Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199966
Identifier: 87199966
GI number: 87199966
Start: 2066623
End: 2067942
Strand: Reverse
Name: 87199966
Synonym: Saro_1949
Alternate gene names: NA
Gene position: 2067942-2066623 (Counterclockwise)
Preceding gene: 87199967
Following gene: 87199965
Centisome position: 58.06
GC content: 65.0
Gene sequence:
>1320_bases ATGCGAACGATGCTTGTCCTGATCCCGCTGCTGGCACCGACCATTGCGCGGGCCGCACCCGAAGATGCCGTTTCTCAGGC GCGGCTTCGTGCTGACGTGGAGAAGCTGGTCAGTTTCGGCACGCGGCATACCCTGTCCTCGCAATCCGATCCGAGGCGCG GAATCGGGGCTGCTCGAAAATGGGCTGAAGCCGAATTTCGCAAGGCATCGGCCGCCTGCGGCAGTTGCTTCGAGATCGTG TTGCCTGAAACCGTGGTGAGTGGCGACCGAGTGCCGGTGCCGACGCGGTTGGTCGATGTGGTGGCGATCCAGCGCGGGAC CGAGCGGCCCAACGAGGTTGTGATTGTCCAGGGTCACATCGACAGCCGCGTTTCCGATGTTCTCGATGCGGTTAAGGACG CGCCGGGCGCGAACGACGACGCTTCAGGCACCGCGCTGGTGCTGGAAGCGGCACGGGTGCTCTCGAAGGAGCGCTTTCCG ACCACCGTCGTCTATGCAGTACTTTCGGGCGAGGAACAGGGGCTGCTCGGCGGCAAGCTGCTGGCTGATTATGGTGCGCG GCAGGGATGGACCGTGAAAGCCGTCCTCAACAACGATATCGTCGGTGGATCGACCGGATCGGACGGGTACCGGGACGATA CGCATGTGCGGGTGCTATCCGAAGGGCCGCGTGCCGACGCTACCGATGCCCTGCGCGCGCAGATGCGGCGTTATGGCGGC GAGAACGACAGCCCTTCGCGCAACATCTCGCGCTGGCTGGCAGGGCTAGCCGAGGCGGACGCGAAGGGCTTGGCGGTGCG GCAGGTCTGGCGCGCGGACCGGCTTGGCCGGGGCGGGGACCAACTGCCGTTTTCTGACAGGGGCTTTCCCGCCGTGCGTT TTACCGTCGCCGTGGAGGATTACGAGCACCAACATCAGGACTTGCGCACCGAAGGCGGAGTGAAGTTCGGCGATACCATG GACGAGATGGATTTTCCCTATCTGGCGAAAGTGACGAGGCTCAACGTACGGGCGCTGGCGAGGCTGGCACGGACGCCTAT GCCCCCGGCTCCGGTGGTCAAAGGTGCAGTGCAGCCAAGTACCGACGTGGAGTGGCAGGCGGTGCCCGGCGCGTTTCGCT ATGTGCTGTGGCAACGGAGGACCGATGCGCCGATGTGGGAGACCCGCTTGCTGGAAACGGGTGACCTGAAAGCCAGTCTC AAGGGCGTGCGCGCTGACGACTGGCTGTTTGGCGTGAGCGCCATGGCGGCGGACGGTAGCGAAAGTCCGATTGCCTCGGC GGTGCCTGGCGGGCAGTTCGCCCCGCTGGCGAAACCGTAA
Upstream 100 bases:
>100_bases TCGCGCGGTCCTACTGATTTCCTTGAGGGTGGCGTGCTATCGCCACCCTTTTGGGCCCAGCGTCTTGGCGTGGCGTAGAC GTGCGATATTGTCGCGCGCC
Downstream 100 bases:
>100_bases CCGCTTGCCATCCGGGGGCGCAGGGACCACATGCCCCTCAATGGCTAAGCACAAATTTCCCCAGGGTCTTCCCACGCGCC AACAGGTGCTGGATTTCATC
Product: peptidase M28
Products: NA
Alternate protein names: Peptidase; Leucine Aminopeptidase-Related Protein; Aminopeptidase Fused Fibronectin Type 3 Domain; Aminopeptidase; Fibronectin Type III Domain Protein; Leucine Aminopeptidase-Like Protein; Peptidase Family M
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MRTMLVLIPLLAPTIARAAPEDAVSQARLRADVEKLVSFGTRHTLSSQSDPRRGIGAARKWAEAEFRKASAACGSCFEIV LPETVVSGDRVPVPTRLVDVVAIQRGTERPNEVVIVQGHIDSRVSDVLDAVKDAPGANDDASGTALVLEAARVLSKERFP TTVVYAVLSGEEQGLLGGKLLADYGARQGWTVKAVLNNDIVGGSTGSDGYRDDTHVRVLSEGPRADATDALRAQMRRYGG ENDSPSRNISRWLAGLAEADAKGLAVRQVWRADRLGRGGDQLPFSDRGFPAVRFTVAVEDYEHQHQDLRTEGGVKFGDTM DEMDFPYLAKVTRLNVRALARLARTPMPPAPVVKGAVQPSTDVEWQAVPGAFRYVLWQRRTDAPMWETRLLETGDLKASL KGVRADDWLFGVSAMAADGSESPIASAVPGGQFAPLAKP
Sequences:
>Translated_439_residues MRTMLVLIPLLAPTIARAAPEDAVSQARLRADVEKLVSFGTRHTLSSQSDPRRGIGAARKWAEAEFRKASAACGSCFEIV LPETVVSGDRVPVPTRLVDVVAIQRGTERPNEVVIVQGHIDSRVSDVLDAVKDAPGANDDASGTALVLEAARVLSKERFP TTVVYAVLSGEEQGLLGGKLLADYGARQGWTVKAVLNNDIVGGSTGSDGYRDDTHVRVLSEGPRADATDALRAQMRRYGG ENDSPSRNISRWLAGLAEADAKGLAVRQVWRADRLGRGGDQLPFSDRGFPAVRFTVAVEDYEHQHQDLRTEGGVKFGDTM DEMDFPYLAKVTRLNVRALARLARTPMPPAPVVKGAVQPSTDVEWQAVPGAFRYVLWQRRTDAPMWETRLLETGDLKASL KGVRADDWLFGVSAMAADGSESPIASAVPGGQFAPLAKP >Mature_439_residues MRTMLVLIPLLAPTIARAAPEDAVSQARLRADVEKLVSFGTRHTLSSQSDPRRGIGAARKWAEAEFRKASAACGSCFEIV LPETVVSGDRVPVPTRLVDVVAIQRGTERPNEVVIVQGHIDSRVSDVLDAVKDAPGANDDASGTALVLEAARVLSKERFP TTVVYAVLSGEEQGLLGGKLLADYGARQGWTVKAVLNNDIVGGSTGSDGYRDDTHVRVLSEGPRADATDALRAQMRRYGG ENDSPSRNISRWLAGLAEADAKGLAVRQVWRADRLGRGGDQLPFSDRGFPAVRFTVAVEDYEHQHQDLRTEGGVKFGDTM DEMDFPYLAKVTRLNVRALARLARTPMPPAPVVKGAVQPSTDVEWQAVPGAFRYVLWQRRTDAPMWETRLLETGDLKASL KGVRADDWLFGVSAMAADGSESPIASAVPGGQFAPLAKP
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47372; Mature: 47372
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTMLVLIPLLAPTIARAAPEDAVSQARLRADVEKLVSFGTRHTLSSQSDPRRGIGAARK CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHH WAEAEFRKASAACGSCFEIVLPETVVSGDRVPVPTRLVDVVAIQRGTERPNEVVIVQGHI HHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC DSRVSDVLDAVKDAPGANDDASGTALVLEAARVLSKERFPTTVVYAVLSGEEQGLLGGKL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LADYGARQGWTVKAVLNNDIVGGSTGSDGYRDDTHVRVLSEGPRADATDALRAQMRRYGG HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC ENDSPSRNISRWLAGLAEADAKGLAVRQVWRADRLGRGGDQLPFSDRGFPAVRFTVAVED CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC YEHQHQDLRTEGGVKFGDTMDEMDFPYLAKVTRLNVRALARLARTPMPPAPVVKGAVQPS HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC TDVEWQAVPGAFRYVLWQRRTDAPMWETRLLETGDLKASLKGVRADDWLFGVSAMAADGS CCCCEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCC ESPIASAVPGGQFAPLAKP CCCCHHCCCCCCCCCCCCC >Mature Secondary Structure MRTMLVLIPLLAPTIARAAPEDAVSQARLRADVEKLVSFGTRHTLSSQSDPRRGIGAARK CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHH WAEAEFRKASAACGSCFEIVLPETVVSGDRVPVPTRLVDVVAIQRGTERPNEVVIVQGHI HHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCC DSRVSDVLDAVKDAPGANDDASGTALVLEAARVLSKERFPTTVVYAVLSGEEQGLLGGKL HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH LADYGARQGWTVKAVLNNDIVGGSTGSDGYRDDTHVRVLSEGPRADATDALRAQMRRYGG HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC ENDSPSRNISRWLAGLAEADAKGLAVRQVWRADRLGRGGDQLPFSDRGFPAVRFTVAVED CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECC YEHQHQDLRTEGGVKFGDTMDEMDFPYLAKVTRLNVRALARLARTPMPPAPVVKGAVQPS HHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC TDVEWQAVPGAFRYVLWQRRTDAPMWETRLLETGDLKASLKGVRADDWLFGVSAMAADGS CCCCEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCC ESPIASAVPGGQFAPLAKP CCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA