Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198613
Identifier: 87198613
GI number: 87198613
Start: 634798
End: 635496
Strand: Direct
Name: 87198613
Synonym: Saro_0589
Alternate gene names: NA
Gene position: 634798-635496 (Clockwise)
Preceding gene: 87198612
Following gene: 87198616
Centisome position: 17.82
GC content: 63.81
Gene sequence:
>699_bases ATGAAGTCTCTTTTGCAGAACAAGCGTCGTCGTCTTGTCGGCATGGTCGCGGTTCCGCTGATGCTGGCCGCGCTCGGCGG CTGCGCATCGCCCTTCAATGCCAACGTGAAGCGTTTCCAGACCCAGCTTCCCGCGCCGCAGGGCCAGACCTTCGCGGTCG TGGCCGAGGATCCCAAGGATGCCGGCGGTCTCGAGTTCTCGCAATACGCCTCGCTGGTCGCGGGGCAGATGCAGAAGCTC GGCTACAGCCCGGCCAGCCCCGAGAGCGCCGACCTGATCGTGCGCTTCGACTATGGCGTGGACCAGGGCCGTGACCGCCT GCGCGAGACGGGCTTCAACGATCCGTTCTGGGGGCCGTGGTACGGTCCCGGATACAACGGTTACTGGGGTCGCCCGGCAT TCTACGGCCGTCGCGGCTGGGGCTATGGATGGTACGATCCGTTCTTCTGGGGCCCGGGCAACAGCGGGGTCGAGGTGACC ACCGTCTACACCAGCGGGATCGACATGAAGATCGACCGCCGCGTCGATGGCCAGCGCCTGTTCGAGGGCAAGGCCGAGGC GGCTTCTCAGTCGAACCGGCTGTCCTACCTGGTGCCGAACCTTGTCGAGGCGATGTTTACCGATTTCCCCGGGCACAACG GTGAAACCGTAAGGATTTCAATCGCTCCCGAGAAGAAGACGGTCAAGAAGGTCAATTGA
Upstream 100 bases:
>100_bases CAGCACCTCCCGTCCATAAGTACGGCATGCTAAGCACAGGTCGCGTCCGGTACGTTCATGGGAACGAGGTGCGGCGGACT GCGCCCAAGGAGTCGCAAGG
Downstream 100 bases:
>100_bases CCCGAACGGCACCTGAAAGCACCTGAACATACACGAAGGGGCCCGGCGGCGACGCGGGGCCCCTTTTTTCAGCCCTTGAG AGCCGCGAGGCCGCCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKSLLQNKRRRLVGMVAVPLMLAALGGCASPFNANVKRFQTQLPAPQGQTFAVVAEDPKDAGGLEFSQYASLVAGQMQKL GYSPASPESADLIVRFDYGVDQGRDRLRETGFNDPFWGPWYGPGYNGYWGRPAFYGRRGWGYGWYDPFFWGPGNSGVEVT TVYTSGIDMKIDRRVDGQRLFEGKAEAASQSNRLSYLVPNLVEAMFTDFPGHNGETVRISIAPEKKTVKKVN
Sequences:
>Translated_232_residues MKSLLQNKRRRLVGMVAVPLMLAALGGCASPFNANVKRFQTQLPAPQGQTFAVVAEDPKDAGGLEFSQYASLVAGQMQKL GYSPASPESADLIVRFDYGVDQGRDRLRETGFNDPFWGPWYGPGYNGYWGRPAFYGRRGWGYGWYDPFFWGPGNSGVEVT TVYTSGIDMKIDRRVDGQRLFEGKAEAASQSNRLSYLVPNLVEAMFTDFPGHNGETVRISIAPEKKTVKKVN >Mature_232_residues MKSLLQNKRRRLVGMVAVPLMLAALGGCASPFNANVKRFQTQLPAPQGQTFAVVAEDPKDAGGLEFSQYASLVAGQMQKL GYSPASPESADLIVRFDYGVDQGRDRLRETGFNDPFWGPWYGPGYNGYWGRPAFYGRRGWGYGWYDPFFWGPGNSGVEVT TVYTSGIDMKIDRRVDGQRLFEGKAEAASQSNRLSYLVPNLVEAMFTDFPGHNGETVRISIAPEKKTVKKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25707; Mature: 25707
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLQNKRRRLVGMVAVPLMLAALGGCASPFNANVKRFQTQLPAPQGQTFAVVAEDPKD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCC AGGLEFSQYASLVAGQMQKLGYSPASPESADLIVRFDYGVDQGRDRLRETGFNDPFWGPW CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC YGPGYNGYWGRPAFYGRRGWGYGWYDPFFWGPGNSGVEVTTVYTSGIDMKIDRRVDGQRL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCEEECCCCCCHHH FEGKAEAASQSNRLSYLVPNLVEAMFTDFPGHNGETVRISIAPEKKTVKKVN HCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCC >Mature Secondary Structure MKSLLQNKRRRLVGMVAVPLMLAALGGCASPFNANVKRFQTQLPAPQGQTFAVVAEDPKD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCC AGGLEFSQYASLVAGQMQKLGYSPASPESADLIVRFDYGVDQGRDRLRETGFNDPFWGPW CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC YGPGYNGYWGRPAFYGRRGWGYGWYDPFFWGPGNSGVEVTTVYTSGIDMKIDRRVDGQRL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCEEECCCCCCHHH FEGKAEAASQSNRLSYLVPNLVEAMFTDFPGHNGETVRISIAPEKKTVKKVN HCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA