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The map label for this gene is nodT [H]

Identifier: 87199730

GI number: 87199730

Start: 1800022

End: 1801488

Strand: Reverse

Name: nodT [H]

Synonym: Saro_1713

Alternate gene names: 87199730

Gene position: 1801488-1800022 (Counterclockwise)

Preceding gene: 87199731

Following gene: 87199729

Centisome position: 50.58

GC content: 71.57

Gene sequence:

>1467_bases
ATGACTGCCCTCCTCCCCCATCGCCGCCCGCTCCGCAGCATGGCCGGCGCCTTGGTCGTGGCCGCGCTTCTCGCCGGCTG
CACCACGGTGGGCCCGAACTACGCCGGAGCCCCCGACGCCGCACCCCAGGCCGTTTCCCGTGGCACGTTTGCCCGGGCAG
GCGCCGATGCCCTCGCCGCCGCGCCCGCGGCCCGGTGGTGGGAAAGCCTTGGCGATCCGGTTCTGAACCAGCTCGTCGAA
CAGGCGCTTGCCGACGCGCCCGGCATCGCCGCCGCAAACGCCCGCGTCGCCCAGTCGCGTGCGGCGCTTGCGGCCAATCG
CACCGCCGTGCTGCCTCAGCTCAACACGTCGTTCGCCGCGCCCTACATCAACGTCCCGGGCGGCCTGCTGAGCCCCAATG
GCGAAAGCGGCGGGCGCGACGAGATCAACGCCTACAACCTCGGCTTCGACGCCGCCTGGGAGATCGACCTGTTCGGCGGC
ACCCGCCGCAAGATCGAGGCCGCCTCGGCCCGCGCCGAAGCCGCCGAGGCGAGCGCTGCAGACGCGCGCGTCACGCTTTC
GGCAGAGATCGCGCGCGCCTATGTCGGGCTGCGCGCCAGACAGGCCATGGTGGGCTTGCAGGAGCGGCAGGTGGAAATCG
ACCGCGAGCTGGCCTCCCTCGCCCGCCAGCGCTTCGAGGCCGGTCGCATCCCGCAGCAGCCGGTCAACGGCGCCGAGGCG
CAGGCCTTTTCCAGCGAAGCCGACCTTGCGAAGAGCCGCGCCGAAATCGCGGTCCTGATGGACCAGATCGCGGTCCTCAC
CGGCAAGGAGCCCGGCACGCTCGACGCGCTGCTCGTCGCGCCCGCGCCAGTCCCGCTGCCCCCAGCGCAGGTCGCGGTCG
GCGACCCCGCGCTGCTCCTGCGCAGCCGCCCCGACATCCGCGCCGCCGAGCGCCAGCTTGCCGCCGCCAATGCCGACGTC
GGCTCGCGAATCGCGGACAAGTTCCCCAAGATCTCGTTCCTTGGCCTGCTTGGCCTTGGCGGGCAGGATTTCGGCGACGT
GTTCGATCCGGGCAACATCGTCGGCATCGCCCTGCCGCAAATAAAGTGGTCGCTGTTCGACGGTGGCCGCGCCGAACGTC
AGGTCGAGGCCGCGCGCGGCGCCTTTGCCGAGGCCGAGGCGAACTATCGCCGCACGGTCCTTTCAGCACTCCAGGACGCG
GAAGGATCGCTCGCCCGCTTTGGCGCGCAGCGGGTGGCCTTCGGCAAGGCGCTCGACGCGGAGACCCGCGCGCGCCGTAA
CGTCGAACTGCAACAGCAACGACTGGCAGCAGGCACGATCGGCAAGCCGGACAGGCTGGATGCGGAGCGCCAGGCCCTGC
AACTGGCGATGGCCGCCACCTCTGCCCGGGCCGAACTGACGACCGGTTTCGTCGCTGTCGAAAAGGCGCTCGGCCTCGGC
TGGACAGCCCCGGAGCCCGCGAAATGA

Upstream 100 bases:

>100_bases
ACGACTTCATGGCGCTGACCATCGGGATACTTCTCGTCGCGCCGCTTGTCCTGCTCCTGCGCCCGCTTCCCAAGGGCTAC
CACGCAAAGGCTGCTCACTG

Downstream 100 bases:

>100_bases
GCCGGTTTCGTCCATTTTATAGCATATTGACTCTGCACACGGCTGAGGCACTCTCGACCCACAAAACGCCACAAAGGCGA
GAAGGTGGGAAGGATGAGCT

Product: RND efflux system outer membrane lipoprotein NodT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTALLPHRRPLRSMAGALVVAALLAGCTTVGPNYAGAPDAAPQAVSRGTFARAGADALAAAPAARWWESLGDPVLNQLVE
QALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAAPYINVPGGLLSPNGESGGRDEINAYNLGFDAAWEIDLFGG
TRRKIEAASARAEAAEASAADARVTLSAEIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEA
QAFSSEADLAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVPLPPAQVAVGDPALLLRSRPDIRAAERQLAAANADV
GSRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQIKWSLFDGGRAERQVEAARGAFAEAEANYRRTVLSALQDA
EGSLARFGAQRVAFGKALDAETRARRNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLG
WTAPEPAK

Sequences:

>Translated_488_residues
MTALLPHRRPLRSMAGALVVAALLAGCTTVGPNYAGAPDAAPQAVSRGTFARAGADALAAAPAARWWESLGDPVLNQLVE
QALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAAPYINVPGGLLSPNGESGGRDEINAYNLGFDAAWEIDLFGG
TRRKIEAASARAEAAEASAADARVTLSAEIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEA
QAFSSEADLAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVPLPPAQVAVGDPALLLRSRPDIRAAERQLAAANADV
GSRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQIKWSLFDGGRAERQVEAARGAFAEAEANYRRTVLSALQDA
EGSLARFGAQRVAFGKALDAETRARRNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLG
WTAPEPAK
>Mature_487_residues
TALLPHRRPLRSMAGALVVAALLAGCTTVGPNYAGAPDAAPQAVSRGTFARAGADALAAAPAARWWESLGDPVLNQLVEQ
ALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAAPYINVPGGLLSPNGESGGRDEINAYNLGFDAAWEIDLFGGT
RRKIEAASARAEAAEASAADARVTLSAEIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEAQ
AFSSEADLAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVPLPPAQVAVGDPALLLRSRPDIRAAERQLAAANADVG
SRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQIKWSLFDGGRAERQVEAARGAFAEAEANYRRTVLSALQDAE
GSLARFGAQRVAFGKALDAETRARRNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLGW
TAPEPAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI2367348, Length=397, Percent_Identity=26.1964735516373, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1786785, Length=438, Percent_Identity=22.8310502283105, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50898; Mature: 50767

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLPHRRPLRSMAGALVVAALLAGCTTVGPNYAGAPDAAPQAVSRGTFARAGADALAA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHH
APAARWWESLGDPVLNQLVEQALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAA
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCC
PYINVPGGLLSPNGESGGRDEINAYNLGFDAAWEIDLFGGTRRKIEAASARAEAAEASAA
CEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
DARVTLSAEIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEA
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QAFSSEADLAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVPLPPAQVAVGDPALLL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCHHHH
RSRPDIRAAERQLAAANADVGSRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQ
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEHEECCCCCCCCCCCCCCCEEEEEECC
IKWSLFDGGRAERQVEAARGAFAEAEANYRRTVLSALQDAEGSLARFGAQRVAFGKALDA
EEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCH
ETRARRNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLG
HHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WTAPEPAK
CCCCCCCC
>Mature Secondary Structure 
TALLPHRRPLRSMAGALVVAALLAGCTTVGPNYAGAPDAAPQAVSRGTFARAGADALAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHH
APAARWWESLGDPVLNQLVEQALADAPGIAAANARVAQSRAALAANRTAVLPQLNTSFAA
CHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCC
PYINVPGGLLSPNGESGGRDEINAYNLGFDAAWEIDLFGGTRRKIEAASARAEAAEASAA
CEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
DARVTLSAEIARAYVGLRARQAMVGLQERQVEIDRELASLARQRFEAGRIPQQPVNGAEA
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
QAFSSEADLAKSRAEIAVLMDQIAVLTGKEPGTLDALLVAPAPVPLPPAQVAVGDPALLL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCHHHH
RSRPDIRAAERQLAAANADVGSRIADKFPKISFLGLLGLGGQDFGDVFDPGNIVGIALPQ
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEEHEECCCCCCCCCCCCCCCEEEEEECC
IKWSLFDGGRAERQVEAARGAFAEAEANYRRTVLSALQDAEGSLARFGAQRVAFGKALDA
EEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCH
ETRARRNVELQQQRLAAGTIGKPDRLDAERQALQLAMAATSARAELTTGFVAVEKALGLG
HHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WTAPEPAK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2338917; 2622339 [H]