Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is tolQ [H]
Identifier: 87199036
GI number: 87199036
Start: 1054424
End: 1055125
Strand: Direct
Name: tolQ [H]
Synonym: Saro_1014
Alternate gene names: 87199036
Gene position: 1054424-1055125 (Clockwise)
Preceding gene: 87199035
Following gene: 87199037
Centisome position: 29.61
GC content: 66.1
Gene sequence:
>702_bases ATGACCCTCCAGATGCTTGCCAACGGCGTTTCCTTCGCGCCGACCTCGCTCAATCCGGTGCAACTGTTCCTCGATGCCGA CTATGTCGTGCAGGCGGTCATGGCGGGCCTCGTGCTCGCGAGCATCTGGACGTGGACGATCATCATCGGCTTCTCGCTTA AGATGGGCAGCGTCCAGCGCGGCTGCGACGCGTATGAGCGCGAATTCTGGGAAGCGCGCGACATCGACCAGTTCCACAAG GACAACAAGGGCAAGGACCTGCCATCGGTGCGCGTGGTCGCGGCCGCGCTGACCGAATGGCGCCGGTCCACCTCGGGCAG CGCTATCGATCGCGATGGCACCCGGCAGCGGCTGACGACCGCGCTCGATGGGGCGGTGGTGGCCGAGACCGATGCACTCG CCAGCCGCCTGAACTTCCTCGCCACGGTCGGGTCGGTGGCGCCCTTCGTCGGGCTGTTCGGCACGGTCTGGGGCATCATG GACAGCTTTTTCAACATCGGCGCGCAGCAGAACTCCTCGCTCGCCGTCGTCGCTCCCGGCATTTCCGAGGCGCTGTTCGC CACGGCCATCGGCCTTTTCGCGGCGATCCCGGCGGTCATCGCGTACAATCGCTTCTCGCACCGCGTGAACCGCTTCGAGA CGCGCCTCTACCGCTTCGCCGACCGGTTCCACGCCTCGCTCAGCCGCGAACTGGAGGTCTGA
Upstream 100 bases:
>100_bases TGGCCTTCGTCGCTCCCAACGGTCGCCCACGCCGCCAGCCGCGCGAGTGGGTGGCAGCCTTCCAGACCATCACTTCCGCT CCTGAAGGACCGAATTGCGA
Downstream 100 bases:
>100_bases GCCATGGCGATGTCCGTCGGAGGCGGTGGAGGTGGCGGCCGTGGCAGGCGCGGCCGTGGTGGCCGTGCCGCGATGAGCGA GATCAACGTCACGCCGCTGG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTLQMLANGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQRGCDAYEREFWEARDIDQFHK DNKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAVVAETDALASRLNFLATVGSVAPFVGLFGTVWGIM DSFFNIGAQQNSSLAVVAPGISEALFATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELEV
Sequences:
>Translated_233_residues MTLQMLANGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQRGCDAYEREFWEARDIDQFHK DNKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAVVAETDALASRLNFLATVGSVAPFVGLFGTVWGIM DSFFNIGAQQNSSLAVVAPGISEALFATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELEV >Mature_232_residues TLQMLANGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQRGCDAYEREFWEARDIDQFHKD NKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTTALDGAVVAETDALASRLNFLATVGSVAPFVGLFGTVWGIMD SFFNIGAQQNSSLAVVAPGISEALFATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELEV
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=219, Percent_Identity=37.8995433789954, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI1789381, Length=228, Percent_Identity=39.0350877192982, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25502; Mature: 25371
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQMLANGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQR CCHHHHHCCCCCCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GCDAYEREFWEARDIDQFHKDNKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTT HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ALDGAVVAETDALASRLNFLATVGSVAPFVGLFGTVWGIMDSFFNIGAQQNSSLAVVAPG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC ISEALFATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLQMLANGVSFAPTSLNPVQLFLDADYVVQAVMAGLVLASIWTWTIIIGFSLKMGSVQR CHHHHHCCCCCCCCCCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GCDAYEREFWEARDIDQFHKDNKGKDLPSVRVVAAALTEWRRSTSGSAIDRDGTRQRLTT HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ALDGAVVAETDALASRLNFLATVGSVAPFVGLFGTVWGIMDSFFNIGAQQNSSLAVVAPG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC ISEALFATAIGLFAAIPAVIAYNRFSHRVNRFETRLYRFADRFHASLSRELEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]