGTCTCGCGCGA GGTTCTCGAACGCGTGCTGGACAAGGCGCAGCGGGCTCCGTCCGGAGGCAACGTGCAGCCGTGGAACGCGCGGGTCGTTG CCGGAGCGTCGCTTGCCCGGCTGGTGGCGACCGTGGCCGAGGTGATCCCGCAGGGCCGCGCCGCGCACGCGCCGGAATAC GCGATCTACCCGCCCGAGCTGGACGGCGTCTACGAGGCGCGGCGGTTCGGCGTGGGAGAGGCGATGTATGCCGCTCTCGG GATCGGGCGCGAGGACAAGCGCGGGCGGCTGACGCAATTCATGGACAACTTTCGCGGTTTCGGCGCGCCGGTGCTGATGC TGGTCCATACGCCGCGCTACATGGGACCGCCGCAGTGGTCGGACATCGGCATGTGGTTGCAGACCGTGATGCTGCTGCTG CGCGAGGAAGGCCTCGATTCCTGTCCGCAGGAGGCCTGGGCCGTCTATCAGAAGCAGGTCCGCGAATGCGTGGCGATTCC GGACGACCATGTGTTCTTCTGCGGTCTCGCCATCGGACATCGCGACCCGGAGGCGGCGGTCAACCAATTCGACGTTCCCC GCGCGCCTTTGTCGGAAGTTGTTGCTTTCGAAGGCTTCTGA
Upstream 100 bases:
>100_bases GAACAGCTTGGCGGCACGATCATCGAGCAGCTTGCGGACCTGTTCGAGGACGAATAGGCGCGGCTTGACGGCCCGTTCTT AACCGGGCAGTTAAACCGGC
Downstream 100 bases:
>100_bases CGTCGATTTGATACAAGACAGGCGCCGCCGGGTGGCGTATCGGCATTGGCAGTGGCGCGCCAAAGCGCCTATGATGTGCG CAACAGCACAAGAATCTTCG
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NfnB Protein; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSQMSVSEAVVSRRSIRRFKPEPVSREVLERVLDKAQRAPSGGNVQPWNARVVAGASLARLVATVAEVIPQGRAAHAPEY AIYPPELDGVYEARRFGVGEAMYAALGIGREDKRGRLTQFMDNFRGFGAPVLMLVHTPRYMGPPQWSDIGMWLQTVMLLL REEGLDSCPQEAWAVYQKQVRECVAIPDDHVFFCGLAIGHRDPEAAVNQFDVPRAPLSEVVAFEGF
Sequences:
>Translated_226_residues MSQMSVSEAVVSRRSIRRFKPEPVSREVLERVLDKAQRAPSGGNVQPWNARVVAGASLARLVATVAEVIPQGRAAHAPEY AIYPPELDGVYEARRFGVGEAMYAALGIGREDKRGRLTQFMDNFRGFGAPVLMLVHTPRYMGPPQWSDIGMWLQTVMLLL REEGLDSCPQEAWAVYQKQVRECVAIPDDHVFFCGLAIGHRDPEAAVNQFDVPRAPLSEVVAFEGF >Mature_225_residues SQMSVSEAVVSRRSIRRFKPEPVSREVLERVLDKAQRAPSGGNVQPWNARVVAGASLARLVATVAEVIPQGRAAHAPEYA IYPPELDGVYEARRFGVGEAMYAALGIGREDKRGRLTQFMDNFRGFGAPVLMLVHTPRYMGPPQWSDIGMWLQTVMLLLR EEGLDSCPQEAWAVYQKQVRECVAIPDDHVFFCGLAIGHRDPEAAVNQFDVPRAPLSEVVAFEGF
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25095; Mature: 24964
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMSVSEAVVSRRSIRRFKPEPVSREVLERVLDKAQRAPSGGNVQPWNARVVAGASLAR CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH LVATVAEVIPQGRAAHAPEYAIYPPELDGVYEARRFGVGEAMYAALGIGREDKRGRLTQF HHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH MDNFRGFGAPVLMLVHTPRYMGPPQWSDIGMWLQTVMLLLREEGLDSCPQEAWAVYQKQV HHHHCCCCCCEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RECVAIPDDHVFFCGLAIGHRDPEAAVNQFDVPRAPLSEVVAFEGF HHHHCCCCCCEEEEEHHHCCCCHHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure SQMSVSEAVVSRRSIRRFKPEPVSREVLERVLDKAQRAPSGGNVQPWNARVVAGASLAR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHH LVATVAEVIPQGRAAHAPEYAIYPPELDGVYEARRFGVGEAMYAALGIGREDKRGRLTQF HHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHH MDNFRGFGAPVLMLVHTPRYMGPPQWSDIGMWLQTVMLLLREEGLDSCPQEAWAVYQKQV HHHHCCCCCCEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RECVAIPDDHVFFCGLAIGHRDPEAAVNQFDVPRAPLSEVVAFEGF HHHHCCCCCCEEEEEHHHCCCCHHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA