Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is proB
Identifier: 87199168
GI number: 87199168
Start: 1194468
End: 1195601
Strand: Direct
Name: proB
Synonym: Saro_1146
Alternate gene names: 87199168
Gene position: 1194468-1195601 (Clockwise)
Preceding gene: 161760696
Following gene: 87199169
Centisome position: 33.54
GC content: 69.4
Gene sequence:
>1134_bases ATGAAGATCAGCCAGCTTGCCCAACTGACCCAGGCTTCCACCTGTCCGCGCCTCGTGGTCAAGGTCGGGTCGGCCCTGCT TGTCGGCAAGGATGGCGAGCCGCGCCGCGAATGGCTTTCTGCCCTGGTGTCCGAGATCGCCGCCATGCGCGCGGCCGGAC AGGAAGTCATCGTCGTCTCCTCCGGCGCGATCGCGCTCGGTGCGCGCAAGCTCGGGCTTGCCAAGGGCGGGCGGGGCAGC CTCTCCGACGCCCAGGCCGCCGCCTCGGTGGGCCAGATCGCGCTCGCGGGGCTCTGGGCCGAACTTCTGGCGCAGCACGG GCTCACCGCCGCGCAGATCCTGCTGACGCTCGAAGATCTCGAGGATCGCCGACGTTACCTCAATGTCACCGCCACGCTGG GCACGCTGCTCGCGGCATGCGCGGTGCCGGTGATCAACGAGAACGATTCCGTCGCAACCCAGGAAATCCGTTTCGGAGAC AACGACCGCCTTGCCGCCCGTGTGGGCCAGGCCGCAGGCGCATCGGGTGTGCTGCTCCTGTCCGACATCGACGGTCTCTA CGATCGCGACCCCCGCCAGCCCGGCGCCACCCGCATTCCCGTGGTCAAGGGCGTGACCCCTGAAATCCACGCCATGGCCA CTGGCGGTTCGTCTTCCGGACTCGGCTCGGGCGGCATGACGTCCAAGCTCCAGGCCGCCGAAATTGCCGAGCTTGCCGGA ATGGCGCTTGCCATCATCGACGGACAGCCCGTTGCCCCGATCGCCGCTGCCATGGGCGCTGCGCGCGGCACCCTGTTCCT GCCACGCGGACGCAAGCAGGCGCGCAAGGCCTGGCTCGGCGGGCGAATGCGGATGCGCGGCAGCGTGCAGGTCGACGCCG GTGCCGCCGCCGCGCTGGCCCGTGGCTCCAGCCTGCTTGCCGCCGGAGTGACAGAGGTCGACGGCGATTTCCAGCGCGGC GATGCCATTGCCGTGCTCGGTCCCGACGGCCGGACGCTGGCGCGCGGCCTTTCGGAATACGACGCTGCCGAGTGCGCGCG CCTCAAGGGGCGCCACAGCCGCGAGCATGAAGAACTTCTGGGCTATGCGCCGCGCTCGGCATTGATCCATCGCGACCAGA TGGTGCTGCTGTAA
Upstream 100 bases:
>100_bases GAGGGACGCGGCGGCCACGCTTGGCGTCATAGACACGACGCCCTGCATATCCGACCGGTAACCCTTCACGCACCGCCACA TTTGGCCTAAGCGGCTCCCC
Downstream 100 bases:
>100_bases TGGCGGCAGAATTGCTGGCGATCACCGGTGCCACCGGGTTCGTCGGGCAGGCGGTTCTCGATTTCGCCGCCCGCGCAGGG ATAGAAGTCCGTGCGCTTGC
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKISQLAQLTQASTCPRLVVKVGSALLVGKDGEPRREWLSALVSEIAAMRAAGQEVIVVSSGAIALGARKLGLAKGGRGS LSDAQAAASVGQIALAGLWAELLAQHGLTAAQILLTLEDLEDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIRFGD NDRLAARVGQAAGASGVLLLSDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAG MALAIIDGQPVAPIAAAMGAARGTLFLPRGRKQARKAWLGGRMRMRGSVQVDAGAAAALARGSSLLAAGVTEVDGDFQRG DAIAVLGPDGRTLARGLSEYDAAECARLKGRHSREHEELLGYAPRSALIHRDQMVLL
Sequences:
>Translated_377_residues MKISQLAQLTQASTCPRLVVKVGSALLVGKDGEPRREWLSALVSEIAAMRAAGQEVIVVSSGAIALGARKLGLAKGGRGS LSDAQAAASVGQIALAGLWAELLAQHGLTAAQILLTLEDLEDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIRFGD NDRLAARVGQAAGASGVLLLSDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAG MALAIIDGQPVAPIAAAMGAARGTLFLPRGRKQARKAWLGGRMRMRGSVQVDAGAAAALARGSSLLAAGVTEVDGDFQRG DAIAVLGPDGRTLARGLSEYDAAECARLKGRHSREHEELLGYAPRSALIHRDQMVLL >Mature_377_residues MKISQLAQLTQASTCPRLVVKVGSALLVGKDGEPRREWLSALVSEIAAMRAAGQEVIVVSSGAIALGARKLGLAKGGRGS LSDAQAAASVGQIALAGLWAELLAQHGLTAAQILLTLEDLEDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIRFGD NDRLAARVGQAAGASGVLLLSDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAG MALAIIDGQPVAPIAAAMGAARGTLFLPRGRKQARKAWLGGRMRMRGSVQVDAGAAAALARGSSLLAAGVTEVDGDFQRG DAIAVLGPDGRTLARGLSEYDAAECARLKGRHSREHEELLGYAPRSALIHRDQMVLL
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI21361368, Length=321, Percent_Identity=28.9719626168224, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI62912457, Length=319, Percent_Identity=29.153605015674, Blast_Score=112, Evalue=8e-25, Organism=Escherichia coli, GI1786437, Length=367, Percent_Identity=42.7792915531335, Blast_Score=244, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17569969, Length=271, Percent_Identity=32.1033210332103, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17569967, Length=271, Percent_Identity=32.1033210332103, Blast_Score=128, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6320506, Length=415, Percent_Identity=32.5301204819277, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321822, Length=426, Percent_Identity=29.5774647887324, Blast_Score=160, Evalue=3e-40, Organism=Drosophila melanogaster, GI21357643, Length=296, Percent_Identity=30.7432432432432, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_NOVAD (Q2G982)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496425.1 - ProteinModelPortal: Q2G982 - SMR: Q2G982 - STRING: Q2G982 - GeneID: 3916443 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1146 - NMPDR: fig|48935.1.peg.2032 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - PhylomeDB: Q2G982 - ProtClustDB: PRK05429 - BioCyc: NARO279238:SARO_1146-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 38909; Mature: 38909
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISQLAQLTQASTCPRLVVKVGSALLVGKDGEPRREWLSALVSEIAAMRAAGQEVIVVS CCHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE SGAIALGARKLGLAKGGRGSLSDAQAAASVGQIALAGLWAELLAQHGLTAAQILLTLEDL CCCEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIRFGDNDRLAARVGQAAGASGVLLL HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEE SDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAG ECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC MALAIIDGQPVAPIAAAMGAARGTLFLPRGRKQARKAWLGGRMRMRGSVQVDAGAAAALA CEEEEECCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCEEECCCEEECCCHHHHHH RGSSLLAAGVTEVDGDFQRGDAIAVLGPDGRTLARGLSEYDAAECARLKGRHSREHEELL CCCHHHCCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GYAPRSALIHRDQMVLL CCCCHHHHHCCCCEEEC >Mature Secondary Structure MKISQLAQLTQASTCPRLVVKVGSALLVGKDGEPRREWLSALVSEIAAMRAAGQEVIVVS CCHHHHHHHHHHCCCHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE SGAIALGARKLGLAKGGRGSLSDAQAAASVGQIALAGLWAELLAQHGLTAAQILLTLEDL CCCEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EDRRRYLNVTATLGTLLAACAVPVINENDSVATQEIRFGDNDRLAARVGQAAGASGVLLL HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEE SDIDGLYDRDPRQPGATRIPVVKGVTPEIHAMATGGSSSGLGSGGMTSKLQAAEIAELAG ECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC MALAIIDGQPVAPIAAAMGAARGTLFLPRGRKQARKAWLGGRMRMRGSVQVDAGAAAALA CEEEEECCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCEEECCCEEECCCHHHHHH RGSSLLAAGVTEVDGDFQRGDAIAVLGPDGRTLARGLSEYDAAECARLKGRHSREHEELL CCCHHHCCCCHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH GYAPRSALIHRDQMVLL CCCCHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA