Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199714
Identifier: 87199714
GI number: 87199714
Start: 1783416
End: 1783826
Strand: Reverse
Name: 87199714
Synonym: Saro_1697
Alternate gene names: NA
Gene position: 1783826-1783416 (Counterclockwise)
Preceding gene: 87199715
Following gene: 87199713
Centisome position: 50.09
GC content: 63.75
Gene sequence:
>411_bases ATGGAACAGTTCTTCACCGCCGTGGCCAACAAGGTTTCCGGCATGGCGGGGCGGCCCGCGACGTTCATCTTCGCACTCGC CATCATCATCGGCTGGGCGCTGAGTGGCCCCCTGTTCCTGTGGAGCGACACCTGGCAGCTCGTGGTCAACACGGGCACGA CCATCATAACCTTCCTGATGGTCTTCCTGATCCAGAACAGCCAGAATCGCGACGCCGCGGCAATGCAGGCCAAGCTGGAC GAACTGATCCGCGCGGTGGACAAGGCGCGCGAGGGCTTCGTCGGGATCGAGCACCTGACCGACGACGAGATCTGCCGCCT GCGCTCGGCGCTGGAACGGGAAGTCGGGATCGCGACCGACAAGCAGTCGACGACTGACGATTCGGTCGAGCGTCTGCTAG ACCGCACCTGA
Upstream 100 bases:
>100_bases GGTCGATGGAAAAGTCCATGACCGAGAAGGAACTGGAGGAACTTGCCTCGACGAGCCGCAAGGGGAAGCCCGAACACAAG CGCAAGGACTGAAGCGGCCC
Downstream 100 bases:
>100_bases CACTGGCGCGGAGAGCATCGAGAATGCACCGGATCGAAACCGACAGCCTGGGCGAAGTGCGCGTGCCCGCAGATGCCTAT TGGGGCGCCCAGACGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MEQFFTAVANKVSGMAGRPATFIFALAIIIGWALSGPLFLWSDTWQLVVNTGTTIITFLMVFLIQNSQNRDAAAMQAKLD ELIRAVDKAREGFVGIEHLTDDEICRLRSALEREVGIATDKQSTTDDSVERLLDRT
Sequences:
>Translated_136_residues MEQFFTAVANKVSGMAGRPATFIFALAIIIGWALSGPLFLWSDTWQLVVNTGTTIITFLMVFLIQNSQNRDAAAMQAKLD ELIRAVDKAREGFVGIEHLTDDEICRLRSALEREVGIATDKQSTTDDSVERLLDRT >Mature_136_residues MEQFFTAVANKVSGMAGRPATFIFALAIIIGWALSGPLFLWSDTWQLVVNTGTTIITFLMVFLIQNSQNRDAAAMQAKLD ELIRAVDKAREGFVGIEHLTDDEICRLRSALEREVGIATDKQSTTDDSVERLLDRT
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15108; Mature: 15108
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFFTAVANKVSGMAGRPATFIFALAIIIGWALSGPLFLWSDTWQLVVNTGTTIITFLM CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHEEECCCHHHHHHHH VFLIQNSQNRDAAAMQAKLDELIRAVDKAREGFVGIEHLTDDEICRLRSALEREVGIATD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCC KQSTTDDSVERLLDRT CCCCCHHHHHHHHCCC >Mature Secondary Structure MEQFFTAVANKVSGMAGRPATFIFALAIIIGWALSGPLFLWSDTWQLVVNTGTTIITFLM CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHEEECCCHHHHHHHH VFLIQNSQNRDAAAMQAKLDELIRAVDKAREGFVGIEHLTDDEICRLRSALEREVGIATD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCC KQSTTDDSVERLLDRT CCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA