Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yaiM [C]
Identifier: 87199661
GI number: 87199661
Start: 1719815
End: 1720801
Strand: Reverse
Name: yaiM [C]
Synonym: Saro_1644
Alternate gene names: 87199661
Gene position: 1720801-1719815 (Counterclockwise)
Preceding gene: 87199662
Following gene: 87199660
Centisome position: 48.32
GC content: 60.59
Gene sequence:
>987_bases ATGCGCCTGAAAACGATCCTTGCCTGCGCTGCCACGCTTTGCCTTGCCCAACCCGCACTTGCGCGGGTGGAGAAGGCGAC CGTTCACAGCGCAGCGGTAGAGGGCAATCTTGAAGGCAACTCGGCTGACCGTACCGTCTACGTTGTCCTCCCGGACACCT ACGACAAGGCCAAGGGCAAGCGCTATCCGGTCGTCTATTTCCTGCACGGCTTCAACTCGACAGCCAGCAAGTACGTCGAA GGAACGGATTATGAGGCTGCATTGAGAACAGCCCGAGCCGAAGTGATCCTCGTCTTTCCGGACAGCATGACGAAATGGGG CGGCTCGATGTATTCGAACTCGCCAACCGTCGGAAATTTTGAGGATTTCATTGCCAACGAGCTGATTGCCTGGACGGACA AGAATTTCCGCACGATCCCCAGGCGCGAGGCGCGCGGCCTCGCCGGACATTCGATGGGAGGTTATGGCACGCTCAAGCTC GGCATGAAGCGCCCGGACGTGTTCAGCGCGCTCTATGCGATGAACCCGTGCTGCCAGATTCCGCGCCCTGCCTCGTCAGC CGATGCGAAGTACGAAGCCTGGACGGTCGATCAGGCACTGGCGGCTGACTGGATGAGCCGGGGCAACTTCGCAGTGGCAG CGGCATGGTCGCCCAACCCCTCCAAGCCGCCATTCTACGCCGACCTTGGCACCAGTGACGGCAAGGTCAACGATCTCGTC ATTGCCAAGTGGGCGGCGAACTCCCCCGTGGCGATGGCATCACAATATCTGCCCGCGCTGCGGCGGATGAGCGGCATCGC CATCGATACCGGCGATACCGACTTCGTGCGGGCGGACGATGAACTGATTCACGAAACACTGACCCGGTTCGGCATCGCGC ACGACTGGGAGATCTATGTGGGCGACCACGGCAACCGCGTGAAGGAGCGCTTTGTCACCAAAGTTCTTCCCTTCTTCACC CGTCACCTGAAAGGCAGCACGCGTTGA
Upstream 100 bases:
>100_bases CCAAACTGCTCGACATCGGCGCCGGAACCAATGAAATCCGCAGGATGCTGATCGGCAGGGAGCTGATCGGCGCACGATAA CGGACCTTGCGGAGAGAACG
Downstream 100 bases:
>100_bases GCGCACCGGTCCTCTCGAGCAACGTCGACCTCAATTCCGAGCAGGCGCAGGCCCGCGCGGCGCATAACCGCGCGCTGGCG GGGGAACTGCGCGAAAGAGT
Product: putative esterase
Products: NA
Alternate protein names: Esterase Superfamily; Acetyl Esterase; Enterochelin Esterase; Enterochelin Esterase And ; Methionine Sulfoxide Reductase B; Esterase Family Protein; Endo-1 4-Beta-Xylanase Z; Peptide-Methionine-S-Oxide Reductase; Esterase-Like Protein; Lipoprotein; Enterochelin Esterase-Like Protein
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MRLKTILACAATLCLAQPALARVEKATVHSAAVEGNLEGNSADRTVYVVLPDTYDKAKGKRYPVVYFLHGFNSTASKYVE GTDYEAALRTARAEVILVFPDSMTKWGGSMYSNSPTVGNFEDFIANELIAWTDKNFRTIPRREARGLAGHSMGGYGTLKL GMKRPDVFSALYAMNPCCQIPRPASSADAKYEAWTVDQALAADWMSRGNFAVAAAWSPNPSKPPFYADLGTSDGKVNDLV IAKWAANSPVAMASQYLPALRRMSGIAIDTGDTDFVRADDELIHETLTRFGIAHDWEIYVGDHGNRVKERFVTKVLPFFT RHLKGSTR
Sequences:
>Translated_328_residues MRLKTILACAATLCLAQPALARVEKATVHSAAVEGNLEGNSADRTVYVVLPDTYDKAKGKRYPVVYFLHGFNSTASKYVE GTDYEAALRTARAEVILVFPDSMTKWGGSMYSNSPTVGNFEDFIANELIAWTDKNFRTIPRREARGLAGHSMGGYGTLKL GMKRPDVFSALYAMNPCCQIPRPASSADAKYEAWTVDQALAADWMSRGNFAVAAAWSPNPSKPPFYADLGTSDGKVNDLV IAKWAANSPVAMASQYLPALRRMSGIAIDTGDTDFVRADDELIHETLTRFGIAHDWEIYVGDHGNRVKERFVTKVLPFFT RHLKGSTR >Mature_328_residues MRLKTILACAATLCLAQPALARVEKATVHSAAVEGNLEGNSADRTVYVVLPDTYDKAKGKRYPVVYFLHGFNSTASKYVE GTDYEAALRTARAEVILVFPDSMTKWGGSMYSNSPTVGNFEDFIANELIAWTDKNFRTIPRREARGLAGHSMGGYGTLKL GMKRPDVFSALYAMNPCCQIPRPASSADAKYEAWTVDQALAADWMSRGNFAVAAAWSPNPSKPPFYADLGTSDGKVNDLV IAKWAANSPVAMASQYLPALRRMSGIAIDTGDTDFVRADDELIHETLTRFGIAHDWEIYVGDHGNRVKERFVTKVLPFFT RHLKGSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36075; Mature: 36075
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKTILACAATLCLAQPALARVEKATVHSAAVEGNLEGNSADRTVYVVLPDTYDKAKGK CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCHHHCCCC RYPVVYFLHGFNSTASKYVEGTDYEAALRTARAEVILVFPDSMTKWGGSMYSNSPTVGNF CCCEEEEEECCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCCCH EDFIANELIAWTDKNFRTIPRREARGLAGHSMGGYGTLKLGMKRPDVFSALYAMNPCCQI HHHHHHHHEEECCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC PRPASSADAKYEAWTVDQALAADWMSRGNFAVAAAWSPNPSKPPFYADLGTSDGKVNDLV CCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEE IAKWAANSPVAMASQYLPALRRMSGIAIDTGDTDFVRADDELIHETLTRFGIAHDWEIYV EEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEECCHHHHHHHHHHHCCCCCEEEEE GDHGNRVKERFVTKVLPFFTRHLKGSTR CCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLKTILACAATLCLAQPALARVEKATVHSAAVEGNLEGNSADRTVYVVLPDTYDKAKGK CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCHHHCCCC RYPVVYFLHGFNSTASKYVEGTDYEAALRTARAEVILVFPDSMTKWGGSMYSNSPTVGNF CCCEEEEEECCCCHHHHHCCCCCHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCCCH EDFIANELIAWTDKNFRTIPRREARGLAGHSMGGYGTLKLGMKRPDVFSALYAMNPCCQI HHHHHHHHEEECCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCC PRPASSADAKYEAWTVDQALAADWMSRGNFAVAAAWSPNPSKPPFYADLGTSDGKVNDLV CCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCEEE IAKWAANSPVAMASQYLPALRRMSGIAIDTGDTDFVRADDELIHETLTRFGIAHDWEIYV EEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEECCHHHHHHHHHHHCCCCCEEEEE GDHGNRVKERFVTKVLPFFTRHLKGSTR CCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA