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The map label for this gene is 87200349

Identifier: 87200349

GI number: 87200349

Start: 2482011

End: 2483528

Strand: Reverse

Name: 87200349

Synonym: Saro_2335

Alternate gene names: NA

Gene position: 2483528-2482011 (Counterclockwise)

Preceding gene: 87200350

Following gene: 87200348

Centisome position: 69.73

GC content: 68.84

Gene sequence:

>1518_bases
ATGACCAGCATCTACGAGGAAGTGCGCATCGCGCTCCACGGCATATGGCACCGGCGCTGGATCGCGCTCGGCCTGGCCTG
GGGCGTGTGCCTGCTCGGTTGGCTGGCGGTGGCGATGGTGCCGAACAGCTATGAATCGAAGGCCCGCATCTTCGTCCAGA
TCGACGACGTGCTGGCCGATCAGATCGGCATCGGCGGCGACCGCAAGCGCGACATCGAGCGCGTGCGCCAGACGCTGACC
AGCGCGGTCAACCTGGAGAAGGTCATCCGTGCAACCCGGCTGGGCGACAAGGTGACCAGCGACAAGCAGATGCAGGCGGC
GGTCGAGAGCCTGGGCAAGCACGTGACCGTCGTCAGCCAGCAGGACAACCTGTTCGAGATCACCGGGACGGCCGGTGGCG
GCGGGCGCAACGATGCCGAGAACGCCCGGCTGGCGCAGGACATCGTCCAGAAGATGATCGACATCTTCCGCGAGGAAAAC
CTGGCCGGCGGGCGCGGCGAGATGACCGATACGCTGGCCTTCATGGACCAGCAGCTCACCGACCGGAAGAAGGCGCTGGA
AGAGGCCGAGCTCAAGCGCACCGAGTTCGAATCGAAGAACGCCGGCTTCATCCCCGGCGCGGGGTCGCTCACCACCCGGC
TCGAGGCGGCGCGCAACCAGATGCGCGACGTCGAATCGAACCTGCTGGCGGCGCAGAGCGCGCTCGCCTCGATCAGCGGC
CAGCTTTCGGGCACGCCGCAGACCATCGCCATTCCGGGCGTGTCGGGTGGCGCCAAGGGTGCCCTGGCGCAGGCGCAGGC
CGACCTTGGCGCGATGCGCGCGCGCGGGCTTACCGACAGCCATCCGGACGTGATTTCCGCCAAGGCCCAGATCGCCAACC
TGCAGAAGGCGGCGGCGGGCGAGGGTGCTGGCGGCGGTACGCCCAATCCGGCCTACAGCTCGCTGCTTTCGATCAAGGCC
GATCGCGAGGCGAGCGTGGTCTCGCTCCAGTCGCGCAAGGCCTCGCTCCAGGCCGAGATCGCCCAGCTCACCGCGCAGCA
GTACAGCGAACCGACCGTGGCCGCCGAAGCCGCGCGCATCAACCGCGACTACGACGTGCTCAAGGAGCAGTACGACAAGC
TCCTGCGCGACCGCGAGCAGCTGCGCCTGCGCGGCCAGGTCGAGACGGAGCGCGACGCGGTGAAGTTCGAGGTGATCGAC
CCGCCGACGATGCCGCGCGGGCCTGCGGCCCCCGACCGGCCGCTGCTGCTGTTCCTCGTGCTGATCGTCGGCGTGGGCGC
GGGTTGCGGCGGGGCATTTGCCTTCGGCCAGCTCAGGTCCGCCTATTCGACCACGGGGCAGCTCGAACGCGCGACCGGGC
TTCCGGTCCTCGGCGGAATTTCCGAGGCCATCACCCGCACCGCAAGGGCTGAGCGCGCACGCCGCCTCAAGTGGTTCGCG
GGTGGTGTGGCAGGCCTGTTCGTCGTCCTCTTCGTCCTCCTCGGCGTCGAGATGCTGAAGCGCGGCATGGTGGCCTGA

Upstream 100 bases:

>100_bases
CGCAAGGGCGATACCAAGGCGAATGTCCTGCTGATGCCGGGCGACGTCATCATCATCCCCGAGAGCACGTTCTGAGCAGC
GGGCGGGGGGCACGGTAGCC

Downstream 100 bases:

>100_bases
GGAGCGATGCGATGACCGACCAGAGCAAGATTCCCGTGCCGCCTTCCGGCCCTTCGCTGATCGAGCGTGCCTCGGGCAGC
TTCGATTTTCGCGCGCTGAT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Polysaccharide Chain Length Determinant Protein; Chain Length Determinant Protein; Chain Length Determinant Family Protein; Lipopolysaccharide Biosynthesis Protein; Exopolysaccharide Biosynthesis Protein; PEP-CTERM Locus Polysaccharide Chain Length Determinant

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MTSIYEEVRIALHGIWHRRWIALGLAWGVCLLGWLAVAMVPNSYESKARIFVQIDDVLADQIGIGGDRKRDIERVRQTLT
SAVNLEKVIRATRLGDKVTSDKQMQAAVESLGKHVTVVSQQDNLFEITGTAGGGGRNDAENARLAQDIVQKMIDIFREEN
LAGGRGEMTDTLAFMDQQLTDRKKALEEAELKRTEFESKNAGFIPGAGSLTTRLEAARNQMRDVESNLLAAQSALASISG
QLSGTPQTIAIPGVSGGAKGALAQAQADLGAMRARGLTDSHPDVISAKAQIANLQKAAAGEGAGGGTPNPAYSSLLSIKA
DREASVVSLQSRKASLQAEIAQLTAQQYSEPTVAAEAARINRDYDVLKEQYDKLLRDREQLRLRGQVETERDAVKFEVID
PPTMPRGPAAPDRPLLLFLVLIVGVGAGCGGAFAFGQLRSAYSTTGQLERATGLPVLGGISEAITRTARAERARRLKWFA
GGVAGLFVVLFVLLGVEMLKRGMVA

Sequences:

>Translated_505_residues
MTSIYEEVRIALHGIWHRRWIALGLAWGVCLLGWLAVAMVPNSYESKARIFVQIDDVLADQIGIGGDRKRDIERVRQTLT
SAVNLEKVIRATRLGDKVTSDKQMQAAVESLGKHVTVVSQQDNLFEITGTAGGGGRNDAENARLAQDIVQKMIDIFREEN
LAGGRGEMTDTLAFMDQQLTDRKKALEEAELKRTEFESKNAGFIPGAGSLTTRLEAARNQMRDVESNLLAAQSALASISG
QLSGTPQTIAIPGVSGGAKGALAQAQADLGAMRARGLTDSHPDVISAKAQIANLQKAAAGEGAGGGTPNPAYSSLLSIKA
DREASVVSLQSRKASLQAEIAQLTAQQYSEPTVAAEAARINRDYDVLKEQYDKLLRDREQLRLRGQVETERDAVKFEVID
PPTMPRGPAAPDRPLLLFLVLIVGVGAGCGGAFAFGQLRSAYSTTGQLERATGLPVLGGISEAITRTARAERARRLKWFA
GGVAGLFVVLFVLLGVEMLKRGMVA
>Mature_504_residues
TSIYEEVRIALHGIWHRRWIALGLAWGVCLLGWLAVAMVPNSYESKARIFVQIDDVLADQIGIGGDRKRDIERVRQTLTS
AVNLEKVIRATRLGDKVTSDKQMQAAVESLGKHVTVVSQQDNLFEITGTAGGGGRNDAENARLAQDIVQKMIDIFREENL
AGGRGEMTDTLAFMDQQLTDRKKALEEAELKRTEFESKNAGFIPGAGSLTTRLEAARNQMRDVESNLLAAQSALASISGQ
LSGTPQTIAIPGVSGGAKGALAQAQADLGAMRARGLTDSHPDVISAKAQIANLQKAAAGEGAGGGTPNPAYSSLLSIKAD
REASVVSLQSRKASLQAEIAQLTAQQYSEPTVAAEAARINRDYDVLKEQYDKLLRDREQLRLRGQVETERDAVKFEVIDP
PTMPRGPAAPDRPLLLFLVLIVGVGAGCGGAFAFGQLRSAYSTTGQLERATGLPVLGGISEAITRTARAERARRLKWFAG
GVAGLFVVLFVLLGVEMLKRGMVA

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54185; Mature: 54053

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIYEEVRIALHGIWHRRWIALGLAWGVCLLGWLAVAMVPNSYESKARIFVQIDDVLAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
QIGIGGDRKRDIERVRQTLTSAVNLEKVIRATRLGDKVTSDKQMQAAVESLGKHVTVVSQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEC
QDNLFEITGTAGGGGRNDAENARLAQDIVQKMIDIFREENLAGGRGEMTDTLAFMDQQLT
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
DRKKALEEAELKRTEFESKNAGFIPGAGSLTTRLEAARNQMRDVESNLLAAQSALASISG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLSGTPQTIAIPGVSGGAKGALAQAQADLGAMRARGLTDSHPDVISAKAQIANLQKAAAG
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
EGAGGGTPNPAYSSLLSIKADREASVVSLQSRKASLQAEIAQLTAQQYSEPTVAAEAARI
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NRDYDVLKEQYDKLLRDREQLRLRGQVETERDAVKFEVIDPPTMPRGPAAPDRPLLLFLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
LIVGVGAGCGGAFAFGQLRSAYSTTGQLERATGLPVLGGISEAITRTARAERARRLKWFA
HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GGVAGLFVVLFVLLGVEMLKRGMVA
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSIYEEVRIALHGIWHRRWIALGLAWGVCLLGWLAVAMVPNSYESKARIFVQIDDVLAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHH
QIGIGGDRKRDIERVRQTLTSAVNLEKVIRATRLGDKVTSDKQMQAAVESLGKHVTVVSQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEC
QDNLFEITGTAGGGGRNDAENARLAQDIVQKMIDIFREENLAGGRGEMTDTLAFMDQQLT
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
DRKKALEEAELKRTEFESKNAGFIPGAGSLTTRLEAARNQMRDVESNLLAAQSALASISG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QLSGTPQTIAIPGVSGGAKGALAQAQADLGAMRARGLTDSHPDVISAKAQIANLQKAAAG
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
EGAGGGTPNPAYSSLLSIKADREASVVSLQSRKASLQAEIAQLTAQQYSEPTVAAEAARI
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NRDYDVLKEQYDKLLRDREQLRLRGQVETERDAVKFEVIDPPTMPRGPAAPDRPLLLFLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
LIVGVGAGCGGAFAFGQLRSAYSTTGQLERATGLPVLGGISEAITRTARAERARRLKWFA
HHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GGVAGLFVVLFVLLGVEMLKRGMVA
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA