Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is ate
Identifier: 87199123
GI number: 87199123
Start: 1143360
End: 1144214
Strand: Direct
Name: ate
Synonym: Saro_1101
Alternate gene names: 87199123
Gene position: 1143360-1144214 (Clockwise)
Preceding gene: 87199122
Following gene: 87199124
Centisome position: 32.1
GC content: 63.63
Gene sequence:
>855_bases GTGACCGCGCCCGTCCGTTTCCCGCGCTTCTTCGTGACCAGCCCCGCGCCGTGCCCTTACCTGCCCGGGCGGAGCGAGCG AAAGGTGTTCACCGAGCTCAAGGGCGCGAATGCCGATGAGCTTAACGACGCGCTGGGCCGAATCGGCTTTCGCCGGAGCC AGACCGTCGCCTACCGGCCGAGCTGCATCGATTGCCAGGCCTGCGTTTCGGTCAGGGTCGTGACGGGGGAGTTCAGGCCC TCGTCCACGCAGAAGCGAATCCACAAGCGCAATCGCGATCTTGAAGTAAGTATCTGCAAGGCTTGGTCGACTCCGGAACA GTTCGAGCTTTTGCAGCGTTATCTCGCCGTGCGTCATCCAGGCGGCGGGATGGCGGCCATGGACGAGATGGATTTCGCGG ACATGGTGGAGCACACGCCGGTCAAGAGTTACGTGATTGAATACAGGGAGCCCACCGTGGACGGCTCGCAGGGAAGGCTG GTAGGGGCCTGCCTGACCGACGAGCAGGGCGACGGTCTCTCGATGATCTACAGCTTCTACGATCCACAACACGAGACGCG GTCCGGGCTTGGCACCTTCATCATCCTCGACCATATCCAGCGTGCGGCCCGCGCGGGTTTGCCCTACGTGTACCTCGGCT ATTGGGTCGAGGGCTCGGAGCGCATGCAATACAAGGTGCGTTTCCGCCCGATGGAGAAGCTGGGCCGCGATGGCTGGGAA CGGTTCGAACCTGCTGAACAGGCCAGCGCCATCGAGCGGGCTGTCACTGCCCGCAAGTGCGAGCCGGCAAGTCTTGTCGA AGGCAGCCTCAAGGACGGCGTCCACGGCGCGCAGGAGCGTTACGCGCACATCTGA
Upstream 100 bases:
>100_bases CCGAATGTGTGGTTAACGGGGCTTTAACCTGGGCGCCGGGTGCGGCATTGTCGCAATTGACAGGGCGGATCGTCCGACCT GAGGAGGCATTCGCAAGCTC
Downstream 100 bases:
>100_bases TTCTCCGCTCTGCCGTGTCCTGGCCGCGCTGATCGCGCTGGCATCGCCCTTCCAGGCCTTCGCCCAGTCGATGCAGGCCG ACCAGGAGCTGGAAGACCTC
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAPVRFPRFFVTSPAPCPYLPGRSERKVFTELKGANADELNDALGRIGFRRSQTVAYRPSCIDCQACVSVRVVTGEFRP SSTQKRIHKRNRDLEVSICKAWSTPEQFELLQRYLAVRHPGGGMAAMDEMDFADMVEHTPVKSYVIEYREPTVDGSQGRL VGACLTDEQGDGLSMIYSFYDPQHETRSGLGTFIILDHIQRAARAGLPYVYLGYWVEGSERMQYKVRFRPMEKLGRDGWE RFEPAEQASAIERAVTARKCEPASLVEGSLKDGVHGAQERYAHI
Sequences:
>Translated_284_residues MTAPVRFPRFFVTSPAPCPYLPGRSERKVFTELKGANADELNDALGRIGFRRSQTVAYRPSCIDCQACVSVRVVTGEFRP SSTQKRIHKRNRDLEVSICKAWSTPEQFELLQRYLAVRHPGGGMAAMDEMDFADMVEHTPVKSYVIEYREPTVDGSQGRL VGACLTDEQGDGLSMIYSFYDPQHETRSGLGTFIILDHIQRAARAGLPYVYLGYWVEGSERMQYKVRFRPMEKLGRDGWE RFEPAEQASAIERAVTARKCEPASLVEGSLKDGVHGAQERYAHI >Mature_283_residues TAPVRFPRFFVTSPAPCPYLPGRSERKVFTELKGANADELNDALGRIGFRRSQTVAYRPSCIDCQACVSVRVVTGEFRPS STQKRIHKRNRDLEVSICKAWSTPEQFELLQRYLAVRHPGGGMAAMDEMDFADMVEHTPVKSYVIEYREPTVDGSQGRLV GACLTDEQGDGLSMIYSFYDPQHETRSGLGTFIILDHIQRAARAGLPYVYLGYWVEGSERMQYKVRFRPMEKLGRDGWER FEPAEQASAIERAVTARKCEPASLVEGSLKDGVHGAQERYAHI
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_NOVAD (Q2G9C7)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496380.1 - STRING: Q2G9C7 - GeneID: 3916397 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1101 - NMPDR: fig|48935.1.peg.1524 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: NARO279238:SARO_1101-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 32063; Mature: 31932
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPVRFPRFFVTSPAPCPYLPGRSERKVFTELKGANADELNDALGRIGFRRSQTVAYRP CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECC SCIDCQACVSVRVVTGEFRPSSTQKRIHKRNRDLEVSICKAWSTPEQFELLQRYLAVRHP CCCCHHHHEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC GGGMAAMDEMDFADMVEHTPVKSYVIEYREPTVDGSQGRLVGACLTDEQGDGLSMIYSFY CCCCCHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHH DPQHETRSGLGTFIILDHIQRAARAGLPYVYLGYWVEGSERMQYKVRFRPMEKLGRDGWE CCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCHHHHCCCHHH RFEPAEQASAIERAVTARKCEPASLVEGSLKDGVHGAQERYAHI HCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCHHHHHHCCC >Mature Secondary Structure TAPVRFPRFFVTSPAPCPYLPGRSERKVFTELKGANADELNDALGRIGFRRSQTVAYRP CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECC SCIDCQACVSVRVVTGEFRPSSTQKRIHKRNRDLEVSICKAWSTPEQFELLQRYLAVRHP CCCCHHHHEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC GGGMAAMDEMDFADMVEHTPVKSYVIEYREPTVDGSQGRLVGACLTDEQGDGLSMIYSFY CCCCCHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHH DPQHETRSGLGTFIILDHIQRAARAGLPYVYLGYWVEGSERMQYKVRFRPMEKLGRDGWE CCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECCHHHHCCCHHH RFEPAEQASAIERAVTARKCEPASLVEGSLKDGVHGAQERYAHI HCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA