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The map label for this gene is ydiI [C]

Identifier: 87200361

GI number: 87200361

Start: 2493513

End: 2493947

Strand: Reverse

Name: ydiI [C]

Synonym: Saro_2347

Alternate gene names: 87200361

Gene position: 2493947-2493513 (Counterclockwise)

Preceding gene: 87200362

Following gene: 87200360

Centisome position: 70.02

GC content: 64.14

Gene sequence:

>435_bases
ATGATCTGGTGGAACGGCGAGATGCCGTCAATGGATCGGCTGACCCGGCTCGGCAGTTCCTCGATGCCCGCGCACCTCGG
CATCGAGTTCGTCGATTGCGGCGAAGATTGGGTGCGCGGCCGGATGCCGGTCGATCATCGCACCCACCAGCCATTCGGCA
GGCTCCACGGTGGCGCTTCGGTCGCCCTTGCCGAAACCATCGGCTCGATGGCCGGGGCTATGGTCGTCGATCCCGATCGC
TTCGCCACGGTCGGCATGGAGATCAACGCCAACCACCTGCGCCCCGTCCGCGACGGCTGGGTCTATGCCACCGCACGGCC
CGATGCACTGGGCAGGACCACGCACGTCTGGTCCATCCGGATCGAGGATGAAGCCGGGAAACTCGTTTGCGTTTCAAGGC
TTACTTTGGCCGTCATTCCGCTCGAACGGAAATGA

Upstream 100 bases:

>100_bases
CCATCCATTCGACCCGCATGATGGTCGATGAAAGCGTGCTGCCGCTTGGCACTGCAGTCCTTGCGGGTTGCGCCGAACGC
TTCCTTGCCGAGGGTTTCGC

Downstream 100 bases:

>100_bases
AACGTATGTTTCTAATACGATTTTTCGGAACCAATCACTAGGAGGTGCATTCCAGCCGGCAGGTGCCGCTGACATGAACG
ACAAATCCTCCGACAACTTT

Product: phenylacetic acid degradation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIWWNGEMPSMDRLTRLGSSSMPAHLGIEFVDCGEDWVRGRMPVDHRTHQPFGRLHGGASVALAETIGSMAGAMVVDPDR
FATVGMEINANHLRPVRDGWVYATARPDALGRTTHVWSIRIEDEAGKLVCVSRLTLAVIPLERK

Sequences:

>Translated_144_residues
MIWWNGEMPSMDRLTRLGSSSMPAHLGIEFVDCGEDWVRGRMPVDHRTHQPFGRLHGGASVALAETIGSMAGAMVVDPDR
FATVGMEINANHLRPVRDGWVYATARPDALGRTTHVWSIRIEDEAGKLVCVSRLTLAVIPLERK
>Mature_144_residues
MIWWNGEMPSMDRLTRLGSSSMPAHLGIEFVDCGEDWVRGRMPVDHRTHQPFGRLHGGASVALAETIGSMAGAMVVDPDR
FATVGMEINANHLRPVRDGWVYATARPDALGRTTHVWSIRIEDEAGKLVCVSRLTLAVIPLERK

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=139, Percent_Identity=46.7625899280576, Blast_Score=123, Evalue=5e-30,
Organism=Escherichia coli, GI1786813, Length=139, Percent_Identity=48.2014388489209, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15946; Mature: 15946

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWWNGEMPSMDRLTRLGSSSMPAHLGIEFVDCGEDWVRGRMPVDHRTHQPFGRLHGGAS
CEEECCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCHHHCCCCE
VALAETIGSMAGAMVVDPDRFATVGMEINANHLRPVRDGWVYATARPDALGRTTHVWSIR
EHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEE
IEDEAGKLVCVSRLTLAVIPLERK
EECCCCCEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MIWWNGEMPSMDRLTRLGSSSMPAHLGIEFVDCGEDWVRGRMPVDHRTHQPFGRLHGGAS
CEEECCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCHHHCCCCE
VALAETIGSMAGAMVVDPDRFATVGMEINANHLRPVRDGWVYATARPDALGRTTHVWSIR
EHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEE
IEDEAGKLVCVSRLTLAVIPLERK
EECCCCCEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]