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The map label for this gene is ywnB [H]

Identifier: 87198495

GI number: 87198495

Start: 513332

End: 513940

Strand: Direct

Name: ywnB [H]

Synonym: Saro_0470

Alternate gene names: 87198495

Gene position: 513332-513940 (Clockwise)

Preceding gene: 87198493

Following gene: 87198501

Centisome position: 14.41

GC content: 69.62

Gene sequence:

>609_bases
ATGAAAGTAGCCGTTCTGGGCGCCAGCGGCCGCGCGGGGTCGGAGATCACGGCGGAACTCGCGCGGCGCGGCCACGAGGT
CGTCGCCATCGCGCGCAAGCCGGAGGCGATCGCGGCCGCGCCGGGCGTCACGGCGGTGCAGGGCGACGCATCGGACCCGC
AGGCCCTGGCCGCGCTGATCCGGGGCAGCGATGCCGTGATCAGCGCGCTTCACTTCGACGTGAAGGCCGAGACGCTGCTC
TCCGCGCTCAAGGCCGCAGGCGTGCCCCGGTTGCTGGTGACTGGCGGGGCGGCCAGCCTCGAGGTTGCGCCCGGCAAGAT
CCTGTTCGATGCGATGGACCTGCCCGACGAATGGAAGCCGGCGATCCTGGGCGGCATCGCGTTCCTCAAGGACCTGCGGT
CCGAGACCGAAATCGACTGGACGTTCTTCTCGCCCGCCGCCTTCATCGAGGTCGGCCCGCGTACCGGCACGTTCCGGCTG
GGGACCGACCAGCTTGTCGTCGACGACAAGGGCGAGAGCCGGATCAGCTTTGCCGACTATGCCATCGCGATGGTCGACGA
ACTGGAACAGCATCGCCACCCGAGGGCGCGGTTCACCGCAGCGTACTGA

Upstream 100 bases:

>100_bases
GGTCACTTCACGGTGACCTGGTATCGAAATCGTGCCTTCTTGCATGGGCAGGGTCGATAGCGCACCTGGTATCCATTGGA
AACCACTGATGGAGAATCGC

Downstream 100 bases:

>100_bases
ACTCTCATACCGACTGGCACATACCGACAGGCGCTATGCCGCGCAGGCCTTGTCCATGATGGCAGCGCCGAGCGTATCGG
GTTCGACCGGCAGGTACTGG

Product: TrkA-N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKVAVLGASGRAGSEITAELARRGHEVVAIARKPEAIAAAPGVTAVQGDASDPQALAALIRGSDAVISALHFDVKAETLL
SALKAAGVPRLLVTGGAASLEVAPGKILFDAMDLPDEWKPAILGGIAFLKDLRSETEIDWTFFSPAAFIEVGPRTGTFRL
GTDQLVVDDKGESRISFADYAIAMVDELEQHRHPRARFTAAY

Sequences:

>Translated_202_residues
MKVAVLGASGRAGSEITAELARRGHEVVAIARKPEAIAAAPGVTAVQGDASDPQALAALIRGSDAVISALHFDVKAETLL
SALKAAGVPRLLVTGGAASLEVAPGKILFDAMDLPDEWKPAILGGIAFLKDLRSETEIDWTFFSPAAFIEVGPRTGTFRL
GTDQLVVDDKGESRISFADYAIAMVDELEQHRHPRARFTAAY
>Mature_202_residues
MKVAVLGASGRAGSEITAELARRGHEVVAIARKPEAIAAAPGVTAVQGDASDPQALAALIRGSDAVISALHFDVKAETLL
SALKAAGVPRLLVTGGAASLEVAPGKILFDAMDLPDEWKPAILGGIAFLKDLRSETEIDWTFFSPAAFIEVGPRTGTFRL
GTDQLVVDDKGESRISFADYAIAMVDELEQHRHPRARFTAAY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 21306; Mature: 21306

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAVLGASGRAGSEITAELARRGHEVVAIARKPEAIAAAPGVTAVQGDASDPQALAALI
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCEEECCCCEEEECCCCCHHHHHHHH
RGSDAVISALHFDVKAETLLSALKAAGVPRLLVTGGAASLEVAPGKILFDAMDLPDEWKP
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEEEECCCCCCCCH
AILGGIAFLKDLRSETEIDWTFFSPAAFIEVGPRTGTFRLGTDQLVVDDKGESRISFADY
HHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEECCCEEEEECCCCCEEEHHHH
AIAMVDELEQHRHPRARFTAAY
HHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MKVAVLGASGRAGSEITAELARRGHEVVAIARKPEAIAAAPGVTAVQGDASDPQALAALI
CEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCEEECCCCEEEECCCCCHHHHHHHH
RGSDAVISALHFDVKAETLLSALKAAGVPRLLVTGGAASLEVAPGKILFDAMDLPDEWKP
CCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEEEECCCCCCCCH
AILGGIAFLKDLRSETEIDWTFFSPAAFIEVGPRTGTFRLGTDQLVVDDKGESRISFADY
HHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCEEEECCCEEEEECCCCCEEEHHHH
AIAMVDELEQHRHPRARFTAAY
HHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]