Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is galT [H]
Identifier: 87198567
GI number: 87198567
Start: 592634
End: 593659
Strand: Direct
Name: galT [H]
Synonym: Saro_0543
Alternate gene names: 87198567
Gene position: 592634-593659 (Clockwise)
Preceding gene: 87198566
Following gene: 87198568
Centisome position: 16.64
GC content: 66.28
Gene sequence:
>1026_bases ATGACCCGTTTTTCAACAGACGATCACCCGCATCGTCGCCAGAACCTGCTTACGGGAAAGTGGGTCCTTGTCTCGCCGCA CCGCGCCAAGCGGCCGTGGCAGGGCGAGACTGGCGATCCCGCGCCAACGGGAGGACCGTCTCACGATCCCGGCTGCTATC TCTGCCCCGGAAACGCCCGGACAAGCGGTGAGCGCAACCCGGACTATCCCGGCGCCTTCGCCTTCGACAACGATTTCCCC GCCCTCATGCCCGACAATCCCGCGCCCGAAGGCGGCGATCCTGTCTTCCGCGTGGCCGAAGCGCGCGGGACCGCTCGGGT CATCTGCTATTCTCCCGATCACTCGAAGACGATGCCCGACATGGATGTCGCGGCCATCCGCAGTCTGGTCAATTGCTGGG CACAGGAAAGCGAGACGCTCGGTGCGCATTTTGCCAATGTCCAGATCTTCGAGAACAAGGGCGCGATGATGGGCTGTTCC AGCCCGCACCCGCATGGCCAGATCTGGGCCAGCGACTTCATCCCGACCGAAGTGGCGGACGAGGACCGGGAACAGGCAGC GTGGCACGCCTCGCGCGGGCGCGTGCTGCTTGACGAAGTCGCCGAACGCGAACTCGCCTCGGGCGAACGCGTGGTCGAGG CGAACGAGCACTGGCTCGCGGTCGTGCCCTGGTGGGCGACATGGCCCTTCGAGATATTGCTGGTCGCGCGCGACGGCGTT GGCCGGATCGAGGAGCTTTCGGATGCCTCGCGTGATGCCCTCGCGTCCATCCTGCGTGCTGTCACGCGCCGCTACGACGC GTTGTTCAACGCCAGTTTTCCCTATTCCATGGGCTGGCACCAGCGCCCGGCGGGCAGCTCCGATCCCGCTGCCTGGCGGC TTCATGCCCATTTCAACCCGCCGCTGCTGCGCTCGGCCACGGTGCGCAAGTTCATGGTCGGCTTCGAGATGTTCGGCGAA AGCCAGCGCGACATCACCCCGGAGACCGCCGCCGCGCGTCTGCGCGCGCTGGAGATCGACGCGTGA
Upstream 100 bases:
>100_bases CAATGCCCTGACGGCGTGAATTCGAATTACCTGTGCGGCGCGGCGAGCTTGGTGCTAACCTTCGGCAATCGATTGCAATA AGCCGTATCCGGAGAGGCTG
Downstream 100 bases:
>100_bases CCGCGCTGCATGACCGGCTCCTTGCCGGCTTTGCGCAAGCGTTCGGGGGAGAGCCGGAGCTTGTCGTGCGCGCGCCCGGC CGGGTGAACCTGATCGGCGA
Product: galactose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTRFSTDDHPHRRQNLLTGKWVLVSPHRAKRPWQGETGDPAPTGGPSHDPGCYLCPGNARTSGERNPDYPGAFAFDNDFP ALMPDNPAPEGGDPVFRVAEARGTARVICYSPDHSKTMPDMDVAAIRSLVNCWAQESETLGAHFANVQIFENKGAMMGCS SPHPHGQIWASDFIPTEVADEDREQAAWHASRGRVLLDEVAERELASGERVVEANEHWLAVVPWWATWPFEILLVARDGV GRIEELSDASRDALASILRAVTRRYDALFNASFPYSMGWHQRPAGSSDPAAWRLHAHFNPPLLRSATVRKFMVGFEMFGE SQRDITPETAAARLRALEIDA
Sequences:
>Translated_341_residues MTRFSTDDHPHRRQNLLTGKWVLVSPHRAKRPWQGETGDPAPTGGPSHDPGCYLCPGNARTSGERNPDYPGAFAFDNDFP ALMPDNPAPEGGDPVFRVAEARGTARVICYSPDHSKTMPDMDVAAIRSLVNCWAQESETLGAHFANVQIFENKGAMMGCS SPHPHGQIWASDFIPTEVADEDREQAAWHASRGRVLLDEVAERELASGERVVEANEHWLAVVPWWATWPFEILLVARDGV GRIEELSDASRDALASILRAVTRRYDALFNASFPYSMGWHQRPAGSSDPAAWRLHAHFNPPLLRSATVRKFMVGFEMFGE SQRDITPETAAARLRALEIDA >Mature_340_residues TRFSTDDHPHRRQNLLTGKWVLVSPHRAKRPWQGETGDPAPTGGPSHDPGCYLCPGNARTSGERNPDYPGAFAFDNDFPA LMPDNPAPEGGDPVFRVAEARGTARVICYSPDHSKTMPDMDVAAIRSLVNCWAQESETLGAHFANVQIFENKGAMMGCSS PHPHGQIWASDFIPTEVADEDREQAAWHASRGRVLLDEVAERELASGERVVEANEHWLAVVPWWATWPFEILLVARDGVG RIEELSDASRDALASILRAVTRRYDALFNASFPYSMGWHQRPAGSSDPAAWRLHAHFNPPLLRSATVRKFMVGFEMFGES QRDITPETAAARLRALEIDA
Specific function: Galactose metabolism; second step. [C]
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI22165416, Length=338, Percent_Identity=54.1420118343195, Blast_Score=371, Evalue=1e-103, Organism=Escherichia coli, GI1786973, Length=338, Percent_Identity=58.2840236686391, Blast_Score=422, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17557105, Length=341, Percent_Identity=40.7624633431085, Blast_Score=277, Evalue=6e-75, Organism=Saccharomyces cerevisiae, GI6319492, Length=353, Percent_Identity=43.6260623229462, Blast_Score=309, Evalue=4e-85, Organism=Drosophila melanogaster, GI24582285, Length=341, Percent_Identity=48.0938416422287, Blast_Score=341, Evalue=4e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001937 - InterPro: IPR019779 - InterPro: IPR005850 - InterPro: IPR005849 - InterPro: IPR011146 - InterPro: IPR011151 [H]
Pfam domain/function: PF02744 GalP_UDP_tr_C; PF01087 GalP_UDP_transf [H]
EC number: =2.7.7.12 [H]
Molecular weight: Translated: 37818; Mature: 37686
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00117 GAL_P_UDP_TRANSF_I ; PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFSTDDHPHRRQNLLTGKWVLVSPHRAKRPWQGETGDPAPTGGPSHDPGCYLCPGNAR CCCCCCCCCCHHHHHCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC TSGERNPDYPGAFAFDNDFPALMPDNPAPEGGDPVFRVAEARGTARVICYSPDHSKTMPD CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCC MDVAAIRSLVNCWAQESETLGAHFANVQIFENKGAMMGCSSPHPHGQIWASDFIPTEVAD HHHHHHHHHHHHHHHCCHHHCCEEEEEEEECCCCCEEECCCCCCCCCEEECCCCCCCCCC EDREQAAWHASRGRVLLDEVAERELASGERVVEANEHWLAVVPWWATWPFEILLVARDGV CHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCC GRIEELSDASRDALASILRAVTRRYDALFNASFPYSMGWHQRPAGSSDPAAWRLHAHFNP CHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC PLLRSATVRKFMVGFEMFGESQRDITPETAAARLRALEIDA CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECC >Mature Secondary Structure TRFSTDDHPHRRQNLLTGKWVLVSPHRAKRPWQGETGDPAPTGGPSHDPGCYLCPGNAR CCCCCCCCCHHHHHCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC TSGERNPDYPGAFAFDNDFPALMPDNPAPEGGDPVFRVAEARGTARVICYSPDHSKTMPD CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCC MDVAAIRSLVNCWAQESETLGAHFANVQIFENKGAMMGCSSPHPHGQIWASDFIPTEVAD HHHHHHHHHHHHHHHCCHHHCCEEEEEEEECCCCCEEECCCCCCCCCEEECCCCCCCCCC EDREQAAWHASRGRVLLDEVAERELASGERVVEANEHWLAVVPWWATWPFEILLVARDGV CHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCEEEEEEECCCC GRIEELSDASRDALASILRAVTRRYDALFNASFPYSMGWHQRPAGSSDPAAWRLHAHFNP CHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC PLLRSATVRKFMVGFEMFGESQRDITPETAAARLRALEIDA CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3022232; 8905232; 9278503; 3158881; 2823224; 321007; 8794735; 10820011; 7669762; 9063869 [H]