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The map label for this gene is omp16 [H]

Identifier: 87199040

GI number: 87199040

Start: 1057969

End: 1058481

Strand: Direct

Name: omp16 [H]

Synonym: Saro_1018

Alternate gene names: 87199040

Gene position: 1057969-1058481 (Clockwise)

Preceding gene: 87199039

Following gene: 87199041

Centisome position: 29.71

GC content: 67.64

Gene sequence:

>513_bases
ATGTCCCGTCCGCTTCTGATCGCCGGCCTCGCCGCCGCAACGCTCAGCCTTGGCGCCTGCGCGTCCAAGCCCAAGCAGCT
TCCGCCTGAGCCCGGCACCACGACGACGACGCAGACCGCGCCGCCGCCGGCACAGCCCACTGGTCCCGCCCCGGGCAGCC
AGGCCGATTTCATGGCCTCGATCATTTCGGACACCGTCAACTTCGATACCGACCGCTACAACATCGACGCCGCGGACCAG
GGCGTGTTGCAGAGCCAGGCCGCATGGCTTGCCCGCTATCCGGGCAAGGCCATCACCATCGAAGGCCACTGCGACGAGCG
TGGCACGCGTGACTACAATATCGCGCTTGGCGAACGCCGCGCCAACTCGGCCAAGAACTACCTCGTCAGCCTCGGCGTCG
ACCCGGGCCGCATCACCACCGTCAGCTACGGCAAGGAACGCCCGCTGGCGCTTGGTTCGGACGAGGATTCGTGGGCGAAG
AACCGCCGCGCGGTGACCGTCACGGTCAACTGA

Upstream 100 bases:

>100_bases
CCGATCCGGTGCAAACGTCGTGGCCATGGAGCTTGTCATTTCATCGCCGGATATGCACGATACGTCGCCCCTCTCCCAAT
CCCTCCCAAAGGAGATAGCA

Downstream 100 bases:

>100_bases
GGAGGCTGCGGCTGCCGCAGTTCCGAAATGCAAGGCCCGGTCCGCAACGGTCCGGGCCTTTTGCATGGGAAGGGCGGTTC
CCATCTTGACGTTTGCCCAC

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMASIISDTVNFDTDRYNIDAADQ
GVLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERRANSAKNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAK
NRRAVTVTVN

Sequences:

>Translated_170_residues
MSRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMASIISDTVNFDTDRYNIDAADQ
GVLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERRANSAKNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAK
NRRAVTVTVN
>Mature_169_residues
SRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMASIISDTVNFDTDRYNIDAADQG
VLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERRANSAKNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAKN
RRAVTVTVN

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=105, Percent_Identity=50.4761904761905, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI48994946, Length=100, Percent_Identity=34, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17955; Mature: 17824

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMAS
CCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IISDTVNFDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERR
HHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCC
ANSAKNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAKNRRAVTVTVN
CCCCCCEEEEECCCCCEEEEEECCCCCCEEECCCCCHHHCCCEEEEEEEC
>Mature Secondary Structure 
SRPLLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMAS
CCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IISDTVNFDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERR
HHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCC
ANSAKNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAKNRRAVTVTVN
CCCCCCEEEEECCCCCEEEEEECCCCCCEEECCCCCHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]