Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is cyaA [H]
Identifier: 87200399
GI number: 87200399
Start: 2548153
End: 2550198
Strand: Reverse
Name: cyaA [H]
Synonym: Saro_2386
Alternate gene names: 87200399
Gene position: 2550198-2548153 (Counterclockwise)
Preceding gene: 87200400
Following gene: 87200398
Centisome position: 71.6
GC content: 65.84
Gene sequence:
>2046_bases ATGCCGCAGAACCGGCGCGATGCGTCGCAGGGGGCGAGCGAGATCGGGCGATCGGCCCGGCGCAGCCTGTCGCAACTTGG CTGGCAACGCACGGCCATCGCGCTGCTGCTGCTGGCGCTGGCGCTGTTCATCGCGATGAGGAGCTGGCAGCTTCCGCTGC TGCGCGATGCGGAGGCCGCGCTTTACGATATCCGCGCCGCGAATTTCGCACCGCCAACGGACACCGACAAGCGCATCACG CTGGTGGTCTATACCGCCGATACGAACCGCGCGACGGGCCAGATTTCGCCGGTCGACCGCACGATCCTGGCCAAGGCGCT GACGCAGATCGACCAGCTCGGCGCGAAGGGCGTGGGCATCGACGTCCTCTTCGACAGCCCGCAGGACGACGACGAGCTTC TCCGCGCCTCGCTCAAGGCCATGAAGACGCCTGTCTTCCTTGCCTATGCGGACAATCGCACAAACCCGGAAGCTATCACC TACGAGCAGGAGCAGGACCTCAAGGCGTTCATGGCGAGCGCCCAGACGAGCATGGTCAAGCCTGCCTCGATCCTGCTGGA GACCGATGCCGACGGTGTCGCGCGTCGCTGGCCGCGTCAGTATTCCGGACTGCCGCCGTTGCTTTCGCTGGCGCTGACGA ATGCCGGGCCCGATGCCGATGGGCGCTTTGCCACCTATACCGGGCCGATCCGGTACCGCGTGCCTACGGCAAGCGACCGG CCGGTCTTCGACAAGATACCCATCGACCTGCTCGCCGATCCGGAGACGGCGCCGCTTGTCGCCGACGCGGTCAAGGGTCG CTACGTCCTTATCGGCGGTGACTTTTCCGACTTCGACCAATTCGACACGCCATTCACGAGGACCGGCAATCCGGTGACGG GCGAGACGCGGATGATCGGGGTCGAGGTCCACGCCTCGATGCTGGCGCAACTGCTCGACAAGGCATGGAAAGCGCCGCCG GCAAGCTGGGCCAAGGTCTTGGCCGCGGTGCTGGTGGTGGCACTCGGCGCGGCGACCGCGGCGGCGCAGGTGCGCACCTG GCTGCTGGCCGTGGCCGTGATTGCCCAGTTCGCGCTGTTCCTGGCGGTGCCGTTCCTGGTCGAGCGGGCCGGTTACGACA CGCTGGATCTGCCCGCGACGGGGTGGCTGATCGGCTGGGCCATCGCCTTTACCGCCGTCAGTTCCGGCTTGCGGGCCATC AACGCGGCACAGCGGGAGTTCGCTCAGGGCGCGCTGGGCAAGTATCTTCCGCGTTCGGTGGCGGCCGAGATCATGCGCAA TCCCGAGCGGCTTTCGCTGCACGGAGAGAAGCGCGAGATATTCTGCCTGTTCAGCGACCTGGAAGGCTTCACCAAGCTTA CCCATGCGGTCGAACCCGAAATGATCGCGCGGTTGCTGAACGACTATCTCGACCGGCTGAGCGCGGTGGTGCTTCAATAC GGCGGAACGCTCGACAAGTTCGTGGGCGATGCGGTGGTCGCATTCTGGGGGGCGCCGATCGCCTATCCGGACGATGGCGA GCGCGCGGTCAAGGCCGCATATGCGATGTATCTGGCGGGTGAGGAGTTCCGCAAGTCGGTGCCCGAAGGCGTGCCGAAGA TCGGCCGGACGCGGGTAGGCCTCCATTACGGCGAAGCGGTGGTCGGCAATTTCGGCGGGGAAGGGCGCATCCAGTACACT GCGCTCGGCGATGCGATGAACACCGCTGCCCGGCTTGAAGGCGCGAACAAGCCGCTCGATACCAAGGTGCTGGTCAGCCG TGAGGCGGCGGAGCGTTCGGGACTGGACTGGTTCCGGCCGATGGGCACCGTTACCCTGCGCGGGCGGCGGACTCCGGTGG AAATCTTCGAACCGGTACCGGATCTCGAAGCCGAGTGGCGCGGGCTGGCAGTGGAAGCGCTGAGCGCTCACGAAGCGGGC GAGGCGGACCGTGTGCAGGCCCTCACAGACAAGATCCTCGAATCGGCGCACAACGACGATGCGATGATGAACCTGATCCA GAGACTGCGTCAGACGCACAAGGGAGAGAGTTATGTGCTTGGTTGA
Upstream 100 bases:
>100_bases TGACGGTGCGCGGCCGCTTGTTTCGCGGGACGCGCGCGTGGCAATGAAGGCGACCGGCATGGCCGCTGGACCGGCCAAGG TTTCGGGGGGGAACTGACGA
Downstream 100 bases:
>100_bases TACGCCCAGGAAACGTCAGGGGGGCGTAAGGACCTTTGCTGCCGGGATGGCTGCACTGGCGGGCGTCATGCTCGCGGGGA GCGCGGTCGCGCAATCGGTC
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MPQNRRDASQGASEIGRSARRSLSQLGWQRTAIALLLLALALFIAMRSWQLPLLRDAEAALYDIRAANFAPPTDTDKRIT LVVYTADTNRATGQISPVDRTILAKALTQIDQLGAKGVGIDVLFDSPQDDDELLRASLKAMKTPVFLAYADNRTNPEAIT YEQEQDLKAFMASAQTSMVKPASILLETDADGVARRWPRQYSGLPPLLSLALTNAGPDADGRFATYTGPIRYRVPTASDR PVFDKIPIDLLADPETAPLVADAVKGRYVLIGGDFSDFDQFDTPFTRTGNPVTGETRMIGVEVHASMLAQLLDKAWKAPP ASWAKVLAAVLVVALGAATAAAQVRTWLLAVAVIAQFALFLAVPFLVERAGYDTLDLPATGWLIGWAIAFTAVSSGLRAI NAAQREFAQGALGKYLPRSVAAEIMRNPERLSLHGEKREIFCLFSDLEGFTKLTHAVEPEMIARLLNDYLDRLSAVVLQY GGTLDKFVGDAVVAFWGAPIAYPDDGERAVKAAYAMYLAGEEFRKSVPEGVPKIGRTRVGLHYGEAVVGNFGGEGRIQYT ALGDAMNTAARLEGANKPLDTKVLVSREAAERSGLDWFRPMGTVTLRGRRTPVEIFEPVPDLEAEWRGLAVEALSAHEAG EADRVQALTDKILESAHNDDAMMNLIQRLRQTHKGESYVLG
Sequences:
>Translated_681_residues MPQNRRDASQGASEIGRSARRSLSQLGWQRTAIALLLLALALFIAMRSWQLPLLRDAEAALYDIRAANFAPPTDTDKRIT LVVYTADTNRATGQISPVDRTILAKALTQIDQLGAKGVGIDVLFDSPQDDDELLRASLKAMKTPVFLAYADNRTNPEAIT YEQEQDLKAFMASAQTSMVKPASILLETDADGVARRWPRQYSGLPPLLSLALTNAGPDADGRFATYTGPIRYRVPTASDR PVFDKIPIDLLADPETAPLVADAVKGRYVLIGGDFSDFDQFDTPFTRTGNPVTGETRMIGVEVHASMLAQLLDKAWKAPP ASWAKVLAAVLVVALGAATAAAQVRTWLLAVAVIAQFALFLAVPFLVERAGYDTLDLPATGWLIGWAIAFTAVSSGLRAI NAAQREFAQGALGKYLPRSVAAEIMRNPERLSLHGEKREIFCLFSDLEGFTKLTHAVEPEMIARLLNDYLDRLSAVVLQY GGTLDKFVGDAVVAFWGAPIAYPDDGERAVKAAYAMYLAGEEFRKSVPEGVPKIGRTRVGLHYGEAVVGNFGGEGRIQYT ALGDAMNTAARLEGANKPLDTKVLVSREAAERSGLDWFRPMGTVTLRGRRTPVEIFEPVPDLEAEWRGLAVEALSAHEAG EADRVQALTDKILESAHNDDAMMNLIQRLRQTHKGESYVLG >Mature_680_residues PQNRRDASQGASEIGRSARRSLSQLGWQRTAIALLLLALALFIAMRSWQLPLLRDAEAALYDIRAANFAPPTDTDKRITL VVYTADTNRATGQISPVDRTILAKALTQIDQLGAKGVGIDVLFDSPQDDDELLRASLKAMKTPVFLAYADNRTNPEAITY EQEQDLKAFMASAQTSMVKPASILLETDADGVARRWPRQYSGLPPLLSLALTNAGPDADGRFATYTGPIRYRVPTASDRP VFDKIPIDLLADPETAPLVADAVKGRYVLIGGDFSDFDQFDTPFTRTGNPVTGETRMIGVEVHASMLAQLLDKAWKAPPA SWAKVLAAVLVVALGAATAAAQVRTWLLAVAVIAQFALFLAVPFLVERAGYDTLDLPATGWLIGWAIAFTAVSSGLRAIN AAQREFAQGALGKYLPRSVAAEIMRNPERLSLHGEKREIFCLFSDLEGFTKLTHAVEPEMIARLLNDYLDRLSAVVLQYG GTLDKFVGDAVVAFWGAPIAYPDDGERAVKAAYAMYLAGEEFRKSVPEGVPKIGRTRVGLHYGEAVVGNFGGEGRIQYTA LGDAMNTAARLEGANKPLDTKVLVSREAAERSGLDWFRPMGTVTLRGRRTPVEIFEPVPDLEAEWRGLAVEALSAHEAGE ADRVQALTDKILESAHNDDAMMNLIQRLRQTHKGESYVLG
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Drosophila melanogaster, GI161078020, Length=214, Percent_Identity=28.5046728971963, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 74093; Mature: 73962
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQNRRDASQGASEIGRSARRSLSQLGWQRTAIALLLLALALFIAMRSWQLPLLRDAEAA CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LYDIRAANFAPPTDTDKRITLVVYTADTNRATGQISPVDRTILAKALTQIDQLGAKGVGI HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE DVLFDSPQDDDELLRASLKAMKTPVFLAYADNRTNPEAITYEQEQDLKAFMASAQTSMVK EEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCC PASILLETDADGVARRWPRQYSGLPPLLSLALTNAGPDADGRFATYTGPIRYRVPTASDR CHHEEEECCCCHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCC PVFDKIPIDLLADPETAPLVADAVKGRYVLIGGDFSDFDQFDTPFTRTGNPVTGETRMIG CCHHCCCCCEECCCCCCCHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCEEEE VEVHASMLAQLLDKAWKAPPASWAKVLAAVLVVALGAATAAAQVRTWLLAVAVIAQFALF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVPFLVERAGYDTLDLPATGWLIGWAIAFTAVSSGLRAINAAQREFAQGALGKYLPRSV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEIMRNPERLSLHGEKREIFCLFSDLEGFTKLTHAVEPEMIARLLNDYLDRLSAVVLQY HHHHHCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GGTLDKFVGDAVVAFWGAPIAYPDDGERAVKAAYAMYLAGEEFRKSVPEGVPKIGRTRVG CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEC LHYGEAVVGNFGGEGRIQYTALGDAMNTAARLEGANKPLDTKVLVSREAAERSGLDWFRP EEECCHHEECCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCC MGTVTLRGRRTPVEIFEPVPDLEAEWRGLAVEALSAHEAGEADRVQALTDKILESAHNDD CCCEEECCCCCCHHHHCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCH AMMNLIQRLRQTHKGESYVLG HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PQNRRDASQGASEIGRSARRSLSQLGWQRTAIALLLLALALFIAMRSWQLPLLRDAEAA CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LYDIRAANFAPPTDTDKRITLVVYTADTNRATGQISPVDRTILAKALTQIDQLGAKGVGI HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE DVLFDSPQDDDELLRASLKAMKTPVFLAYADNRTNPEAITYEQEQDLKAFMASAQTSMVK EEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHCC PASILLETDADGVARRWPRQYSGLPPLLSLALTNAGPDADGRFATYTGPIRYRVPTASDR CHHEEEECCCCHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCCCC PVFDKIPIDLLADPETAPLVADAVKGRYVLIGGDFSDFDQFDTPFTRTGNPVTGETRMIG CCHHCCCCCEECCCCCCCHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCEEEE VEVHASMLAQLLDKAWKAPPASWAKVLAAVLVVALGAATAAAQVRTWLLAVAVIAQFALF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVPFLVERAGYDTLDLPATGWLIGWAIAFTAVSSGLRAINAAQREFAQGALGKYLPRSV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEIMRNPERLSLHGEKREIFCLFSDLEGFTKLTHAVEPEMIARLLNDYLDRLSAVVLQY HHHHHCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GGTLDKFVGDAVVAFWGAPIAYPDDGERAVKAAYAMYLAGEEFRKSVPEGVPKIGRTRVG CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEC LHYGEAVVGNFGGEGRIQYTALGDAMNTAARLEGANKPLDTKVLVSREAAERSGLDWFRP EEECCHHEECCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCC MGTVTLRGRRTPVEIFEPVPDLEAEWRGLAVEALSAHEAGEADRVQALTDKILESAHNDD CCCEEECCCCCCHHHHCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCH AMMNLIQRLRQTHKGESYVLG HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]