Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198677
Identifier: 87198677
GI number: 87198677
Start: 691102
End: 691452
Strand: Direct
Name: 87198677
Synonym: Saro_0653
Alternate gene names: NA
Gene position: 691102-691452 (Clockwise)
Preceding gene: 87198676
Following gene: 87198678
Centisome position: 19.4
GC content: 62.39
Gene sequence:
>351_bases ATGGCCGAGTTCGACCCAGGCCGGTTCAAGGATCGGATCACCATCCTCCAACCCGGGCGTGCCCAGCAGGGCAAGTATGG AACCCATGCTGTCGCCTGGACCGAGATGGTCACAGTGTGGGGCGAAGTTCGGGACATGCTGCCAAGTCGTGCGGAGCGCA TCGCTGAAGGGCTCGAGATTTCCCGCCGCCCCTGCCGGGTTCGAATTCGGCATCGTGGCGATGTTCGGACTGACATGCGC CTGCGCTTTCTCGGCCGGACCTTGCGCATTGTGGCAATTGCCGAGGTGGGCCGGCGTGAAGTGCTCGAGATTGCGGCAGA AGAATTGTCGACGGAAGGGCAGGATTCGTGA
Upstream 100 bases:
>100_bases TCATGGCGACTGTGGCGCAGTGGTACGATAATCGCATTCCTGGGGCACTCCCGGCGGGCGTCACGGCAATGCTGCAGCCT ATGCGCAGGATGGTGCTCTG
Downstream 100 bases:
>100_bases GCCGTAACATCGGATTGAAAGGTGGGCCGGAACTCATGGCTTTCCTGGAAGCCTTCCCCGCGAGACTGCAGAAAAACGCG CTGAAGTCGGCCATGATCGC
Product: Phage head-tail adaptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAEFDPGRFKDRITILQPGRAQQGKYGTHAVAWTEMVTVWGEVRDMLPSRAERIAEGLEISRRPCRVRIRHRGDVRTDMR LRFLGRTLRIVAIAEVGRREVLEIAAEELSTEGQDS
Sequences:
>Translated_116_residues MAEFDPGRFKDRITILQPGRAQQGKYGTHAVAWTEMVTVWGEVRDMLPSRAERIAEGLEISRRPCRVRIRHRGDVRTDMR LRFLGRTLRIVAIAEVGRREVLEIAAEELSTEGQDS >Mature_115_residues AEFDPGRFKDRITILQPGRAQQGKYGTHAVAWTEMVTVWGEVRDMLPSRAERIAEGLEISRRPCRVRIRHRGDVRTDMRL RFLGRTLRIVAIAEVGRREVLEIAAEELSTEGQDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13303; Mature: 13171
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFDPGRFKDRITILQPGRAQQGKYGTHAVAWTEMVTVWGEVRDMLPSRAERIAEGLEI CCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRRPCRVRIRHRGDVRTDMRLRFLGRTLRIVAIAEVGRREVLEIAAEELSTEGQDS CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEFDPGRFKDRITILQPGRAQQGKYGTHAVAWTEMVTVWGEVRDMLPSRAERIAEGLEI CCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRRPCRVRIRHRGDVRTDMRLRFLGRTLRIVAIAEVGRREVLEIAAEELSTEGQDS CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA