Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is gltT [H]
Identifier: 87198507
GI number: 87198507
Start: 524457
End: 525746
Strand: Direct
Name: gltT [H]
Synonym: Saro_0482
Alternate gene names: 87198507
Gene position: 524457-525746 (Clockwise)
Preceding gene: 87198503
Following gene: 87198508
Centisome position: 14.73
GC content: 69.3
Gene sequence:
>1290_bases ATGAAACAATCCGAACTTGCCACGAGCGACCAGGCGCCGGCCGCGCCGCCGATTTCCACGATCCGCGCCGGGTGGATCTT TGCCGCGCTGGTGGGCGGGCTGGCGCTGGGCCTTGGACTGGCCTTCGCAGCGCCAGCCGCGCTGGAGTCGGTGCTGCTGG TGGTGGAGCCCATCGGCAATCTCTGGTTGCAGGCCTTGCGTGGGACGATCGTTCCGCTGGTTGTCGCCCTGCTGTTTACC GGCATCGTGCAGACGGTGGCGGCAGCGCGGGCTGGCGCCCTTGCGCGGCGGGCGCTGCTGTTCTTCGCGTCGGTGCTGGC GGGCGGGTGCGCAATGGCCGCGGTGCTGGTGCCCGCGATGCTGGCCGCGTTCCCGATGCCCCAGGCGGCGGCGGATGCGC TGCGACAGGGCGTAGCGCAGATTCACGACAAGGCGGACGTGCCGGGCTTTGCCGCGTTCCTCCAATCCATAGTGCCCGCC AACGTGCTGCAATCGGCCGCGTCCGACCAGATCCTGCCGGTGATCCTGTTCACGTCGGTCTTCGCGCTGGCGGCGACGCG GCTGACCGATGTGCAGCGCCGGACGCTTGCGACGTTCTTCGAGGCGACCGCCAATGCGATGCTGGTGGTGATCGGATGGG TCCTGCTGGCCGCGCCGGTCGGCGTGTTCTGCCTTAGCCTTGCCGTCGCCGCGCATAGCGGCACGGCGGCGATCGGGGCG CTGGCGCATTATGTGCTGGTGGTGACGGCGGCGGGTGTCGTTGTCTTTCTTGCGGCTTACGCCGTGGCCGTCGTGGCGGC ACGGCAGCCTTTCGGGCGGTTCGCCCGCGCGATGTTGCCCGCACAGGCGCTGGCGCTTTCGACGCAATCGTCGCTGGCGA CCTTGCCCGCGATGCTCGGCGTGTGCCGTACGCTTGGTGTGCGGGCGCAGACTGCCGATCTGGTACTGCCGCTGGCCGTC GCCCTGTTCCGCGCGACGGGGCCGGCGATGAACCTCGCGGTGGCGATCTACGTGGCGCACTGGTTCGGGATGGAACTGAC GCCCTCGATGCTCGTCGCGGGGTTTGCAGTCGCGACCCTGACCACGCTGGGCGCGGTCAGCCTGCCCGGGGCAATCAGCT TCGTGACCTCCATCGGCCCCATTGCAATTGCGATGGGTGTCCCGGTCGAACCGCTGGCGCTGCTGGTTGCGGTCGAGGTC TTGCCCGACCTCATGCGTACCTTGGGTAACGTGACCATGGACGTTGCCGTCACTGCGGCGGTCGACCGCGCCCACGGGCC CGGCGAGTAG
Upstream 100 bases:
>100_bases GCCATCGGTGCCGAAGAACTTGCGTGCCATGAAACGTCCCGTGCCTGTTTGCGCTGCAATGCGTTGCATTGCCCGCCTAC ACCAATATTGTCACCAGCGC
Downstream 100 bases:
>100_bases CGTTTACTGCAACTGCCTTTCCGAAAATTTCAACGCAAAATCAGTACGTAACGGCTCTATCTGGCGCAACCGGCGCGCGC CTTGCGCGTTGGTATGCGAA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKQSELATSDQAPAAPPISTIRAGWIFAALVGGLALGLGLAFAAPAALESVLLVVEPIGNLWLQALRGTIVPLVVALLFT GIVQTVAAARAGALARRALLFFASVLAGGCAMAAVLVPAMLAAFPMPQAAADALRQGVAQIHDKADVPGFAAFLQSIVPA NVLQSAASDQILPVILFTSVFALAATRLTDVQRRTLATFFEATANAMLVVIGWVLLAAPVGVFCLSLAVAAHSGTAAIGA LAHYVLVVTAAGVVVFLAAYAVAVVAARQPFGRFARAMLPAQALALSTQSSLATLPAMLGVCRTLGVRAQTADLVLPLAV ALFRATGPAMNLAVAIYVAHWFGMELTPSMLVAGFAVATLTTLGAVSLPGAISFVTSIGPIAIAMGVPVEPLALLVAVEV LPDLMRTLGNVTMDVAVTAAVDRAHGPGE
Sequences:
>Translated_429_residues MKQSELATSDQAPAAPPISTIRAGWIFAALVGGLALGLGLAFAAPAALESVLLVVEPIGNLWLQALRGTIVPLVVALLFT GIVQTVAAARAGALARRALLFFASVLAGGCAMAAVLVPAMLAAFPMPQAAADALRQGVAQIHDKADVPGFAAFLQSIVPA NVLQSAASDQILPVILFTSVFALAATRLTDVQRRTLATFFEATANAMLVVIGWVLLAAPVGVFCLSLAVAAHSGTAAIGA LAHYVLVVTAAGVVVFLAAYAVAVVAARQPFGRFARAMLPAQALALSTQSSLATLPAMLGVCRTLGVRAQTADLVLPLAV ALFRATGPAMNLAVAIYVAHWFGMELTPSMLVAGFAVATLTTLGAVSLPGAISFVTSIGPIAIAMGVPVEPLALLVAVEV LPDLMRTLGNVTMDVAVTAAVDRAHGPGE >Mature_429_residues MKQSELATSDQAPAAPPISTIRAGWIFAALVGGLALGLGLAFAAPAALESVLLVVEPIGNLWLQALRGTIVPLVVALLFT GIVQTVAAARAGALARRALLFFASVLAGGCAMAAVLVPAMLAAFPMPQAAADALRQGVAQIHDKADVPGFAAFLQSIVPA NVLQSAASDQILPVILFTSVFALAATRLTDVQRRTLATFFEATANAMLVVIGWVLLAAPVGVFCLSLAVAAHSGTAAIGA LAHYVLVVTAAGVVVFLAAYAVAVVAARQPFGRFARAMLPAQALALSTQSSLATLPAMLGVCRTLGVRAQTADLVLPLAV ALFRATGPAMNLAVAIYVAHWFGMELTPSMLVAGFAVATLTTLGAVSLPGAISFVTSIGPIAIAMGVPVEPLALLVAVEV LPDLMRTLGNVTMDVAVTAAVDRAHGPGE
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=403, Percent_Identity=25.0620347394541, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI4827012, Length=266, Percent_Identity=30.4511278195489, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI40254478, Length=252, Percent_Identity=30.952380952381, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790514, Length=394, Percent_Identity=26.6497461928934, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789947, Length=386, Percent_Identity=24.8704663212435, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71996953, Length=444, Percent_Identity=25, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537407, Length=394, Percent_Identity=24.3654822335025, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983099, Length=434, Percent_Identity=26.036866359447, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71983106, Length=434, Percent_Identity=26.036866359447, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24583025, Length=446, Percent_Identity=22.4215246636771, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI17137668, Length=446, Percent_Identity=22.4215246636771, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24583023, Length=446, Percent_Identity=22.4215246636771, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43526; Mature: 43526
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSELATSDQAPAAPPISTIRAGWIFAALVGGLALGLGLAFAAPAALESVLLVVEPIGN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLQALRGTIVPLVVALLFTGIVQTVAAARAGALARRALLFFASVLAGGCAMAAVLVPAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAFPMPQAAADALRQGVAQIHDKADVPGFAAFLQSIVPANVLQSAASDQILPVILFTSV HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FALAATRLTDVQRRTLATFFEATANAMLVVIGWVLLAAPVGVFCLSLAVAAHSGTAAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAHYVLVVTAAGVVVFLAAYAVAVVAARQPFGRFARAMLPAQALALSTQSSLATLPAMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCRTLGVRAQTADLVLPLAVALFRATGPAMNLAVAIYVAHWFGMELTPSMLVAGFAVATL HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TTLGAVSLPGAISFVTSIGPIAIAMGVPVEPLALLVAVEVLPDLMRTLGNVTMDVAVTAA HHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VDRAHGPGE HHCCCCCCC >Mature Secondary Structure MKQSELATSDQAPAAPPISTIRAGWIFAALVGGLALGLGLAFAAPAALESVLLVVEPIGN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLQALRGTIVPLVVALLFTGIVQTVAAARAGALARRALLFFASVLAGGCAMAAVLVPAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAFPMPQAAADALRQGVAQIHDKADVPGFAAFLQSIVPANVLQSAASDQILPVILFTSV HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FALAATRLTDVQRRTLATFFEATANAMLVVIGWVLLAAPVGVFCLSLAVAAHSGTAAIGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAHYVLVVTAAGVVVFLAAYAVAVVAARQPFGRFARAMLPAQALALSTQSSLATLPAMLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCRTLGVRAQTADLVLPLAVALFRATGPAMNLAVAIYVAHWFGMELTPSMLVAGFAVATL HHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TTLGAVSLPGAISFVTSIGPIAIAMGVPVEPLALLVAVEVLPDLMRTLGNVTMDVAVTAA HHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VDRAHGPGE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]