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The map label for this gene is ybgC [C]

Identifier: 87199035

GI number: 87199035

Start: 1053963

End: 1054427

Strand: Direct

Name: ybgC [C]

Synonym: Saro_1013

Alternate gene names: 87199035

Gene position: 1053963-1054427 (Clockwise)

Preceding gene: 87199034

Following gene: 87199036

Centisome position: 29.59

GC content: 66.45

Gene sequence:

>465_bases
ATGTCCTTGCCCCAGCCGCCCTCCGGCCGTTTCGACGGCAACGAACACCTCTACGCCGTCCGCGTCTACTTCGAAGACAC
GGACCTGTCGGGCGTGGTCTATCATGCCAACTACCTGCGCTGGTTCGAACGCGCCCGGTCCGACATGCTCCGGCTTCTCG
GCATAGACCAGCGCGCCGCGCACGAGGCGGGCGAGGGCGCCTATGCCGTCAGCGAAATGGACCTGCGTTACGTCCGCCCC
GCGCGTCTCGACGACGATGTGCTGATCCGCAGCCACGTGGCCCAACTATCGCCCGCCACATGCCGTATCGTGCAGCGTGC
GTTCAGGGACGACACGCTCCTGTGCGAAGCGGAGGTCCGCGTGGCCTTCGTCGCTCCCAACGGTCGCCCACGCCGCCAGC
CGCGCGAGTGGGTGGCAGCCTTCCAGACCATCACTTCCGCTCCTGAAGGACCGAATTGCGAATGA

Upstream 100 bases:

>100_bases
GCTCGGACCGATGCTGGTGCGGTGAAACGGGTCGAAGCGGGGGTTATCGGTTAACCGGCCCTTGCCCTTCGACTCGTCGC
AAGGGTAGGGTCGCGGTCGA

Downstream 100 bases:

>100_bases
CCCTCCAGATGCTTGCCAACGGCGTTTCCTTCGCGCCGACCTCGCTCAATCCGGTGCAACTGTTCCTCGATGCCGACTAT
GTCGTGCAGGCGGTCATGGC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSLPQPPSGRFDGNEHLYAVRVYFEDTDLSGVVYHANYLRWFERARSDMLRLLGIDQRAAHEAGEGAYAVSEMDLRYVRP
ARLDDDVLIRSHVAQLSPATCRIVQRAFRDDTLLCEAEVRVAFVAPNGRPRRQPREWVAAFQTITSAPEGPNCE

Sequences:

>Translated_154_residues
MSLPQPPSGRFDGNEHLYAVRVYFEDTDLSGVVYHANYLRWFERARSDMLRLLGIDQRAAHEAGEGAYAVSEMDLRYVRP
ARLDDDVLIRSHVAQLSPATCRIVQRAFRDDTLLCEAEVRVAFVAPNGRPRRQPREWVAAFQTITSAPEGPNCE
>Mature_153_residues
SLPQPPSGRFDGNEHLYAVRVYFEDTDLSGVVYHANYLRWFERARSDMLRLLGIDQRAAHEAGEGAYAVSEMDLRYVRPA
RLDDDVLIRSHVAQLSPATCRIVQRAFRDDTLLCEAEVRVAFVAPNGRPRRQPREWVAAFQTITSAPEGPNCE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=125, Percent_Identity=43.2, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17505; Mature: 17374

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPQPPSGRFDGNEHLYAVRVYFEDTDLSGVVYHANYLRWFERARSDMLRLLGIDQRAA
CCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHH
HEAGEGAYAVSEMDLRYVRPARLDDDVLIRSHVAQLSPATCRIVQRAFRDDTLLCEAEVR
HCCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEE
VAFVAPNGRPRRQPREWVAAFQTITSAPEGPNCE
EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLPQPPSGRFDGNEHLYAVRVYFEDTDLSGVVYHANYLRWFERARSDMLRLLGIDQRAA
CCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHH
HEAGEGAYAVSEMDLRYVRPARLDDDVLIRSHVAQLSPATCRIVQRAFRDDTLLCEAEVR
HCCCCCCEEEECCCCEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEE
VAFVAPNGRPRRQPREWVAAFQTITSAPEGPNCE
EEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]