Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200364

Identifier: 87200364

GI number: 87200364

Start: 2496607

End: 2497980

Strand: Reverse

Name: 87200364

Synonym: Saro_2350

Alternate gene names: NA

Gene position: 2497980-2496607 (Counterclockwise)

Preceding gene: 87200366

Following gene: 87200362

Centisome position: 70.14

GC content: 68.27

Gene sequence:

>1374_bases
TTGGCAGAGTACTGGACGCAAGATAGGCAAGGTTTCATGCGAAACAAGTTCCGCGCCGCTGCGCTAACCGCCGCCATTTT
CGTCCCCCTTGCCGCACAGGCCGAAGAACCGAAAGGCGATGTCGCCTGGGACATTCTCGCCGGCCTCACCAGCGAAGTCG
GCCCGCGCATGCCGGGCAGCGAGGCCGAAGCGCGCGCGCGAACATGGGCGCAGGCGCGGCTCGAGGCGCTCGGTTTCAGC
GGCGTCGCCATCGAACCGTTCACGATCCGCGGCTACGTGCGCGGCCGCGACGAGGCGAGCCTCAAGGCCCCGATCCCGTT
CCGCCTGGCTGTCACCGCACTTGGCTACAGCGGCACAACGCCCGACAAGGGCATCGAAGGCGACGTCGTCTACTTCCCCA
CGCTCGATGCGCTGAAGGCAGCGCCCGCCGGATCGCTTGCCGGAAAGATCGCCTTCATCGACCATGCGATGAAGCGCAGC
CAGGATGGCAGCGGCTATGGTCCCTACGGCAACGTTCGTCGCCAGGGGCCCGCCATCGCTGCGGCCAAGGGGGCCATGGG
CGTCGTCATCCGCTCCATCGGCACGGACAGCCACCGCAATCCCCACACCGGCGGCACGACGTTTCCCGATGGCGTGAGCC
CGATCCCGGCGGGCGCAGTGTCCAACCCGGACGCCGATCTCATCGCCCGCATCGCCGGCGGCGGCAAGCCGATGCGGCTG
GCGATGACGCTTACCGGCAGGACGACCGACAACCTGCCTTCGGGCAATGTCATCGGCGACTTGCCCGGGCGCGACCCATC
GCTTCCCCCCATCCTGCTCGGCTGCCACCTCGATAGCTGGGACCTCGGCACGGGCGCCATCGACGATGCGGCGGGCTGCG
CCATCATCACCGCCGCCGCGCTCAACGCGCAGGAAGGCGGCAGGCCGCTGCGCACGATCCGCGTCCTGTGGGCGGGGTCC
GAGGAACTCGGCGGCTTCGGCGGCAAGGCCTATGCGCAAAGGCACGCGGAGCCGCACGCGCTCGCGATGGAGAGCGATTT
CGGCGCCGCGCGGGTCTGGCGTGTCAATTTCAACCTTGGCAGTGCCAGCAAGCCCCTGGCCGACCGTATCGCCGCCGCCC
TTTCACCGATGGGCATCGTGCGCGGATCGGGCAAGGCCGATGGCGGGACCGATGTCGAGCCGGTGATCGAGAAGCAGAAG
CTCGGCGTGGTCGATCTCAACCAGGACGGCACCCACTACTTCGACCTGCACCACACTCCCGACGACACTCTCGACAAGGT
CGACCCGGCCGATCTGGCGCAAAACGTCGCCGCGTGGACCGAAGTTCTCAGGATCGTCGCGAACGAGCCGGGTCCCATCG
TCGCGGCCGACTGA

Upstream 100 bases:

>100_bases
GTCGGGTCCTTGGGTATAAGGCGAATAGAGTTGCGCCGCCTCTATCCGAGCGCAACCGTGCGGGCAAGCGGGGCTTGCGC
CGGAAGGGTGGCGGAGGGGC

Downstream 100 bases:

>100_bases
ACTTGCGCCCTTACGAAAAAAGGCTCCCCGTCGCGGGGGAGCCTTTTTCCGTTGCGTGGCGCCAAGGCCCGTTCAGATGC
GTTCGATGATGATCGCCGGT

Product: peptidase M28

Products: NA

Alternate protein names: Peptidase; Aminopeptidase; M28 Family Peptidase; M28D Family Peptidase; Peptidase Family; Endoribonuclease L-PSP; Peptidase Family M

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAEYWTQDRQGFMRNKFRAAALTAAIFVPLAAQAEEPKGDVAWDILAGLTSEVGPRMPGSEAEARARTWAQARLEALGFS
GVAIEPFTIRGYVRGRDEASLKAPIPFRLAVTALGYSGTTPDKGIEGDVVYFPTLDALKAAPAGSLAGKIAFIDHAMKRS
QDGSGYGPYGNVRRQGPAIAAAKGAMGVVIRSIGTDSHRNPHTGGTTFPDGVSPIPAGAVSNPDADLIARIAGGGKPMRL
AMTLTGRTTDNLPSGNVIGDLPGRDPSLPPILLGCHLDSWDLGTGAIDDAAGCAIITAAALNAQEGGRPLRTIRVLWAGS
EELGGFGGKAYAQRHAEPHALAMESDFGAARVWRVNFNLGSASKPLADRIAAALSPMGIVRGSGKADGGTDVEPVIEKQK
LGVVDLNQDGTHYFDLHHTPDDTLDKVDPADLAQNVAAWTEVLRIVANEPGPIVAAD

Sequences:

>Translated_457_residues
MAEYWTQDRQGFMRNKFRAAALTAAIFVPLAAQAEEPKGDVAWDILAGLTSEVGPRMPGSEAEARARTWAQARLEALGFS
GVAIEPFTIRGYVRGRDEASLKAPIPFRLAVTALGYSGTTPDKGIEGDVVYFPTLDALKAAPAGSLAGKIAFIDHAMKRS
QDGSGYGPYGNVRRQGPAIAAAKGAMGVVIRSIGTDSHRNPHTGGTTFPDGVSPIPAGAVSNPDADLIARIAGGGKPMRL
AMTLTGRTTDNLPSGNVIGDLPGRDPSLPPILLGCHLDSWDLGTGAIDDAAGCAIITAAALNAQEGGRPLRTIRVLWAGS
EELGGFGGKAYAQRHAEPHALAMESDFGAARVWRVNFNLGSASKPLADRIAAALSPMGIVRGSGKADGGTDVEPVIEKQK
LGVVDLNQDGTHYFDLHHTPDDTLDKVDPADLAQNVAAWTEVLRIVANEPGPIVAAD
>Mature_456_residues
AEYWTQDRQGFMRNKFRAAALTAAIFVPLAAQAEEPKGDVAWDILAGLTSEVGPRMPGSEAEARARTWAQARLEALGFSG
VAIEPFTIRGYVRGRDEASLKAPIPFRLAVTALGYSGTTPDKGIEGDVVYFPTLDALKAAPAGSLAGKIAFIDHAMKRSQ
DGSGYGPYGNVRRQGPAIAAAKGAMGVVIRSIGTDSHRNPHTGGTTFPDGVSPIPAGAVSNPDADLIARIAGGGKPMRLA
MTLTGRTTDNLPSGNVIGDLPGRDPSLPPILLGCHLDSWDLGTGAIDDAAGCAIITAAALNAQEGGRPLRTIRVLWAGSE
ELGGFGGKAYAQRHAEPHALAMESDFGAARVWRVNFNLGSASKPLADRIAAALSPMGIVRGSGKADGGTDVEPVIEKQKL
GVVDLNQDGTHYFDLHHTPDDTLDKVDPADLAQNVAAWTEVLRIVANEPGPIVAAD

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7706387, Length=395, Percent_Identity=30.6329113924051, Blast_Score=174, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47729; Mature: 47598

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYWTQDRQGFMRNKFRAAALTAAIFVPLAAQAEEPKGDVAWDILAGLTSEVGPRMPGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
EAEARARTWAQARLEALGFSGVAIEPFTIRGYVRGRDEASLKAPIPFRLAVTALGYSGTT
HHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCC
PDKGIEGDVVYFPTLDALKAAPAGSLAGKIAFIDHAMKRSQDGSGYGPYGNVRRQGPAIA
CCCCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AAKGAMGVVIRSIGTDSHRNPHTGGTTFPDGVSPIPAGAVSNPDADLIARIAGGGKPMRL
ECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
AMTLTGRTTDNLPSGNVIGDLPGRDPSLPPILLGCHLDSWDLGTGAIDDAAGCAIITAAA
EEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHEEHHHH
LNAQEGGRPLRTIRVLWAGSEELGGFGGKAYAQRHAEPHALAMESDFGAARVWRVNFNLG
HCHHHCCCCEEEEEEEEECCHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEEEEEEECCC
SASKPLADRIAAALSPMGIVRGSGKADGGTDVEPVIEKQKLGVVDLNQDGTHYFDLHHTP
CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCEEEEEECCC
DDTLDKVDPADLAQNVAAWTEVLRIVANEPGPIVAAD
CHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure 
AEYWTQDRQGFMRNKFRAAALTAAIFVPLAAQAEEPKGDVAWDILAGLTSEVGPRMPGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
EAEARARTWAQARLEALGFSGVAIEPFTIRGYVRGRDEASLKAPIPFRLAVTALGYSGTT
HHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCC
PDKGIEGDVVYFPTLDALKAAPAGSLAGKIAFIDHAMKRSQDGSGYGPYGNVRRQGPAIA
CCCCCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AAKGAMGVVIRSIGTDSHRNPHTGGTTFPDGVSPIPAGAVSNPDADLIARIAGGGKPMRL
ECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
AMTLTGRTTDNLPSGNVIGDLPGRDPSLPPILLGCHLDSWDLGTGAIDDAAGCAIITAAA
EEEEECCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHEEHHHH
LNAQEGGRPLRTIRVLWAGSEELGGFGGKAYAQRHAEPHALAMESDFGAARVWRVNFNLG
HCHHHCCCCEEEEEEEEECCHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEEEEEEECCC
SASKPLADRIAAALSPMGIVRGSGKADGGTDVEPVIEKQKLGVVDLNQDGTHYFDLHHTP
CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCEEEEEECCC
DDTLDKVDPADLAQNVAAWTEVLRIVANEPGPIVAAD
CHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA