Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198439
Identifier: 87198439
GI number: 87198439
Start: 454077
End: 454475
Strand: Direct
Name: 87198439
Synonym: Saro_0414
Alternate gene names: NA
Gene position: 454077-454475 (Clockwise)
Preceding gene: 87198438
Following gene: 87198440
Centisome position: 12.75
GC content: 67.92
Gene sequence:
>399_bases GTGCCCTATGCCTGCCACTGCCACGGCTGCCAGCGGCGGCAGGGCACGTCCTTCGCGCTCAACCAGCAGGTTCTTCTTGC GGGGTTTGTCGCGGAGGGAGAGGTCCTCGTATCGGAGGTCGAAGGCCACGGCGGAGCGCGGGTCGCGCATCACGCCTGCC CCCGTTGCCTGACGCGGGTCTGGACCGTGAACGACCAGCGCCCCGAAGTCGCCACCATCCGCACCGGCACCCGCGACGAC AGTCCCGACCTCGTCCCCGCCTTCCACATCTGGACCTCCAGGATGCAGCCGTGGATCGCGCTTCCCGAAGGCGCCGTCCA TTTCGCGCAGCAGCCCGAAAGTCGCGAGGAGTGGATGAACCTTGTCCTGCCCGAAGGTTTGCGCGAGCATCCGCGTTAG
Upstream 100 bases:
>100_bases GTCTTACGGTGGGCGGTACGGCGTGACCGAGGCGGGCGCGGAGATCACCGGGGGATGCCCCTGCGGTGCCCTCCGCTACC GCGCCGCCTAACACGGATTC
Downstream 100 bases:
>100_bases GCAGTCAGCACGGGTTCAGCCGGCCCGCGCTATCGATCAGGGATCGAATCGAAAGGAAGTGGCAGCCATGAAGAGAACCG CGAGCATCCTTGCCGCCGCG
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MPYACHCHGCQRRQGTSFALNQQVLLAGFVAEGEVLVSEVEGHGGARVAHHACPRCLTRVWTVNDQRPEVATIRTGTRDD SPDLVPAFHIWTSRMQPWIALPEGAVHFAQQPESREEWMNLVLPEGLREHPR
Sequences:
>Translated_132_residues MPYACHCHGCQRRQGTSFALNQQVLLAGFVAEGEVLVSEVEGHGGARVAHHACPRCLTRVWTVNDQRPEVATIRTGTRDD SPDLVPAFHIWTSRMQPWIALPEGAVHFAQQPESREEWMNLVLPEGLREHPR >Mature_131_residues PYACHCHGCQRRQGTSFALNQQVLLAGFVAEGEVLVSEVEGHGGARVAHHACPRCLTRVWTVNDQRPEVATIRTGTRDDS PDLVPAFHIWTSRMQPWIALPEGAVHFAQQPESREEWMNLVLPEGLREHPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14842; Mature: 14711
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYACHCHGCQRRQGTSFALNQQVLLAGFVAEGEVLVSEVEGHGGARVAHHACPRCLTRV CCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHH WTVNDQRPEVATIRTGTRDDSPDLVPAFHIWTSRMQPWIALPEGAVHFAQQPESREEWMN HCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHCCCCCCHHHHHH LVLPEGLREHPR HHCCCCCCCCCC >Mature Secondary Structure PYACHCHGCQRRQGTSFALNQQVLLAGFVAEGEVLVSEVEGHGGARVAHHACPRCLTRV CCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHH WTVNDQRPEVATIRTGTRDDSPDLVPAFHIWTSRMQPWIALPEGAVHFAQQPESREEWMN HCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHCCCCCCHHHHHH LVLPEGLREHPR HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA