Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yveL [H]
Identifier: 87200348
GI number: 87200348
Start: 2481079
End: 2481999
Strand: Reverse
Name: yveL [H]
Synonym: Saro_2334
Alternate gene names: 87200348
Gene position: 2481999-2481079 (Counterclockwise)
Preceding gene: 87200349
Following gene: 87200347
Centisome position: 69.69
GC content: 69.27
Gene sequence:
>921_bases ATGACCGACCAGAGCAAGATTCCCGTGCCGCCTTCCGGCCCTTCGCTGATCGAGCGTGCCTCGGGCAGCTTCGATTTTCG CGCGCTGATCCGGCCGGTCGTGGCCGACCTCCCGCCTGCTCCCGCGCCAAGGATCGCTGCCGCGCCTTCGCCGGTGGCCG GCTCCGAAGCGCTGCCGCAGGTCCGTCCTTTCGGCGGTCCGCGCCACCCCATCGACCGCGCGCACTTGCGCGAACAGTGC CTGATCGAGCCCGAGAGCGCCGTCACCGGCCTCCTCGAGGAGTTCCGCATCGTGAAGCGCCAGCTCCTGCGCACCGCCGC CGAGACGCGCGGCAAGGGTCACGGCGAGCGCATCCTCGTGGCCTCGGCGCATCCGGGCGAGGGCAAGACCTTCTGCGCGG TCAACCTCGCACTGTCGATGGCGGCGGAGAAGGACACCGAAGTCCTGCTCGTCGATGCCGATTTCGCCAAGCCATCGGTG CTCTCGACGCTGGGCCTGCCCGGCGGCCCGGGCCTCATGGATGCGCTGGCCGATCCGGGCATCGCGGTCGAGGACTGCGT GATCGGCACCGACATCGCCGGGCTCTACGTGCTCCCGGCCGGCAACGTGACCGGATCGGACACCGAATACCTTGCCTCGT CGCGGACGGAGGCGGTGCTGGCGCGGCTGACGGCCAATGCGCCCAACCGCATCGTCATCTTCGATTCGCCGCCCGTACTG GCCGCATCGCCCGCGACCGTCCTTGCCAACCATGTCGGGCAGACGGTGATGGTCGTGCGTGCCGACGTGACCGGCGAGGC CGCGCTGCGTGACGCGGTGGGCCTGCTTTCGGCCTGCGAGGATATCAAGCTCCTGCTCAACGGCACGCGCTTTTCCACCA CTGGCCGCCGTTTCGGCACCTACTACGGATACACGGAATGA
Upstream 100 bases:
>100_bases AGTGGTTCGCGGGTGGTGTGGCAGGCCTGTTCGTCGTCCTCTTCGTCCTCCTCGGCGTCGAGATGCTGAAGCGCGGCATG GTGGCCTGAGGAGCGATGCG
Downstream 100 bases:
>100_bases AGGTCGCCGCCCTCGCGCTGCGCATGGCGCTGCTGGCGGGTACCCTTGCCGCAGGTCCGCTCCATGCGCAGACGCTCTCC TATGAAAGCGTCGATGGCGA
Product: putative exopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQC LIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSV LSTLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE
Sequences:
>Translated_306_residues MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQC LIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSV LSTLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE >Mature_305_residues TDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQVRPFGGPRHPIDRAHLREQCL IEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILVASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVL STLGLPGGPGLMDALADPGIAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVLA ASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGTYYGYTE
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 32002; Mature: 31871
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQ CCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VRPFGGPRHPIDRAHLREQCLIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILV CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVLSTLGLPGGPGLMDALADPG EECCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCC IAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL CCHHHEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGT CCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCC YYGYTE CCCCCC >Mature Secondary Structure TDQSKIPVPPSGPSLIERASGSFDFRALIRPVVADLPPAPAPRIAAAPSPVAGSEALPQ CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC VRPFGGPRHPIDRAHLREQCLIEPESAVTGLLEEFRIVKRQLLRTAAETRGKGHGERILV CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE ASAHPGEGKTFCAVNLALSMAAEKDTEVLLVDADFAKPSVLSTLGLPGGPGLMDALADPG EECCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHHCCCC IAVEDCVIGTDIAGLYVLPAGNVTGSDTEYLASSRTEAVLARLTANAPNRIVIFDSPPVL CCHHHEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC AASPATVLANHVGQTVMVVRADVTGEAALRDAVGLLSACEDIKLLLNGTRFSTTGRRFGT CCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHCC YYGYTE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]