Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is bglA [H]
Identifier: 87198566
GI number: 87198566
Start: 591233
End: 592552
Strand: Direct
Name: bglA [H]
Synonym: Saro_0542
Alternate gene names: 87198566
Gene position: 591233-592552 (Clockwise)
Preceding gene: 87198565
Following gene: 87198567
Centisome position: 16.6
GC content: 64.92
Gene sequence:
>1320_bases ATGATCGATCGTCGTTCCGTACTCGCCGGGAGCGTTGCCCTTGCCGCGACTCCCGCTCTTGCCGGAGTGAAAACCCGGAG ACATCCCGATCCGGTGTTTCCGAAAGGTTTCCTCTGGGGCGCGTCGACCGCTCCGCACCAGATCGAGGGCAACAACACCG CGTCCGATCTGTGGTTTCTGGAAAACCAGCAGCCGACCGTCTTTGCCGAGCCATCCGGCGATGCTGCCAACAGCCTGTTG CTGTGGGAGCGCGATCTGGACCTGGCGCGCGATATCGGCCTCAACACCTATCGGTTCGGCGTCGAGTGGGCGCGGATCGA GCCGGAGAAGGGCCGCTTCAGCCAGGCGATGCTCGACCATTACCGCCGTGTCGTAGATGGATGCCGCGCGCGCGGGCTGG TCCCCATCGTCACCTACAGCCATTTCACCGCTCCGCGCTGGTTCAGCGCGCAGGGCGGGTGGACCAATCCCGAAAGCGCG GAACTGTTCGCGCGCTATTGCACGAAGGTCACCCAGGCCATCGGCGATGCGATCCATTCCGCGATCACGCTGAACGAGCC GAACATCCTGCTGATCCTCAAGCCCATGCTGCCGCAGGCGGTGTGGGATATCCAGAAGCTGACGCTCGAGACGGCGGGCA GGCGTCTTGGCGTCGAAAAGTTCGTCTGCGCCAATGTCGCCGCGTTCGAGGATCTGCCGGCGCTGCAGCATGGACTGCTG GCCGCACACAAGGCAGGCCGCGCCGCAATCAAGGCGGTACGTCCCGCTTTGCCCGTCGGCGTATCCATCGCCATGCTCGA CGACCAGGCCGTCGGTCGCAATTCGATCCGTGACCGCATTCGCAGCGAACTCTACGGCGCGTGGCTGGACGTCGCGAAGG CGGACGATTTCATCGGCGTTCAGAACTACGAGCGCGCGCTGTGGGGTGACAAGGGGCGGTTGCCGGCGCCCCAGGACGCC CCCCGCAACTGGTCGGGCACGGAAATCTGGCCCGGATCGCTGGCCGGCGCGGTTCGTTACGCGCACGCCATGACCGGTCG TCCGGTGCTGGTCTCCGAACATGGCGTCGGCACCGATGACGATGCGGTGCGAGCTGCCCTCATTCCGCCAGCCCTCGGCG CGCTCAAGCAGGCGATGGACGATGGCGTGCCTGTCCTCGGCTATTGCCATTGGTCGCTGGTCGACAACTTCGAATGGATC TTCGGTTACAAGCCCCGTTTCGGCCTTGCCACCTTCGATCCCGTCACCTTCGAGCGCAAGGCGAAACCGAGTGCACGGGT CTATGGCGCGATAGCCAGGGCCAATGCCCTGACGGCGTGA
Upstream 100 bases:
>100_bases TTTCAAATCCATAGCTTGAGACAATGTTGCGCTCATAAGATGCTATTTTACCCGATGGACGGCCGGACATAAGTTCACCC GAAAGGCATTGGGAGAAATC
Downstream 100 bases:
>100_bases ATTCGAATTACCTGTGCGGCGCGGCGAGCTTGGTGCTAACCTTCGGCAATCGATTGCAATAAGCCGTATCCGGAGAGGCT GATGACCCGTTTTTCAACAG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MIDRRSVLAGSVALAATPALAGVKTRRHPDPVFPKGFLWGASTAPHQIEGNNTASDLWFLENQQPTVFAEPSGDAANSLL LWERDLDLARDIGLNTYRFGVEWARIEPEKGRFSQAMLDHYRRVVDGCRARGLVPIVTYSHFTAPRWFSAQGGWTNPESA ELFARYCTKVTQAIGDAIHSAITLNEPNILLILKPMLPQAVWDIQKLTLETAGRRLGVEKFVCANVAAFEDLPALQHGLL AAHKAGRAAIKAVRPALPVGVSIAMLDDQAVGRNSIRDRIRSELYGAWLDVAKADDFIGVQNYERALWGDKGRLPAPQDA PRNWSGTEIWPGSLAGAVRYAHAMTGRPVLVSEHGVGTDDDAVRAALIPPALGALKQAMDDGVPVLGYCHWSLVDNFEWI FGYKPRFGLATFDPVTFERKAKPSARVYGAIARANALTA
Sequences:
>Translated_439_residues MIDRRSVLAGSVALAATPALAGVKTRRHPDPVFPKGFLWGASTAPHQIEGNNTASDLWFLENQQPTVFAEPSGDAANSLL LWERDLDLARDIGLNTYRFGVEWARIEPEKGRFSQAMLDHYRRVVDGCRARGLVPIVTYSHFTAPRWFSAQGGWTNPESA ELFARYCTKVTQAIGDAIHSAITLNEPNILLILKPMLPQAVWDIQKLTLETAGRRLGVEKFVCANVAAFEDLPALQHGLL AAHKAGRAAIKAVRPALPVGVSIAMLDDQAVGRNSIRDRIRSELYGAWLDVAKADDFIGVQNYERALWGDKGRLPAPQDA PRNWSGTEIWPGSLAGAVRYAHAMTGRPVLVSEHGVGTDDDAVRAALIPPALGALKQAMDDGVPVLGYCHWSLVDNFEWI FGYKPRFGLATFDPVTFERKAKPSARVYGAIARANALTA >Mature_439_residues MIDRRSVLAGSVALAATPALAGVKTRRHPDPVFPKGFLWGASTAPHQIEGNNTASDLWFLENQQPTVFAEPSGDAANSLL LWERDLDLARDIGLNTYRFGVEWARIEPEKGRFSQAMLDHYRRVVDGCRARGLVPIVTYSHFTAPRWFSAQGGWTNPESA ELFARYCTKVTQAIGDAIHSAITLNEPNILLILKPMLPQAVWDIQKLTLETAGRRLGVEKFVCANVAAFEDLPALQHGLL AAHKAGRAAIKAVRPALPVGVSIAMLDDQAVGRNSIRDRIRSELYGAWLDVAKADDFIGVQNYERALWGDKGRLPAPQDA PRNWSGTEIWPGSLAGAVRYAHAMTGRPVLVSEHGVGTDDDAVRAALIPPALGALKQAMDDGVPVLGYCHWSLVDNFEWI FGYKPRFGLATFDPVTFERKAKPSARVYGAIARANALTA
Specific function: Unknown
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI13273313, Length=170, Percent_Identity=35.8823529411765, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI32481206, Length=169, Percent_Identity=33.1360946745562, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI110681710, Length=167, Percent_Identity=28.1437125748503, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI28376633, Length=169, Percent_Identity=28.9940828402367, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1789070, Length=183, Percent_Identity=27.8688524590164, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI2367270, Length=174, Percent_Identity=28.1609195402299, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17539390, Length=469, Percent_Identity=26.4392324093817, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17552856, Length=480, Percent_Identity=25.625, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21356577, Length=173, Percent_Identity=35.2601156069364, Blast_Score=101, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 47990; Mature: 47990
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRRSVLAGSVALAATPALAGVKTRRHPDPVFPKGFLWGASTAPHQIEGNNTASDLWFL CCCCHHHHHCCHHHHHCCHHHCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCEEEE ENQQPTVFAEPSGDAANSLLLWERDLDLARDIGLNTYRFGVEWARIEPEKGRFSQAMLDH ECCCCEEEECCCCCCCCEEEEEECCHHHHHHCCCCEEEECEEEEEECCCCCHHHHHHHHH YRRVVDGCRARGLVPIVTYSHFTAPRWFSAQGGWTNPESAELFARYCTKVTQAIGDAIHS HHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AITLNEPNILLILKPMLPQAVWDIQKLTLETAGRRLGVEKFVCANVAAFEDLPALQHGLL EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAHKAGRAAIKAVRPALPVGVSIAMLDDQAVGRNSIRDRIRSELYGAWLDVAKADDFIGV HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC QNYERALWGDKGRLPAPQDAPRNWSGTEIWPGSLAGAVRYAHAMTGRPVLVSEHGVGTDD CHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC DAVRAALIPPALGALKQAMDDGVPVLGYCHWSLVDNFEWIFGYKPRFGLATFDPVTFERK HHHEEHHCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCEEEEECCCCCCCCCCCCCCCCCC AKPSARVYGAIARANALTA CCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MIDRRSVLAGSVALAATPALAGVKTRRHPDPVFPKGFLWGASTAPHQIEGNNTASDLWFL CCCCHHHHHCCHHHHHCCHHHCCCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCEEEE ENQQPTVFAEPSGDAANSLLLWERDLDLARDIGLNTYRFGVEWARIEPEKGRFSQAMLDH ECCCCEEEECCCCCCCCEEEEEECCHHHHHHCCCCEEEECEEEEEECCCCCHHHHHHHHH YRRVVDGCRARGLVPIVTYSHFTAPRWFSAQGGWTNPESAELFARYCTKVTQAIGDAIHS HHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AITLNEPNILLILKPMLPQAVWDIQKLTLETAGRRLGVEKFVCANVAAFEDLPALQHGLL EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAHKAGRAAIKAVRPALPVGVSIAMLDDQAVGRNSIRDRIRSELYGAWLDVAKADDFIGV HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC QNYERALWGDKGRLPAPQDAPRNWSGTEIWPGSLAGAVRYAHAMTGRPVLVSEHGVGTDD CHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCC DAVRAALIPPALGALKQAMDDGVPVLGYCHWSLVDNFEWIFGYKPRFGLATFDPVTFERK HHHEEHHCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCEEEEECCCCCCCCCCCCCCCCCC AKPSARVYGAIARANALTA CCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]