Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is metA
Identifier: 87198708
GI number: 87198708
Start: 723040
End: 723945
Strand: Direct
Name: metA
Synonym: Saro_0684
Alternate gene names: 87198708
Gene position: 723040-723945 (Clockwise)
Preceding gene: 87198707
Following gene: 87198709
Centisome position: 20.3
GC content: 63.69
Gene sequence:
>906_bases GTGCCGATCAGGATTGCCGACAATCTCCCCGCCCGCCGCACGCTGGAAGCCGAGGGCGTGATCGTGATGAGCGAGACCGA GGCCGCACGCCAGGACATCCGGCCGATGCGCATCGCCCTTCTCAACCTGATGCCCGACAAGATCACCACCGAAACGCAGA TCGCCCGTCTTCTCGGCGCGACGCCGCTGCAGGTGGATCTCGAACTGGTCCGCATTTCCGACCACGTCAGCAAGAACACC TCGGCGGGGCACATCTCGGCCTTCTACCGTCCGTGGGATGACGTCCGCGCCGAGAAGTATGACGGCCTGATCGTCACCGG CGCGCCGGTCGAGACGATCCCATACGAGGAAGTGAGCTACTGGGACGAGTTGCGGCGCATTTTCGACTGGTCGCAGAGCA ACGTTCACCGCACTCTGTCGGTCTGCTGGGGCGCCATGGCTGCGCTCTATCACTTCCATGGCATCGAAAAGCACGGCCTG CCGACCAAGGCGTCCGGCGTGTTCCGTCATGTCAATCATGCCCCCGCGAGCCCGTGGATGCGGGGTTTGCCCGACGTGTT CGACGTGCCCGTCTCGCGCTGGAGCGAGGTCCGCCGCGAGGACCTGCCCGAAGGGCGGGGCTTGTCGGTGCTGGCCGACA GCGCCGAGACCGGGCTGTGCCTGATTGACGATCCGGCCATGCGCACGCTGCATATGTTCAACCATCTCGAGTACGACACG CTCACCCTTGCAGGCGAATATGCGCGGGATGAAGGCAAGTATCTTCCGCGCAACTATTTCCCCGGCGATGACCCGCAGGC GATGCCTGCCAACACGTGGCGTGGCCACGGGCACCTGCTGTACGGCAACTGGATCAACGAGACGTATCAGACGACGCCAT ACGATCTCGCAGACATTGGAAGGTAA
Upstream 100 bases:
>100_bases CCCCGGCCGAATTGCGAAAGGGGATGTGGCCGATCCGGCAACCAAACGGACACGGACACCTTGCAGCGTCTTCCCCACCA GATTGCAGGAAGACGCAGAA
Downstream 100 bases:
>100_bases CCGAACGGGGGGAACATAAGGGGCCGGGCCGGAGCGACACCTCCGACAAGGACTCTCTTCCCTTGCCTTTCCGCGCCGCT TCGCCTAACGGCCCCACCTT
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPIRIADNLPARRTLEAEGVIVMSETEAARQDIRPMRIALLNLMPDKITTETQIARLLGATPLQVDLELVRISDHVSKNT SAGHISAFYRPWDDVRAEKYDGLIVTGAPVETIPYEEVSYWDELRRIFDWSQSNVHRTLSVCWGAMAALYHFHGIEKHGL PTKASGVFRHVNHAPASPWMRGLPDVFDVPVSRWSEVRREDLPEGRGLSVLADSAETGLCLIDDPAMRTLHMFNHLEYDT LTLAGEYARDEGKYLPRNYFPGDDPQAMPANTWRGHGHLLYGNWINETYQTTPYDLADIGR
Sequences:
>Translated_301_residues MPIRIADNLPARRTLEAEGVIVMSETEAARQDIRPMRIALLNLMPDKITTETQIARLLGATPLQVDLELVRISDHVSKNT SAGHISAFYRPWDDVRAEKYDGLIVTGAPVETIPYEEVSYWDELRRIFDWSQSNVHRTLSVCWGAMAALYHFHGIEKHGL PTKASGVFRHVNHAPASPWMRGLPDVFDVPVSRWSEVRREDLPEGRGLSVLADSAETGLCLIDDPAMRTLHMFNHLEYDT LTLAGEYARDEGKYLPRNYFPGDDPQAMPANTWRGHGHLLYGNWINETYQTTPYDLADIGR >Mature_300_residues PIRIADNLPARRTLEAEGVIVMSETEAARQDIRPMRIALLNLMPDKITTETQIARLLGATPLQVDLELVRISDHVSKNTS AGHISAFYRPWDDVRAEKYDGLIVTGAPVETIPYEEVSYWDELRRIFDWSQSNVHRTLSVCWGAMAALYHFHGIEKHGLP TKASGVFRHVNHAPASPWMRGLPDVFDVPVSRWSEVRREDLPEGRGLSVLADSAETGLCLIDDPAMRTLHMFNHLEYDTL TLAGEYARDEGKYLPRNYFPGDDPQAMPANTWRGHGHLLYGNWINETYQTTPYDLADIGR
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=301, Percent_Identity=42.5249169435216, Blast_Score=248, Evalue=4e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_NOVAD (Q2GAJ2)
Other databases:
- EMBL: CP000248 - RefSeq: YP_495965.1 - HSSP: Q72X44 - ProteinModelPortal: Q2GAJ2 - SMR: Q2GAJ2 - STRING: Q2GAJ2 - GeneID: 3918109 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_0684 - NMPDR: fig|48935.1.peg.1923 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - PhylomeDB: Q2GAJ2 - ProtClustDB: PRK05368 - BioCyc: NARO279238:SARO_0684-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 34106; Mature: 33975
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRIADNLPARRTLEAEGVIVMSETEAARQDIRPMRIALLNLMPDKITTETQIARLLGA CCEEECCCCCCCCEECCCCEEEEECCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC TPLQVDLELVRISDHVSKNTSAGHISAFYRPWDDVRAEKYDGLIVTGAPVETIPYEEVSY CCCEEEEEEEEEHHHHCCCCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCHHHHH WDELRRIFDWSQSNVHRTLSVCWGAMAALYHFHGIEKHGLPTKASGVFRHVNHAPASPWM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCCCCHH RGLPDVFDVPVSRWSEVRREDLPEGRGLSVLADSAETGLCLIDDPAMRTLHMFNHLEYDT HCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCE LTLAGEYARDEGKYLPRNYFPGDDPQAMPANTWRGHGHLLYGNWINETYQTTPYDLADIG EEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCC R C >Mature Secondary Structure PIRIADNLPARRTLEAEGVIVMSETEAARQDIRPMRIALLNLMPDKITTETQIARLLGA CEEECCCCCCCCEECCCCEEEEECCHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC TPLQVDLELVRISDHVSKNTSAGHISAFYRPWDDVRAEKYDGLIVTGAPVETIPYEEVSY CCCEEEEEEEEEHHHHCCCCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCHHHHH WDELRRIFDWSQSNVHRTLSVCWGAMAALYHFHGIEKHGLPTKASGVFRHVNHAPASPWM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHCCCCCCCHH RGLPDVFDVPVSRWSEVRREDLPEGRGLSVLADSAETGLCLIDDPAMRTLHMFNHLEYDT HCCCHHHHCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHCCCCCE LTLAGEYARDEGKYLPRNYFPGDDPQAMPANTWRGHGHLLYGNWINETYQTTPYDLADIG EEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA