Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198429

Identifier: 87198429

GI number: 87198429

Start: 443284

End: 443673

Strand: Direct

Name: 87198429

Synonym: Saro_0404

Alternate gene names: NA

Gene position: 443284-443673 (Clockwise)

Preceding gene: 87198428

Following gene: 87198431

Centisome position: 12.45

GC content: 55.38

Gene sequence:

>390_bases
ATGTCTTATTACTTCTCGAAAACCGTCAGCGCGCCATTGGATGAAACTGTCACTCAGGTCCGAAATGCGCTGGCTGATCA
GGGCTTCGGGGTGATTACCGATATCGACATGGCAAAGACTCTCCGTGACAAAATCGACGTCGAATTCAGACCATATCGAA
TTCTCGGCGCTTGCAACCCGAAGCTGGCCTATGAAGCCCTGCAGGTGGAGGACAAGGTGGGGACTATGCTGCCGTGCAAT
GTCATCGTTCAGGAGTTCGCTCCGGGACGCTGCGAGGTCGCTGCAATCGATCCGGTCGCTTCGATGTCTGCCATCGACAA
CCCGGCCCTCCAATCAGCCGCGCAAGCGGTGCAACAGCGGTTACGCTTGGTAATCGAAGCAATTGGCTAG

Upstream 100 bases:

>100_bases
GACCGCCCGGATAGCTCTGCCGAGCCGGAGTCCGGAACCAAGGCGCAGCGGGATATTGCTGGGAAGACAGTGATTATTTG
ATCAGCACGGAGCAACTGCG

Downstream 100 bases:

>100_bases
CTGGTTGTCGCGCTGCTCAGAATGGGAAAAACCAGTGAATCGCCGCAACAGCGACGACCCAGGTCACCAGGTTCAACGGT
AGCCCGACCTTGACGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSYYFSKTVSAPLDETVTQVRNALADQGFGVITDIDMAKTLRDKIDVEFRPYRILGACNPKLAYEALQVEDKVGTMLPCN
VIVQEFAPGRCEVAAIDPVASMSAIDNPALQSAAQAVQQRLRLVIEAIG

Sequences:

>Translated_129_residues
MSYYFSKTVSAPLDETVTQVRNALADQGFGVITDIDMAKTLRDKIDVEFRPYRILGACNPKLAYEALQVEDKVGTMLPCN
VIVQEFAPGRCEVAAIDPVASMSAIDNPALQSAAQAVQQRLRLVIEAIG
>Mature_128_residues
SYYFSKTVSAPLDETVTQVRNALADQGFGVITDIDMAKTLRDKIDVEFRPYRILGACNPKLAYEALQVEDKVGTMLPCNV
IVQEFAPGRCEVAAIDPVASMSAIDNPALQSAAQAVQQRLRLVIEAIG

Specific function: Unknown

COG id: COG3439

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14047; Mature: 13916

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYFSKTVSAPLDETVTQVRNALADQGFGVITDIDMAKTLRDKIDVEFRPYRILGACNP
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCH
KLAYEALQVEDKVGTMLPCNVIVQEFAPGRCEVAAIDPVASMSAIDNPALQSAAQAVQQR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
LRLVIEAIG
HHHHHHHCC
>Mature Secondary Structure 
SYYFSKTVSAPLDETVTQVRNALADQGFGVITDIDMAKTLRDKIDVEFRPYRILGACNP
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCH
KLAYEALQVEDKVGTMLPCNVIVQEFAPGRCEVAAIDPVASMSAIDNPALQSAAQAVQQR
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
LRLVIEAIG
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA