Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yfcF [C]

Identifier: 87198604

GI number: 87198604

Start: 626906

End: 627580

Strand: Direct

Name: yfcF [C]

Synonym: Saro_0580

Alternate gene names: 87198604

Gene position: 626906-627580 (Clockwise)

Preceding gene: 87198603

Following gene: 87198605

Centisome position: 17.6

GC content: 66.22

Gene sequence:

>675_bases
ATGAAGCTGATCATCGGCAACAAGAACTACTCCAGCTGGTCCTTGCGCGGCTGGCTGGCTGCCAAGCAATCGGGCCTCCA
CTTCGAGGAAATCACCGTCCCGCTCTATGGCGAGGACTGGGACGAGGCCCGCCGTGCCGACGATCTCGCTCCGTCCTCGG
GCAAGGTGCCGATCCTGTGGGACGGCGAAGGCCCAGACGCTCCCGTCGTGTGGGACAGCCTCGCGATCATCGACTACCTC
GCCGACAAGGTCGGGCGCGACCGCTTCTGGCCCAAGGACGAGACCGCGCGCGCCATGGCTCGCTCGATGGTCGCGGAAAT
GCATTCCAGCTACCTGCCGCTGCGCCGCAACCTGCCGATGAACATCCGCAAGCGTGTCGAAGCCATCGAGATCAAGCCCG
AGGTCCGCGCCGACATCGTGCGCATCCTCTCGCTCTGGGCCGAGGCGCGCGCGCGCTTCGGCAAGGGCGGGCCGTTCCTG
TTCGGCACCTTCTGCGCCGCCGACATCATCTACGCCCCGGTCGTCTCGCGCTTCATGACCTATGGCGTGCCCGTCCCCGG
CTTCGCCATGACCTATATGGAAGCGGTCTGGACCCACGACTGGATGCAGGCCTGGATCGAGGCGGCCGAGCACGAGGACT
GGACGATCGAACAGTTCGAGGAGCCCGCGCGCTGA

Upstream 100 bases:

>100_bases
GTTAACTTCCCTGGACACTGTAAACTGCGTAAACCTGTTCATGCTCGACAGCAGCAACCTGAACGGCTACGCGCCCCGGA
GGCGTAACAGGGCGAATGCG

Downstream 100 bases:

>100_bases
TGACCGACCTTGATCCCGTCGTCCTGGCCGAACGGCTGATCGACTGCCCCAGCATCACGCCGGCCACCGGCGCGGTTTTC
GATTGCCTCCAGGCCATGCT

Product: glutathione S-transferase-like protein

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL
ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL
FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR

Sequences:

>Translated_224_residues
MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL
ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL
FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR
>Mature_224_residues
MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL
ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL
FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25607; Mature: 25607

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILW
CEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCCEEEEE
DGEGPDAPVVWDSLAIIDYLADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPM
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCH
NIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFLFGTFCAADIIYAPVVSRFMT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILW
CEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCCEEEEE
DGEGPDAPVVWDSLAIIDYLADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPM
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCH
NIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFLFGTFCAADIIYAPVVSRFMT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA