Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198948

Identifier: 87198948

GI number: 87198948

Start: 977579

End: 977815

Strand: Direct

Name: 87198948

Synonym: Saro_0926

Alternate gene names: NA

Gene position: 977579-977815 (Clockwise)

Preceding gene: 87198947

Following gene: 87198949

Centisome position: 27.45

GC content: 66.67

Gene sequence:

>237_bases
ATGGCGAGGCTGGTCTTCATGGGGCGGCTGGAAGACGTCGCGGGGACGGGCGAACTCGCGGTGGAGGCAGGCCCGGTCGA
ACGGATACTGGCGGCGCTTGATCCGGCCTTGGCGGTCGAACTTCTGGGCGAGAAGGTGCGGATGGCGCTCAACGGCAGGT
TGCTGACCGACATGGGCGGCGTTGTACTCGGCGATGGGGATGAACTCGCATTTCTCCCGCCGGTCAGCGGAGGCTGA

Upstream 100 bases:

>100_bases
CGCGGGCGATGGGCGAAAAGCAGGAGCGCCATTCCTTCGTCATCGACAGGCCGGGCGGCGTCCCAGCCGTGTCTCGCCAC
ATGTCGACGACGGGCGGCTG

Downstream 100 bases:

>100_bases
CATGGCCAGGGTCCGGCTCGCTCTGGATGCGTTCGAACCGGCGGATGAAATCGCGGCGTTCAATGCGCTGCACCCGGCTG
CGGGCGGGATCGTCACGTTC

Product: sulfur transfer protein ThiS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MARLVFMGRLEDVAGTGELAVEAGPVERILAALDPALAVELLGEKVRMALNGRLLTDMGGVVLGDGDELAFLPPVSGG

Sequences:

>Translated_78_residues
MARLVFMGRLEDVAGTGELAVEAGPVERILAALDPALAVELLGEKVRMALNGRLLTDMGGVVLGDGDELAFLPPVSGG
>Mature_77_residues
ARLVFMGRLEDVAGTGELAVEAGPVERILAALDPALAVELLGEKVRMALNGRLLTDMGGVVLGDGDELAFLPPVSGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8003; Mature: 7871

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLVFMGRLEDVAGTGELAVEAGPVERILAALDPALAVELLGEKVRMALNGRLLTDMGG
CCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECCCCC
VVLGDGDELAFLPPVSGG
EEEECCCCEEEECCCCCC
>Mature Secondary Structure 
ARLVFMGRLEDVAGTGELAVEAGPVERILAALDPALAVELLGEKVRMALNGRLLTDMGG
CEEEEECCCCCCCCCCCEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECCCCC
VVLGDGDELAFLPPVSGG
EEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA