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The map label for this gene is omp16 [H]

Identifier: 87198413

GI number: 87198413

Start: 426165

End: 426689

Strand: Direct

Name: omp16 [H]

Synonym: Saro_0388

Alternate gene names: 87198413

Gene position: 426165-426689 (Clockwise)

Preceding gene: 87198410

Following gene: 87198414

Centisome position: 11.97

GC content: 66.48

Gene sequence:

>525_bases
ATGAAGCGTACGCTTGCCCTTGCACTCCTCGCCTCCGGTGCGCTGGCCCTTTCCGCCTGCGGCCAGAAGCGCGCCCCTGA
ATCGCTCCCGCCCGAGCCTGGCCCGCAGGCGCCCGTGGCTGCCAATAACGGAGATTACGACGCCAACGGCAACTATATCG
GTCCGGGCAGCCAGGCCGACCTGCGGCGCACGGCCGGCAGCGACCGGGTCTTCTTCGATTTCGATTCCTATGGTCTCGAC
GATACCGACCGGGCGACCCTTACCCGCCAGGCTTCCTGGCTGGCGCAGTATCCGAACGTGAATGTCACGATCGAGGGCCA
TGCCGACGAACGCGGCACCCGGGACTATAACCTTGCGCTGGGCGAACGGCGCGCCAACGCCGCGAAGAACTTCCTGGCTT
CACTCGGAGTCGCAACGACCCGCATGTCGGTGGTCTCCTACGGCAAGGAGCGTCCGGAGGCGCTGGGTTCGGATGAGCAG
TCCTGGGCCCAGAACCGCCGCGCGGTCACGATGGTGATCCGCTGA

Upstream 100 bases:

>100_bases
TGCGCGCCGCCGGGCAGCGTCCATGCATAAAAAACCTATAATACCGGCCGCCGGCAAGCTGGGCTAGTTCTTCGCCAAGT
AACGGACAGGAGATCCACCC

Downstream 100 bases:

>100_bases
AATCGCCGGGCTGCGCATGGCCACGGCGATGAACAGCAGCACAGAGCGCGCCTTCCGGAGAGCAAGAGAAATCCTGCGCA
AGGAAGGCGCGCTCAACTCC

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRTLALALLASGALALSACGQKRAPESLPPEPGPQAPVAANNGDYDANGNYIGPGSQADLRRTAGSDRVFFDFDSYGLD
DTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLALGERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDEQ
SWAQNRRAVTMVIR

Sequences:

>Translated_174_residues
MKRTLALALLASGALALSACGQKRAPESLPPEPGPQAPVAANNGDYDANGNYIGPGSQADLRRTAGSDRVFFDFDSYGLD
DTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLALGERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDEQ
SWAQNRRAVTMVIR
>Mature_174_residues
MKRTLALALLASGALALSACGQKRAPESLPPEPGPQAPVAANNGDYDANGNYIGPGSQADLRRTAGSDRVFFDFDSYGLD
DTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLALGERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDEQ
SWAQNRRAVTMVIR

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=178, Percent_Identity=36.5168539325843, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18732; Mature: 18732

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLALALLASGALALSACGQKRAPESLPPEPGPQAPVAANNGDYDANGNYIGPGSQAD
CCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCHH
LRRTAGSDRVFFDFDSYGLDDTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLAL
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEC
GERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDEQSWAQNRRAVTMVIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MKRTLALALLASGALALSACGQKRAPESLPPEPGPQAPVAANNGDYDANGNYIGPGSQAD
CCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCHH
LRRTAGSDRVFFDFDSYGLDDTDRATLTRQASWLAQYPNVNVTIEGHADERGTRDYNLAL
HHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEC
GERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDEQSWAQNRRAVTMVIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]