Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199110

Identifier: 87199110

GI number: 87199110

Start: 1131056

End: 1131718

Strand: Direct

Name: 87199110

Synonym: Saro_1088

Alternate gene names: NA

Gene position: 1131056-1131718 (Clockwise)

Preceding gene: 87199106

Following gene: 87199111

Centisome position: 31.76

GC content: 69.68

Gene sequence:

>663_bases
ATGATCGCATCCGCCCGCCGTATCGCCCTCCTGGGCGCCCCGCTCGTGGCCGCGCTCGCGCTGTCGGCCTGTGGCGGCGG
ACGCGGCGAGCTTGTGGTGGACGAAGCAGTCGGCGTGAAGGCGCTGCGCGATCCCTGTCCGCGCGTCGGCGTGCCCGACT
ATACCGGCGACGTGACCCTGTTCACGGCGCCAGGCCGTACCGATTCGGGCGCGATCGACGTCGAGGCGGCGATCACCAAC
GTGCGCAGCCAGTGCACCGATGGCGACAAGCTCTATTCGGTGGCTTCCTTCGACGTGCTCGCCCGCCGCACCGACACGCG
CGGCGCGCGCCGTGTCGAACTGCCCTATTTCTCCACCGTGGTTCGCGGCGGCAACATCGTCGTCGCCAAGCGCCTGGGCA
AGGTCGTGCTGGACTTCGCCGATGGCCAGGCCCGCGCGTCCGCCAAGGCGGAAGCAGGCGCCTATGTCGAGAAGTCCGAA
GCCTCGCTGCCCGAGGACATCGTGAAGCGCATCTCGCGCAAGCGCCGCGCGGGTGACGAGGATGCCGCGGTCGATCCGCT
GTCGCAGCCCGAGGTCAAGGCCGCCCTGGCTCGCGCCAACTTCGAACTCCTCGTCGGCTTCCAGCTCACCGACGACCAGC
TCCAGTACAACGTCCGCCGCTGA

Upstream 100 bases:

>100_bases
CCGCCTGCCATTGCCGAAAGCGGCTGTGGTGGGTAGAGGTGGCGCAAATCTCGGCCAGATCGCCGCGACACAAGCCGCAA
TTGCCAAGGATAGAGTGCCC

Downstream 100 bases:

>100_bases
CGGACCGTTTATCCGGGCCGATTGCGGGAACAGGAAAGGGCGTCTGATCGGCGCCCTTTCGCTTTTGGCGCGATTGGGCT
AACCGCCCGCCCATGACTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIASARRIALLGAPLVAALALSACGGGRGELVVDEAVGVKALRDPCPRVGVPDYTGDVTLFTAPGRTDSGAIDVEAAITN
VRSQCTDGDKLYSVASFDVLARRTDTRGARRVELPYFSTVVRGGNIVVAKRLGKVVLDFADGQARASAKAEAGAYVEKSE
ASLPEDIVKRISRKRRAGDEDAAVDPLSQPEVKAALARANFELLVGFQLTDDQLQYNVRR

Sequences:

>Translated_220_residues
MIASARRIALLGAPLVAALALSACGGGRGELVVDEAVGVKALRDPCPRVGVPDYTGDVTLFTAPGRTDSGAIDVEAAITN
VRSQCTDGDKLYSVASFDVLARRTDTRGARRVELPYFSTVVRGGNIVVAKRLGKVVLDFADGQARASAKAEAGAYVEKSE
ASLPEDIVKRISRKRRAGDEDAAVDPLSQPEVKAALARANFELLVGFQLTDDQLQYNVRR
>Mature_220_residues
MIASARRIALLGAPLVAALALSACGGGRGELVVDEAVGVKALRDPCPRVGVPDYTGDVTLFTAPGRTDSGAIDVEAAITN
VRSQCTDGDKLYSVASFDVLARRTDTRGARRVELPYFSTVVRGGNIVVAKRLGKVVLDFADGQARASAKAEAGAYVEKSE
ASLPEDIVKRISRKRRAGDEDAAVDPLSQPEVKAALARANFELLVGFQLTDDQLQYNVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23358; Mature: 23358

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASARRIALLGAPLVAALALSACGGGRGELVVDEAVGVKALRDPCPRVGVPDYTGDVTL
CCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCEEE
FTAPGRTDSGAIDVEAAITNVRSQCTDGDKLYSVASFDVLARRTDTRGARRVELPYFSTV
EECCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHH
VRGGNIVVAKRLGKVVLDFADGQARASAKAEAGAYVEKSEASLPEDIVKRISRKRRAGDE
HCCCCEEEEEHHCCEEEEECCCCHHHCCCHHCCCEEECCCCCCCHHHHHHHHHHHCCCCC
DAAVDPLSQPEVKAALARANFELLVGFQLTDDQLQYNVRR
CCCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHEECCC
>Mature Secondary Structure
MIASARRIALLGAPLVAALALSACGGGRGELVVDEAVGVKALRDPCPRVGVPDYTGDVTL
CCCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCEEE
FTAPGRTDSGAIDVEAAITNVRSQCTDGDKLYSVASFDVLARRTDTRGARRVELPYFSTV
EECCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHH
VRGGNIVVAKRLGKVVLDFADGQARASAKAEAGAYVEKSEASLPEDIVKRISRKRRAGDE
HCCCCEEEEEHHCCEEEEECCCCHHHCCCHHCCCEEECCCCCCCHHHHHHHHHHHCCCCC
DAAVDPLSQPEVKAALARANFELLVGFQLTDDQLQYNVRR
CCCCCCCCCHHHHHHHHHCCEEEEEEEEECCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA