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The map label for this gene is ytfM [C]

Identifier: 87199124

GI number: 87199124

Start: 1144285

End: 1146414

Strand: Direct

Name: ytfM [C]

Synonym: Saro_1102

Alternate gene names: 87199124

Gene position: 1144285-1146414 (Clockwise)

Preceding gene: 87199123

Following gene: 87199125

Centisome position: 32.13

GC content: 67.7

Gene sequence:

>2130_bases
ATGCAGGCCGACCAGGAGCTGGAAGACCTCATTCCCGATTCGGCGGTGCAGAACCCGGATGGGTGGGCGCTGGACACCGA
TGCCGCGCGCACTGGCGCGCCCCCTGCAAGCGTAATCGAGGAGGTCGAGGCCGACGCCCCCATGCCCGACCTGCCAGGCA
TGACCATCCCCTGGCCCGATGGCAGCGACCTGCCGCCGATCGAGCCGCTTTCGCCTGATCCCGACATAGACGTCGCCGAA
CAGGCGACCGATGCCGCCGTCAATGCCCTGCCCGGGCAGGAAGAGGCGGATGCGCCCGCCAATGTGCGGCTGGCCGATGC
CGATGTGAGGCGCGTGGGCAAGCAGGTCGAACTGGCTTTTCCCGTCGGCGCGGAGGCGATTGCCGACCAGGGCGCGATCA
CGGAGCGGTTCGCAGGTCTTTCCAGCCTCAAGTCCTTCGACGACGATGAGGACAACCTCGCCCAGATCGTCCGCCGCGCG
CGGACGGACAGGGAGTTGCTGGCCGAGATCATGCGGGTTCACGGCTACTACGACGCGCAGATCTACCAGTCCCTGGGCGG
GCTGGGCGACGCGGCCGAAGGCGACGGCAGCGCCCCGATCGATGTCGAGAAGGTCGTCGTGCGCTACGATATCCAGCCCG
GTCCGCAGTACCACTTCGGCAAGCTGGCATTCGGGGACCTGGCGGCTAGCGGCCCGGACTACGATCTTCTGCGCGGCGCC
TTCGAACTCAAGACGGGCGATGCGATCAATTCCGACAAGGTCGCGGCCGAGCGCGAGGATCTCCGGACCGCGCTGGGCGA
AAATGGCTACGCCTTTGCCAAGGTGGGCGATCCCGACCTGCTGATCGATCACGAAAGGCGCGAGGGCGACCTGACCTTGC
CGGTGACGCCGGGCGGCGTGTACCGCTTCGGACGCATCGTTTCCTCGCGCGAGAAGTTCCTGAGTTCGCACCACCTGCAA
CGCATTGCGCGCTTCGATCCAGGCGAGCGCTTCAAGCGTTCGGAAGTCGATGACCTGCGTCAGGCGATCCTGGCGACGGG
GCTGGTGTCCTCGGTGACGGTCGAGGCGCGCAAGACGGCGGAGCCTGCGGACGGCCAGCCGGGCGACGTCGACATCGATG
TTGCCCTGACGCCCGCGCCCGTGCGCACGATTGCCGGGCTGGTCGGCTATTCGAGCGGCGAAGGCTTCCGCGTCGAGGCG
CAATGGGAACATCGCAACTTCTTCCCGCCGGAAGGCATGTTGCGCCTGCGCGGCGTGGCTGGCACGCAGGAGCAGCTTGC
GGGCGTAACGTTCCGCCGCAACAACTTCCTGACCCGCGACCTCGTGCTCAATGCCGACCTCTACGCGCGCAACCAGAAGA
GCGACGCCTATCAGGCGCGCACCCTTTCGCTGACCGCCGGGATCGAGCGGCAGACGACCCTGCTGTTCCAGAAGCCGTGG
GTCTTTTCCGCCGGCCTCGAGGCAGTGGCGACGTCGGAACGGGACGCGGCGGCGATCCTGGCAGGCGAGCCCCGCAAGAC
CTATTTCGTAGGCGCCCTGCCGATGCGCGCGGCTTATGACGGCAGCGACAGCCTGCTCGACCCGACGCGGGGCTTCCGCG
TGGGCCTGCGCCTTTCGCCCGAGCTTTCGGTGCAGGATGGCGTGAAGTCGACCTATGGCAAGGTCCAGCTGGACGCCAGC
TACTACCAGCCGTTCGGCGAGAGCGTCGTCATGGCCGGCCGCGTCCGCCTGGGGACGATTACCGGCACCGACATCGAGAA
CATCGCGCCGTCCCGCCGCTTCTATGCGGGCGGCGGCGGATCGGTGCGCGGCTATGGCTACCAGCAGATCGGCCCGCGCG
ACACGCTGGGCGAGCCGAGCGGCGGCCGGGCGCTGACCGAGTTCTCGCTGGAAGCGCGCGTGAAGACCGGGCTGTTCGGC
GGCGCGGTCAGCGTGGTGCCCTTCGTGGACGCGGGCGCGGTGGATACTTCGACCACGCCGAAGTTCGATGACCTCAAGAT
CGGTGTCGGTGTCGGCCTGCGCTATCAGACCAACTTCGGTCCGATCCGAATTGACGTGGGCACGCCGCTCAACCCCTCGA
AGGGCGACAGCCGCATTGGCGTCTACGTCGCACTGGGGCAGGCGTTTTGA

Upstream 100 bases:

>100_bases
GGCGCGCAGGAGCGTTACGCGCACATCTGATTCTCCGCTCTGCCGTGTCCTGGCCGCGCTGATCGCGCTGGCATCGCCCT
TCCAGGCCTTCGCCCAGTCG

Downstream 100 bases:

>100_bases
TGGCGGAGGACGCCGTCCTTCCCGACGAACCCCGGCGGCCTGAACGTTCGCGCCGGTCGCGGATCGTGCGCGGCATCGCG
CGGCGAGGCGCGATCCTGCT

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MQADQELEDLIPDSAVQNPDGWALDTDAARTGAPPASVIEEVEADAPMPDLPGMTIPWPDGSDLPPIEPLSPDPDIDVAE
QATDAAVNALPGQEEADAPANVRLADADVRRVGKQVELAFPVGAEAIADQGAITERFAGLSSLKSFDDDEDNLAQIVRRA
RTDRELLAEIMRVHGYYDAQIYQSLGGLGDAAEGDGSAPIDVEKVVVRYDIQPGPQYHFGKLAFGDLAASGPDYDLLRGA
FELKTGDAINSDKVAAEREDLRTALGENGYAFAKVGDPDLLIDHERREGDLTLPVTPGGVYRFGRIVSSREKFLSSHHLQ
RIARFDPGERFKRSEVDDLRQAILATGLVSSVTVEARKTAEPADGQPGDVDIDVALTPAPVRTIAGLVGYSSGEGFRVEA
QWEHRNFFPPEGMLRLRGVAGTQEQLAGVTFRRNNFLTRDLVLNADLYARNQKSDAYQARTLSLTAGIERQTTLLFQKPW
VFSAGLEAVATSERDAAAILAGEPRKTYFVGALPMRAAYDGSDSLLDPTRGFRVGLRLSPELSVQDGVKSTYGKVQLDAS
YYQPFGESVVMAGRVRLGTITGTDIENIAPSRRFYAGGGGSVRGYGYQQIGPRDTLGEPSGGRALTEFSLEARVKTGLFG
GAVSVVPFVDAGAVDTSTTPKFDDLKIGVGVGLRYQTNFGPIRIDVGTPLNPSKGDSRIGVYVALGQAF

Sequences:

>Translated_709_residues
MQADQELEDLIPDSAVQNPDGWALDTDAARTGAPPASVIEEVEADAPMPDLPGMTIPWPDGSDLPPIEPLSPDPDIDVAE
QATDAAVNALPGQEEADAPANVRLADADVRRVGKQVELAFPVGAEAIADQGAITERFAGLSSLKSFDDDEDNLAQIVRRA
RTDRELLAEIMRVHGYYDAQIYQSLGGLGDAAEGDGSAPIDVEKVVVRYDIQPGPQYHFGKLAFGDLAASGPDYDLLRGA
FELKTGDAINSDKVAAEREDLRTALGENGYAFAKVGDPDLLIDHERREGDLTLPVTPGGVYRFGRIVSSREKFLSSHHLQ
RIARFDPGERFKRSEVDDLRQAILATGLVSSVTVEARKTAEPADGQPGDVDIDVALTPAPVRTIAGLVGYSSGEGFRVEA
QWEHRNFFPPEGMLRLRGVAGTQEQLAGVTFRRNNFLTRDLVLNADLYARNQKSDAYQARTLSLTAGIERQTTLLFQKPW
VFSAGLEAVATSERDAAAILAGEPRKTYFVGALPMRAAYDGSDSLLDPTRGFRVGLRLSPELSVQDGVKSTYGKVQLDAS
YYQPFGESVVMAGRVRLGTITGTDIENIAPSRRFYAGGGGSVRGYGYQQIGPRDTLGEPSGGRALTEFSLEARVKTGLFG
GAVSVVPFVDAGAVDTSTTPKFDDLKIGVGVGLRYQTNFGPIRIDVGTPLNPSKGDSRIGVYVALGQAF
>Mature_709_residues
MQADQELEDLIPDSAVQNPDGWALDTDAARTGAPPASVIEEVEADAPMPDLPGMTIPWPDGSDLPPIEPLSPDPDIDVAE
QATDAAVNALPGQEEADAPANVRLADADVRRVGKQVELAFPVGAEAIADQGAITERFAGLSSLKSFDDDEDNLAQIVRRA
RTDRELLAEIMRVHGYYDAQIYQSLGGLGDAAEGDGSAPIDVEKVVVRYDIQPGPQYHFGKLAFGDLAASGPDYDLLRGA
FELKTGDAINSDKVAAEREDLRTALGENGYAFAKVGDPDLLIDHERREGDLTLPVTPGGVYRFGRIVSSREKFLSSHHLQ
RIARFDPGERFKRSEVDDLRQAILATGLVSSVTVEARKTAEPADGQPGDVDIDVALTPAPVRTIAGLVGYSSGEGFRVEA
QWEHRNFFPPEGMLRLRGVAGTQEQLAGVTFRRNNFLTRDLVLNADLYARNQKSDAYQARTLSLTAGIERQTTLLFQKPW
VFSAGLEAVATSERDAAAILAGEPRKTYFVGALPMRAAYDGSDSLLDPTRGFRVGLRLSPELSVQDGVKSTYGKVQLDAS
YYQPFGESVVMAGRVRLGTITGTDIENIAPSRRFYAGGGGSVRGYGYQQIGPRDTLGEPSGGRALTEFSLEARVKTGLFG
GAVSVVPFVDAGAVDTSTTPKFDDLKIGVGVGLRYQTNFGPIRIDVGTPLNPSKGDSRIGVYVALGQAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=423, Percent_Identity=26.0047281323877, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 76102; Mature: 76102

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADQELEDLIPDSAVQNPDGWALDTDAARTGAPPASVIEEVEADAPMPDLPGMTIPWPD
CCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCC
GSDLPPIEPLSPDPDIDVAEQATDAAVNALPGQEEADAPANVRLADADVRRVGKQVELAF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCCCEEEEEE
PVGAEAIADQGAITERFAGLSSLKSFDDDEDNLAQIVRRARTDRELLAEIMRVHGYYDAQ
CCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
IYQSLGGLGDAAEGDGSAPIDVEKVVVRYDIQPGPQYHFGKLAFGDLAASGPDYDLLRGA
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHCCCCCCHHHHHCC
FELKTGDAINSDKVAAEREDLRTALGENGYAFAKVGDPDLLIDHERREGDLTLPVTPGGV
CEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCH
YRFGRIVSSREKFLSSHHLQRIARFDPGERFKRSEVDDLRQAILATGLVSSVTVEARKTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHCC
EPADGQPGDVDIDVALTPAPVRTIAGLVGYSSGEGFRVEAQWEHRNFFPPEGMLRLRGVA
CCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEECCC
GTQEQLAGVTFRRNNFLTRDLVLNADLYARNQKSDAYQARTLSLTAGIERQTTLLFQKPW
CCHHHHHCEEEECCCCEEEHEEECCHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCC
VFSAGLEAVATSERDAAAILAGEPRKTYFVGALPMRAAYDGSDSLLDPTRGFRVGLRLSP
EECCCCHHHHCCCCCCEEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECC
ELSVQDGVKSTYGKVQLDASYYQPFGESVVMAGRVRLGTITGTDIENIAPSRRFYAGGGG
CCCHHHCCHHCCCEEEECHHHHCCCCCCEEEECCEEEEEEECCCHHHCCCCCEEEECCCC
SVRGYGYQQIGPRDTLGEPSGGRALTEFSLEARVKTGLFGGAVSVVPFVDAGAVDTSTTP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KFDDLKIGVGVGLRYQTNFGPIRIDVGTPLNPSKGDSRIGVYVALGQAF
CCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MQADQELEDLIPDSAVQNPDGWALDTDAARTGAPPASVIEEVEADAPMPDLPGMTIPWPD
CCCHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCC
GSDLPPIEPLSPDPDIDVAEQATDAAVNALPGQEEADAPANVRLADADVRRVGKQVELAF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCCCEEEEEE
PVGAEAIADQGAITERFAGLSSLKSFDDDEDNLAQIVRRARTDRELLAEIMRVHGYYDAQ
CCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH
IYQSLGGLGDAAEGDGSAPIDVEKVVVRYDIQPGPQYHFGKLAFGDLAASGPDYDLLRGA
HHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHCCCCCCHHHHHCC
FELKTGDAINSDKVAAEREDLRTALGENGYAFAKVGDPDLLIDHERREGDLTLPVTPGGV
CEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCH
YRFGRIVSSREKFLSSHHLQRIARFDPGERFKRSEVDDLRQAILATGLVSSVTVEARKTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHEEEEHHHCC
EPADGQPGDVDIDVALTPAPVRTIAGLVGYSSGEGFRVEAQWEHRNFFPPEGMLRLRGVA
CCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEECCC
GTQEQLAGVTFRRNNFLTRDLVLNADLYARNQKSDAYQARTLSLTAGIERQTTLLFQKPW
CCHHHHHCEEEECCCCEEEHEEECCHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCC
VFSAGLEAVATSERDAAAILAGEPRKTYFVGALPMRAAYDGSDSLLDPTRGFRVGLRLSP
EECCCCHHHHCCCCCCEEEEECCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECC
ELSVQDGVKSTYGKVQLDASYYQPFGESVVMAGRVRLGTITGTDIENIAPSRRFYAGGGG
CCCHHHCCHHCCCEEEECHHHHCCCCCCEEEECCEEEEEEECCCHHHCCCCCEEEECCCC
SVRGYGYQQIGPRDTLGEPSGGRALTEFSLEARVKTGLFGGAVSVVPFVDAGAVDTSTTP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
KFDDLKIGVGVGLRYQTNFGPIRIDVGTPLNPSKGDSRIGVYVALGQAF
CCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]