Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yveL [H]

Identifier: 87200348

GI number: 87200348

Start: 2481079

End: 2481999

Strand: Reverse

Name: yveL [H]

Synonym: Saro_2334

Alternate gene names: 87200348

Gene position: 2481999-2481079 (Counterclockwise)

Preceding gene: 87200349

Following gene: 87200347

Centisome position: 69.69

GC content: 69.27

Gene sequence:

>921_bases
ATGACCGACCAGAGCAAGATTCCCGTGCCGCCTTCCGGCCCTTCGCTGATCGAGCGTGCCTCGGGCAGCTTCGATTTTCG
CGCGCTGATCCGGCCGGTCGTGGCCGACCTCCCGCCTGCTCCCGCGCCAAGGATCGCTGCCGCGCCTTCGCCGGTGGCCG
GCTCCGAAGCGCTGCCGCAGGTCCGTCCTTTCGGCGGTCCGCGCCACCCCATCGACCGCGCGCACTTGCGCGAACAGTGC
CTGATCGAGCCCGAGAGCGCCGTCACCGGCCTCCTCGAGGAGTTCCGCATCGTGAAGCGCCAGCTCCTGCGCACCGCCGC
CGAGACGCGCGGCAAGGGTCACGGCGAGCGCATCCTCGTGGCCTCGGCGCATCCGGGCGAGGGCAAGACCTTCTGCGCGG
TCAACCTCGCACTGTCGATGGCGGCGGAGAAGGACACCGAAGTCCTGCTCGTCGATGCCGATTTCGCCAAGCCATCGGTG
CTCTCGACGCTGGGCCTGCCCGGCGGCCCGGGCCTCATGGATGCGCTGGCCGATCCGGGCATCGCGGTCGAGGACTGCGT
GATCGGCACCGACATCGCCGGGCTCTACGTGCTCCCGGCCGGCAACGTGACCGGATCGGACACCGAATACCTTGCCTCGT
CGCGGACGGAGGCGGTGCTGGCGCGGCTGACGGCCAATGCGCCCAACCGCATCGTCATCTTCGATTCGCCGCCCGTACTG
GCCGCATCGCCCGCGACCGTCCTTGCCAACCATGTCGGGCAGACGGTGATGGTCGTGCGTGCCGACGTGACCGGCGAGGC
CGCGCTGCGTGACGCGGTGGGCCTGCTTTCGGCCTGCGAGGATATCAAGCTCCTGCTCAACGGCACGCGCTTTTCCACCA
CTGGCCGCCGTTTCGGCACCTACTACGGATACACGGAATGA

Upstream 100 bases:

>100_bases
AGTGGTTCGCGGGTGGTGTGGCAGGCCTGTTCGTCGTCCTCTTCGTCCTCCTCGGCGTCGAGATGCTGAAGCGCGGCATG
GTGGCCTGAGGAGCGATGCG

Downstream 100 bases:

>100_bases
AGGTCGCCGCCCTCGCGCTGCGCATGGCGCTGCTGGCGGGTACCCTTGCCGCAGGTCCGCTCCATGCGCAGACGCTCTCC
TATGAAAGCGTCGATGGCGA

Product: putative exopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQC
LIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSV
LSTLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL
AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE

Sequences:

>Translated_306_residues
MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQC
LIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSV
LSTLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL
AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE
>Mature_305_residues
TDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQCL
IEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVL
STLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVLA
ASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE

Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 32002; Mature: 31871

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQ
CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
VRPFGGPRHPIDRAHLREQCLIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILV
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
ASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVLSTLGLPGGPGLMDALADPG
EECCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCC
IAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL
CCHHHEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGT
CCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCC
YYGYTE
CCCCCC
>Mature Secondary Structure 
TDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQ
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
VRPFGGPRHPIDRAHLREQCLIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILV
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
ASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVLSTLGLPGGPGLMDALADPG
EECCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCC
IAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL
CCHHHEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGT
CCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCC
YYGYTE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]