Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is pabB [H]
Identifier: 87198470
GI number: 87198470
Start: 487393
End: 489180
Strand: Direct
Name: pabB [H]
Synonym: Saro_0445
Alternate gene names: 87198470
Gene position: 487393-489180 (Clockwise)
Preceding gene: 87198468
Following gene: 87198471
Centisome position: 13.68
GC content: 68.74
Gene sequence:
>1788_bases ATGACCCGTGCTCCCTTCATCCTGCTCGACGACGCCCGCAGCGAGGGCGCGAGTGATGCGCGCCTCTACGAGGACGCCGT CGAGATCGTCGTCGCGCGCCGCGCCGAGGAGGTCGAGGCCGCGCTTGAACGGATCGCGGCTGTCCCCGGCAACTGGGCAG GCTACCTCGCCTACGAGGCGGGCCTCGCGCTCGAACCGCGTCTCTTGCCGCTGGCGGCGGTGCGAACCGGTGCTGACGGC CCGTTGGTGTGGTTCGCGCGCTTCGACCGCGTCACCCGGATGCCGAGCGCGGAGGTCGAGCAGTGGCTGGTGCGCAATGC GCGCGGCCCCGGGCGCCTCGGTCCGCTCGGCCCTGCGCTGTCGTCGGGCGGCTATGCCCGCGCCTTCGACCTGGTGCAGG AGGCGATCCGCGCGGGCGACATCTACCAGGCGAACCTGACCTTCCCGCTGACCGGCACCTGGGATGGCGATCCGCTGTCG ATCTACGGCGAAGTGCGCCGCGATGCGCGCGCGGGCTATGGCGGCGTGATATGGGACGGCGCGCATTGGCACCTCTCGTT CTCGCCCGAACTCTTCTTCAAGCTTTCCGGCGGAGAAGCGCGGGTGCGCCCGATGAAGGGCACTGCCCCGCGCGGGGCAA CCCCCGAAGAGGACGCGCGCTTCAAGGCCGACCTCTCCGCCAGTGTAAAAGACCGCGCCGAAAACCTGATGATCGTCGAT CTCATGCGAAACGATCTCGCGCGCGTTTCACAGGCCGGGTCGGTCAAGGTCGAGGCGCCCTTCGCCATCGAATCCTATCC TACCGTCCACCAGATGGTCACCACCGTGCGCGCCAGGCTTGCCCCCGGCGAGGACGTGCGCAGCCTCCTGCGCGCGATCT TCCCCTGCGGTTCGATCACCGGAGCGCCCAAGATCCGCGCGATGGAGATCATCCATGCCGCAGAACGGGACGCGCGCGGG CTCTATTGCGGCTCGATCGGACGGATCGACCCCACTGGCGAGGCGGCGTTCAATGTGGCAATCCGCACGCTGCGTCTTTC GAGCGATCACGCCGGGGCCTCCGGGGGCCGCGCGGTCATGGGCGTCGGCTCTGCGGTCGTTGCCGATTCGGCCATGATCG GCGAATGGCGGGAATGCGTGGTGAAGGGGAATTTCTTGCGTCTGTCCGCCGGCCATGCCGACCTTATCGAGACCATGGCC TTCGATCCGGCCAAGGGTATCGAACTGCTCGAACTGCACCTCGAACGCATGAAGGCCAGTGCGCTTGCGCTAGGCTACAG CTTCGACCGGCACGCGGTGCGCAATGCGATCCATGCGCTTTGCTTCGATCTCGACGCGCCCTCGCGGGTCCGGCTCGTCG TGTCGAAGGGGGGCGCCCATGCGCTCGATGCCTCGGCCATGCCGGCGCCGATCGAAAGCCTGACCTGCGCGGTGCTCTCG CTTCCGGTGTCGGACGGCGACTGGCGCCTGCGCCACAAGACCACGGACCGCGCCTTCTACGAGGCGGGCCTGTCCGCCGC GAAACGGGCGGGCGCCGGTGAGGCCCTGTTCCTGCGCGACGATGGCTTCCTTACCGAAGGCACGTTCACCAACATCTTCG TCGAGCGCGATGGCATTCTGCTCACCCCCCGCGCCGAACTCGGCCTGCTTCCCGGCGTACTGCGCCGAAGCCTGATCGAG GCCGGACGTGCGGTCGAGGCGGACCTGACGCTCGATGACCTTGCCGGCGGCTTCCTCGTCGGCAACGCGCTGCGCGGCCT CATCCCGGCTCGCCTGCTTGGCGCCTGA
Upstream 100 bases:
>100_bases TGGCCCGAGACCAGTTGGCCCGAGACTAGGCCGCAGCCTTGTCCCTTGCGAGGGGTTTTTGCATCCGGAGCGGGTAACGG CTAGAGCGCGCAGGAACGCC
Downstream 100 bases:
>100_bases CATCATGAACCAGCTCTCCCGGGCGCTTGCGCGCATCGCTCCTTCCCGTACCACCGCTATCACCGACCGCGCGATCCAGC TTCGCGCCGAAGGCCGCGAC
Product: para-aminobenzoate synthase, component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MTRAPFILLDDARSEGASDARLYEDAVEIVVARRAEEVEAALERIAAVPGNWAGYLAYEAGLALEPRLLPLAAVRTGADG PLVWFARFDRVTRMPSAEVEQWLVRNARGPGRLGPLGPALSSGGYARAFDLVQEAIRAGDIYQANLTFPLTGTWDGDPLS IYGEVRRDARAGYGGVIWDGAHWHLSFSPELFFKLSGGEARVRPMKGTAPRGATPEEDARFKADLSASVKDRAENLMIVD LMRNDLARVSQAGSVKVEAPFAIESYPTVHQMVTTVRARLAPGEDVRSLLRAIFPCGSITGAPKIRAMEIIHAAERDARG LYCGSIGRIDPTGEAAFNVAIRTLRLSSDHAGASGGRAVMGVGSAVVADSAMIGEWRECVVKGNFLRLSAGHADLIETMA FDPAKGIELLELHLERMKASALALGYSFDRHAVRNAIHALCFDLDAPSRVRLVVSKGGAHALDASAMPAPIESLTCAVLS LPVSDGDWRLRHKTTDRAFYEAGLSAAKRAGAGEALFLRDDGFLTEGTFTNIFVERDGILLTPRAELGLLPGVLRRSLIE AGRAVEADLTLDDLAGGFLVGNALRGLIPARLLGA
Sequences:
>Translated_595_residues MTRAPFILLDDARSEGASDARLYEDAVEIVVARRAEEVEAALERIAAVPGNWAGYLAYEAGLALEPRLLPLAAVRTGADG PLVWFARFDRVTRMPSAEVEQWLVRNARGPGRLGPLGPALSSGGYARAFDLVQEAIRAGDIYQANLTFPLTGTWDGDPLS IYGEVRRDARAGYGGVIWDGAHWHLSFSPELFFKLSGGEARVRPMKGTAPRGATPEEDARFKADLSASVKDRAENLMIVD LMRNDLARVSQAGSVKVEAPFAIESYPTVHQMVTTVRARLAPGEDVRSLLRAIFPCGSITGAPKIRAMEIIHAAERDARG LYCGSIGRIDPTGEAAFNVAIRTLRLSSDHAGASGGRAVMGVGSAVVADSAMIGEWRECVVKGNFLRLSAGHADLIETMA FDPAKGIELLELHLERMKASALALGYSFDRHAVRNAIHALCFDLDAPSRVRLVVSKGGAHALDASAMPAPIESLTCAVLS LPVSDGDWRLRHKTTDRAFYEAGLSAAKRAGAGEALFLRDDGFLTEGTFTNIFVERDGILLTPRAELGLLPGVLRRSLIE AGRAVEADLTLDDLAGGFLVGNALRGLIPARLLGA >Mature_594_residues TRAPFILLDDARSEGASDARLYEDAVEIVVARRAEEVEAALERIAAVPGNWAGYLAYEAGLALEPRLLPLAAVRTGADGP LVWFARFDRVTRMPSAEVEQWLVRNARGPGRLGPLGPALSSGGYARAFDLVQEAIRAGDIYQANLTFPLTGTWDGDPLSI YGEVRRDARAGYGGVIWDGAHWHLSFSPELFFKLSGGEARVRPMKGTAPRGATPEEDARFKADLSASVKDRAENLMIVDL MRNDLARVSQAGSVKVEAPFAIESYPTVHQMVTTVRARLAPGEDVRSLLRAIFPCGSITGAPKIRAMEIIHAAERDARGL YCGSIGRIDPTGEAAFNVAIRTLRLSSDHAGASGGRAVMGVGSAVVADSAMIGEWRECVVKGNFLRLSAGHADLIETMAF DPAKGIELLELHLERMKASALALGYSFDRHAVRNAIHALCFDLDAPSRVRLVVSKGGAHALDASAMPAPIESLTCAVLSL PVSDGDWRLRHKTTDRAFYEAGLSAAKRAGAGEALFLRDDGFLTEGTFTNIFVERDGILLTPRAELGLLPGVLRRSLIEA GRAVEADLTLDDLAGGFLVGNALRGLIPARLLGA
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=265, Percent_Identity=41.8867924528302, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI1787518, Length=268, Percent_Identity=30.9701492537313, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1786809, Length=195, Percent_Identity=26.1538461538462, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=277, Percent_Identity=32.129963898917, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324361, Length=286, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 63752; Mature: 63620
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAPFILLDDARSEGASDARLYEDAVEIVVARRAEEVEAALERIAAVPGNWAGYLAYEA CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GLALEPRLLPLAAVRTGADGPLVWFARFDRVTRMPSAEVEQWLVRNARGPGRLGPLGPAL CCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC SSGGYARAFDLVQEAIRAGDIYQANLTFPLTGTWDGDPLSIYGEVRRDARAGYGGVIWDG CCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEECC AHWHLSFSPELFFKLSGGEARVRPMKGTAPRGATPEEDARFKADLSASVKDRAENLMIVD EEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHCCCEEEEH LMRNDLARVSQAGSVKVEAPFAIESYPTVHQMVTTVRARLAPGEDVRSLLRAIFPCGSIT HHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GAPKIRAMEIIHAAERDARGLYCGSIGRIDPTGEAAFNVAIRTLRLSSDHAGASGGRAVM CCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCEEEE GVGSAVVADSAMIGEWRECVVKGNFLRLSAGHADLIETMAFDPAKGIELLELHLERMKAS ECCCHHHHCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALALGYSFDRHAVRNAIHALCFDLDAPSRVRLVVSKGGAHALDASAMPAPIESLTCAVLS HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHEEEEEE LPVSDGDWRLRHKTTDRAFYEAGLSAAKRAGAGEALFLRDDGFLTEGTFTNIFVERDGIL EECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEEEEECCCEE LTPRAELGLLPGVLRRSLIEAGRAVEADLTLDDLAGGFLVGNALRGLIPARLLGA ECCCHHHCCCHHHHHHHHHHCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRAPFILLDDARSEGASDARLYEDAVEIVVARRAEEVEAALERIAAVPGNWAGYLAYEA CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GLALEPRLLPLAAVRTGADGPLVWFARFDRVTRMPSAEVEQWLVRNARGPGRLGPLGPAL CCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCC SSGGYARAFDLVQEAIRAGDIYQANLTFPLTGTWDGDPLSIYGEVRRDARAGYGGVIWDG CCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEECC AHWHLSFSPELFFKLSGGEARVRPMKGTAPRGATPEEDARFKADLSASVKDRAENLMIVD EEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHCCCEEEEH LMRNDLARVSQAGSVKVEAPFAIESYPTVHQMVTTVRARLAPGEDVRSLLRAIFPCGSIT HHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC GAPKIRAMEIIHAAERDARGLYCGSIGRIDPTGEAAFNVAIRTLRLSSDHAGASGGRAVM CCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCEEEE GVGSAVVADSAMIGEWRECVVKGNFLRLSAGHADLIETMAFDPAKGIELLELHLERMKAS ECCCHHHHCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH ALALGYSFDRHAVRNAIHALCFDLDAPSRVRLVVSKGGAHALDASAMPAPIESLTCAVLS HHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEECCCCCCCCHHHHEEEEEE LPVSDGDWRLRHKTTDRAFYEAGLSAAKRAGAGEALFLRDDGFLTEGTFTNIFVERDGIL EECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEEEEECCCEE LTPRAELGLLPGVLRRSLIEAGRAVEADLTLDDLAGGFLVGNALRGLIPARLLGA ECCCHHHCCCHHHHHHHHHHCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]