Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yfcF [C]
Identifier: 87198604
GI number: 87198604
Start: 626906
End: 627580
Strand: Direct
Name: yfcF [C]
Synonym: Saro_0580
Alternate gene names: 87198604
Gene position: 626906-627580 (Clockwise)
Preceding gene: 87198603
Following gene: 87198605
Centisome position: 17.6
GC content: 66.22
Gene sequence:
>675_bases ATGAAGCTGATCATCGGCAACAAGAACTACTCCAGCTGGTCCTTGCGCGGCTGGCTGGCTGCCAAGCAATCGGGCCTCCA CTTCGAGGAAATCACCGTCCCGCTCTATGGCGAGGACTGGGACGAGGCCCGCCGTGCCGACGATCTCGCTCCGTCCTCGG GCAAGGTGCCGATCCTGTGGGACGGCGAAGGCCCAGACGCTCCCGTCGTGTGGGACAGCCTCGCGATCATCGACTACCTC GCCGACAAGGTCGGGCGCGACCGCTTCTGGCCCAAGGACGAGACCGCGCGCGCCATGGCTCGCTCGATGGTCGCGGAAAT GCATTCCAGCTACCTGCCGCTGCGCCGCAACCTGCCGATGAACATCCGCAAGCGTGTCGAAGCCATCGAGATCAAGCCCG AGGTCCGCGCCGACATCGTGCGCATCCTCTCGCTCTGGGCCGAGGCGCGCGCGCGCTTCGGCAAGGGCGGGCCGTTCCTG TTCGGCACCTTCTGCGCCGCCGACATCATCTACGCCCCGGTCGTCTCGCGCTTCATGACCTATGGCGTGCCCGTCCCCGG CTTCGCCATGACCTATATGGAAGCGGTCTGGACCCACGACTGGATGCAGGCCTGGATCGAGGCGGCCGAGCACGAGGACT GGACGATCGAACAGTTCGAGGAGCCCGCGCGCTGA
Upstream 100 bases:
>100_bases GTTAACTTCCCTGGACACTGTAAACTGCGTAAACCTGTTCATGCTCGACAGCAGCAACCTGAACGGCTACGCGCCCCGGA GGCGTAACAGGGCGAATGCG
Downstream 100 bases:
>100_bases TGACCGACCTTGATCCCGTCGTCCTGGCCGAACGGCTGATCGACTGCCCCAGCATCACGCCGGCCACCGGCGCGGTTTTC GATTGCCTCCAGGCCATGCT
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR
Sequences:
>Translated_224_residues MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR >Mature_224_residues MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILWDGEGPDAPVVWDSLAIIDYL ADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPMNIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFL FGTFCAADIIYAPVVSRFMTYGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25607; Mature: 25607
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILW CEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCCEEEEE DGEGPDAPVVWDSLAIIDYLADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPM CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCH NIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFLFGTFCAADIIYAPVVSRFMT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure MKLIIGNKNYSSWSLRGWLAAKQSGLHFEEITVPLYGEDWDEARRADDLAPSSGKVPILW CEEEECCCCCCCCCHHHHHHHHHCCCCHHHEEEECCCCCHHHHHHHHCCCCCCCCEEEEE DGEGPDAPVVWDSLAIIDYLADKVGRDRFWPKDETARAMARSMVAEMHSSYLPLRRNLPM CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCH NIRKRVEAIEIKPEVRADIVRILSLWAEARARFGKGGPFLFGTFCAADIIYAPVVSRFMT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH YGVPVPGFAMTYMEAVWTHDWMQAWIEAAEHEDWTIEQFEEPAR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA