Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198587
Identifier: 87198587
GI number: 87198587
Start: 611833
End: 612276
Strand: Direct
Name: 87198587
Synonym: Saro_0563
Alternate gene names: NA
Gene position: 611833-612276 (Clockwise)
Preceding gene: 87198583
Following gene: 87198593
Centisome position: 17.18
GC content: 65.99
Gene sequence:
>444_bases ATGGCCATCTTCACCGACAACCCCAAGTTCGACTGGATCCTCAGGTGCGGCTGGAAGGGGCTTTGCCCGCGCTGCGGCAA GGGGCCGATGTTCCGGGGCTGGCTGAAGCTGCAGAAGACCTGCCCCGAATGCGGGCTCGACTACGATTTCGCCAATGCCG ACGATGGCCCGGCCTTCTTCGCGCTGTGCATCACCGCCTTCCCGCTGACCTTCATCGCGGTCTGGCTGGAAGTGGCCTAC GCGCCGCCGTGGTGGGTCCACGTGCTGACCTCGGTGCCGATCCTTGCCATCGGCTGCCTTGCCACGCTGCGCCCGTTCAA GGGCTGGCTGGTCGCCTCGCAATACGTGAACAAGGCGGTCGAGGCCGGGACCGAGAACCTGTGGGCCAAGCTCAACGCCC GCGAAAAGGATGGCGCGAACGGTCCGGGCCCTTCCGAGAGCTGA
Upstream 100 bases:
>100_bases ATCGCACATCTGCGACTTTCGTTCCACCGCGCCCGTTAAGGCTTGCCTTGCGCCGGTGGCGGCATATGGGACGAAGGCAG TCTTTACAGGAACATGCCGC
Downstream 100 bases:
>100_bases TCAGCGCTTGCGGAAGTCGGCGACGATCTCGCCGCATTCCGCCAGTTCGGCCTCGTGGCCTTCCTCGCGCCAGCTTTCTT CCAGCGCCTCGGCCTCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAIFTDNPKFDWILRCGWKGLCPRCGKGPMFRGWLKLQKTCPECGLDYDFANADDGPAFFALCITAFPLTFIAVWLEVAY APPWWVHVLTSVPILAIGCLATLRPFKGWLVASQYVNKAVEAGTENLWAKLNAREKDGANGPGPSES
Sequences:
>Translated_147_residues MAIFTDNPKFDWILRCGWKGLCPRCGKGPMFRGWLKLQKTCPECGLDYDFANADDGPAFFALCITAFPLTFIAVWLEVAY APPWWVHVLTSVPILAIGCLATLRPFKGWLVASQYVNKAVEAGTENLWAKLNAREKDGANGPGPSES >Mature_146_residues AIFTDNPKFDWILRCGWKGLCPRCGKGPMFRGWLKLQKTCPECGLDYDFANADDGPAFFALCITAFPLTFIAVWLEVAYA PPWWVHVLTSVPILAIGCLATLRPFKGWLVASQYVNKAVEAGTENLWAKLNAREKDGANGPGPSES
Specific function: Unknown
COG id: COG5349
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16240; Mature: 16109
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFTDNPKFDWILRCGWKGLCPRCGKGPMFRGWLKLQKTCPECGLDYDFANADDGPAFF CCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCHHHH ALCITAFPLTFIAVWLEVAYAPPWWVHVLTSVPILAIGCLATLRPFKGWLVASQYVNKAV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGTENLWAKLNAREKDGANGPGPSES HHCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIFTDNPKFDWILRCGWKGLCPRCGKGPMFRGWLKLQKTCPECGLDYDFANADDGPAFF CEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHCCCCCCCCCCCCCHHHH ALCITAFPLTFIAVWLEVAYAPPWWVHVLTSVPILAIGCLATLRPFKGWLVASQYVNKAV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGTENLWAKLNAREKDGANGPGPSES HHCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA