Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is mhpC [C]
Identifier: 87198715
GI number: 87198715
Start: 730917
End: 731789
Strand: Direct
Name: mhpC [C]
Synonym: Saro_0691
Alternate gene names: 87198715
Gene position: 730917-731789 (Clockwise)
Preceding gene: 87198714
Following gene: 87198716
Centisome position: 20.52
GC content: 64.26
Gene sequence:
>873_bases ATGCAGTTACTCGGTCCGACCTCGAACACCTTCATCTCCCAGCGCTTGCGCCTCCACTACGTGGACTGGGGCAATGCCGA CAAGCCGCCGCTCCTGCTGGTGCATGGCGGGCGCGACCATTGCCGTTCGTGGGACTGGACGGCAGAGGCGCTGCGCGAGG ACTGGCACATCATCGCGCTCGACCATCGCGGTCATGGCGATAGCCAGTGGACCCAGGACGGCAACTACCGCACGATGGAC CTCGTCTATGACGTGGCCCAGCTTATCCACCAGCTAGACCTGGCACCGGTGACGATCGTCTCGCACTCGTGGGGCGCCAA CACCAGCCTGCGCTATGCCGGCCTGTTCCCCGAGAACGTGCGCAAGATCGTGGCGATCGAGGGCCTGTTCCCCACGCCCG AGCGCGAGGCTCTGATGAAGGACGTGCCCTTCGCTCGCCGCGTGCGCGAATTCATCGTCGAGAAGCGCAAGGCCGCCGGT CGCCTGCCCCGCCGCTACGCGACGCTGGAAGACGCTTACGCGCGCATGAAGGGTGAAAACCCCTACCTGACCGACGCCCA GGCCCGGCACCTGACGCTCCATGGCATCAACCGCAACGAGGACGGCACCTTCAGTTGGAAGTTCGACCCGCATCTCAATG TCGATGGCGCGCCCTATGACATCAGCACCGACCAGCGCAACGAACTGTGGGGCGCGATCACCTGCCCGACGCTGCTGCTG AACGGCGCGGATTCGTGGGCCGGAAATCCGGACAGGAACGGCATGGCGCAACATTTCCGCAATGCCCAAGTGGTCGAATT CGAGAATGCCGGCCACTGGCTCCACCATGACCAGTTCGACCGGTTCATCGCCACGCTCAGGGATTTCCTCTGA
Upstream 100 bases:
>100_bases CAACCCCGAACTCACCTTCTCTGCGACCAAGGAAAGGTAGTTCCGCCTTAGTCGGCCCGGGGGGTTGAAACCGCAGGGCG AAGGGCGCAGTTAGCCTCCC
Downstream 100 bases:
>100_bases GTGTCGGCGTGAAACTGAAGGTCGCCAGCTACAACATCCACAAGGGCGTCGGGCTTGACCGCCGCCGCGATCCGGACCGC ATCCTGACTGTCCTGCGCGA
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQLLGPTSNTFISQRLRLHYVDWGNADKPPLLLVHGGRDHCRSWDWTAEALREDWHIIALDHRGHGDSQWTQDGNYRTMD LVYDVAQLIHQLDLAPVTIVSHSWGANTSLRYAGLFPENVRKIVAIEGLFPTPEREALMKDVPFARRVREFIVEKRKAAG RLPRRYATLEDAYARMKGENPYLTDAQARHLTLHGINRNEDGTFSWKFDPHLNVDGAPYDISTDQRNELWGAITCPTLLL NGADSWAGNPDRNGMAQHFRNAQVVEFENAGHWLHHDQFDRFIATLRDFL
Sequences:
>Translated_290_residues MQLLGPTSNTFISQRLRLHYVDWGNADKPPLLLVHGGRDHCRSWDWTAEALREDWHIIALDHRGHGDSQWTQDGNYRTMD LVYDVAQLIHQLDLAPVTIVSHSWGANTSLRYAGLFPENVRKIVAIEGLFPTPEREALMKDVPFARRVREFIVEKRKAAG RLPRRYATLEDAYARMKGENPYLTDAQARHLTLHGINRNEDGTFSWKFDPHLNVDGAPYDISTDQRNELWGAITCPTLLL NGADSWAGNPDRNGMAQHFRNAQVVEFENAGHWLHHDQFDRFIATLRDFL >Mature_290_residues MQLLGPTSNTFISQRLRLHYVDWGNADKPPLLLVHGGRDHCRSWDWTAEALREDWHIIALDHRGHGDSQWTQDGNYRTMD LVYDVAQLIHQLDLAPVTIVSHSWGANTSLRYAGLFPENVRKIVAIEGLFPTPEREALMKDVPFARRVREFIVEKRKAAG RLPRRYATLEDAYARMKGENPYLTDAQARHLTLHGINRNEDGTFSWKFDPHLNVDGAPYDISTDQRNELWGAITCPTLLL NGADSWAGNPDRNGMAQHFRNAQVVEFENAGHWLHHDQFDRFIATLRDFL
Specific function: Alkaloid degradation [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI23200008, Length=271, Percent_Identity=27.6752767527675, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI23200012, Length=271, Percent_Identity=27.6752767527675, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI218777840, Length=117, Percent_Identity=31.6239316239316, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI13376164, Length=117, Percent_Identity=31.6239316239316, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI218777837, Length=119, Percent_Identity=31.0924369747899, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17554012, Length=296, Percent_Identity=23.3108108108108, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17562298, Length=112, Percent_Identity=33.9285714285714, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 33342; Mature: 33342
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLGPTSNTFISQRLRLHYVDWGNADKPPLLLVHGGRDHCRSWDWTAEALREDWHIIAL CCCCCCCCHHHHHHCEEEEEEECCCCCCCCEEEEECCHHHHCCCCHHHHHHHCCCEEEEE DHRGHGDSQWTQDGNYRTMDLVYDVAQLIHQLDLAPVTIVSHSWGANTSLRYAGLFPENV ECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHC RKIVAIEGLFPTPEREALMKDVPFARRVREFIVEKRKAAGRLPRRYATLEDAYARMKGEN EEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC PYLTDAQARHLTLHGINRNEDGTFSWKFDPHLNVDGAPYDISTDQRNELWGAITCPTLLL CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEECHHHEE NGADSWAGNPDRNGMAQHFRNAQVVEFENAGHWLHHDQFDRFIATLRDFL CCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MQLLGPTSNTFISQRLRLHYVDWGNADKPPLLLVHGGRDHCRSWDWTAEALREDWHIIAL CCCCCCCCHHHHHHCEEEEEEECCCCCCCCEEEEECCHHHHCCCCHHHHHHHCCCEEEEE DHRGHGDSQWTQDGNYRTMDLVYDVAQLIHQLDLAPVTIVSHSWGANTSLRYAGLFPENV ECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCHHHC RKIVAIEGLFPTPEREALMKDVPFARRVREFIVEKRKAAGRLPRRYATLEDAYARMKGEN EEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC PYLTDAQARHLTLHGINRNEDGTFSWKFDPHLNVDGAPYDISTDQRNELWGAITCPTLLL CCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEECHHHEE NGADSWAGNPDRNGMAQHFRNAQVVEFENAGHWLHHDQFDRFIATLRDFL CCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA