Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199144
Identifier: 87199144
GI number: 87199144
Start: 1166897
End: 1167280
Strand: Direct
Name: 87199144
Synonym: Saro_1122
Alternate gene names: NA
Gene position: 1166897-1167280 (Clockwise)
Preceding gene: 87199143
Following gene: 87199145
Centisome position: 32.76
GC content: 69.27
Gene sequence:
>384_bases ATGGCCTTCTTCGCCAGATCGCAGTCCAGGCCCGTTGCGGCGACCGGCGTCGAGCCGGCCACGCAGACGAGCCCGCTTGC CTATGTCCCGCCCTCCACCCGTGAACTGCGCGCGCAGGCTGTGCACCGGCTTCAGGTCGGCATGTTCGGGCTTGCCGGAA TGCTGCTGCTGGTCAGCCTTGCCAACGTCATCATGGACAGGGCGAAGTACGTGGATGCGACGGCGGTGAACACGGCCGCG CCCGCGGTCACGGCCAGCGAAACGACCGCCAACGATCCACTGGTCGACATGGGCGTCGCACCCGAGCTTCCGGTGGCCTC GAAAGACAAGCCGGCCGCCCGGCCGGTACCGGCGCGCAACCCCGGCGAAGCGCCAAGCCCCTGA
Upstream 100 bases:
>100_bases CGGGCTTCCGCTATCTCTCCTCGCTCTACAATCCGGAATGGCTCAAGACCAAGGGCCTGCGAGTGTTCCCTTGGCTGGAG CAATGAGGTAGAAGGCGCGC
Downstream 100 bases:
>100_bases CGATGCCGAGGCGCTATCGTGGCCTTGCGATGGCTCTCGTCGCACTGGCCCTCCTGCTCGGCGCATGGCTGCTGGCCGGG CGCGGCCTCGGCAGGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MAFFARSQSRPVAATGVEPATQTSPLAYVPPSTRELRAQAVHRLQVGMFGLAGMLLLVSLANVIMDRAKYVDATAVNTAA PAVTASETTANDPLVDMGVAPELPVASKDKPAARPVPARNPGEAPSP
Sequences:
>Translated_127_residues MAFFARSQSRPVAATGVEPATQTSPLAYVPPSTRELRAQAVHRLQVGMFGLAGMLLLVSLANVIMDRAKYVDATAVNTAA PAVTASETTANDPLVDMGVAPELPVASKDKPAARPVPARNPGEAPSP >Mature_126_residues AFFARSQSRPVAATGVEPATQTSPLAYVPPSTRELRAQAVHRLQVGMFGLAGMLLLVSLANVIMDRAKYVDATAVNTAAP AVTASETTANDPLVDMGVAPELPVASKDKPAARPVPARNPGEAPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13147; Mature: 13016
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFARSQSRPVAATGVEPATQTSPLAYVPPSTRELRAQAVHRLQVGMFGLAGMLLLVSL CCCCCCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVIMDRAKYVDATAVNTAAPAVTASETTANDPLVDMGVAPELPVASKDKPAARPVPARN HHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC PGEAPSP CCCCCCC >Mature Secondary Structure AFFARSQSRPVAATGVEPATQTSPLAYVPPSTRELRAQAVHRLQVGMFGLAGMLLLVSL CCCCCCCCCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVIMDRAKYVDATAVNTAAPAVTASETTANDPLVDMGVAPELPVASKDKPAARPVPARN HHHHHHHHHHCCCHHCCCCCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC PGEAPSP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA